RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 GTPBP3Q969Y2 492 aaKnown RBP6.71□□□□□ -1.34
LRCH3-217ENST00000483442 NLRP3Q96P20 1036 aa6.71□□□□□ -1.34
LRCH3-217ENST00000483442 DYRK1BQ9Y463 629 aa6.71□□□□□ -1.34
LRCH3-217ENST00000483442 SPATA31C2B4DYI2 1134 aa6.7□□□□□ -1.34
LRCH3-217ENST00000483442 IRS1P35568 1242 aa6.7□□□□□ -1.34
LRCH3-217ENST00000483442 IRF5Q13568 498 aa6.7□□□□□ -1.34
LRCH3-217ENST00000483442 CYP2U1Q7Z449 544 aa6.7□□□□□ -1.34
LRCH3-217ENST00000483442 HRH3Q9Y5N1 445 aa6.7□□□□□ -1.34
LRCH3-217ENST00000483442 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
LRCH3-217ENST00000483442 MCCD1P59942 119 aaPredicted RBP6.69□□□□□ -1.34
LRCH3-217ENST00000483442 CENPCQ03188 943 aa6.69□□□□□ -1.34
LRCH3-217ENST00000483442 TPRNQ4KMQ1 711 aa6.69□□□□□ -1.34
LRCH3-217ENST00000483442 CCDC125Q86Z20 511 aa6.69□□□□□ -1.34
LRCH3-217ENST00000483442 PHTF2Q8N3S3 785 aa6.69□□□□□ -1.34
LRCH3-217ENST00000483442 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
LRCH3-217ENST00000483442 MBIPQ9NS73 344 aa6.69□□□□□ -1.34
LRCH3-217ENST00000483442 IGF1RP08069 1367 aa6.69□□□□□ -1.34
LRCH3-217ENST00000483442 TDRD9Q8NDG6 1382 aaKnown RBP6.69□□□□□ -1.34
LRCH3-217ENST00000483442 TOPBP1Q92547 1522 aa6.68□□□□□ -1.34
LRCH3-217ENST00000483442 PHKA2P46019 1235 aa6.68□□□□□ -1.34
LRCH3-217ENST00000483442 SUZ12Q15022 739 aaKnown RBP6.68□□□□□ -1.34
LRCH3-217ENST00000483442 CNKSR1Q969H4 720 aa6.68□□□□□ -1.34
LRCH3-217ENST00000483442 WASLO00401 505 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-217ENST00000483442 ACDQ96AP0 544 aa6.67□□□□□ -1.34
LRCH3-217ENST00000483442 ESYT1Q9BSJ8 1104 aa6.67□□□□□ -1.34
LRCH3-217ENST00000483442 FHDC1Q9C0D6 1143 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-217ENST00000483442 TIMMDC1Q9NPL8 285 aa6.67□□□□□ -1.34
LRCH3-217ENST00000483442 CHD1O14646 1710 aa6.67□□□□□ -1.34
LRCH3-217ENST00000483442 EIF4G3O43432 1585 aaKnown RBP6.66□□□□□ -1.34
LRCH3-217ENST00000483442 GNRH1P01148 92 aa6.66□□□□□ -1.34
LRCH3-217ENST00000483442 MARSP56192 900 aaKnown RBP6.66□□□□□ -1.34
LRCH3-217ENST00000483442 TAS1R3Q7RTX0 852 aa6.66□□□□□ -1.34
LRCH3-217ENST00000483442 XAGE2Q96GT9 111 aa6.66□□□□□ -1.34
LRCH3-217ENST00000483442 GMCL1Q96IK5 515 aa6.66□□□□□ -1.34
LRCH3-217ENST00000483442 ZNF330Q9Y3S2 320 aaPredicted RBP6.66□□□□□ -1.34
LRCH3-217ENST00000483442 CNTNAP5Q8WYK1 1306 aa6.66□□□□□ -1.34
LRCH3-217ENST00000483442 RNF225M0QZC1 329 aaPredicted RBP6.65□□□□□ -1.34
LRCH3-217ENST00000483442 F11P03951 625 aa6.65□□□□□ -1.34
LRCH3-217ENST00000483442 UBAP2LQ14157 1087 aaKnown RBP6.65□□□□□ -1.34
LRCH3-217ENST00000483442 WDR44Q5JSH3 913 aa6.65□□□□□ -1.34
LRCH3-217ENST00000483442 NUCKS1Q9H1E3 243 aaKnown RBP6.65□□□□□ -1.34
LRCH3-217ENST00000483442 GPAMQ9HCL2 828 aa6.65□□□□□ -1.34
LRCH3-217ENST00000483442 H7C1W4 665 aa6.64□□□□□ -1.35
LRCH3-217ENST00000483442 VAC14Q08AM6 782 aa6.64□□□□□ -1.35
LRCH3-217ENST00000483442 C4orf17Q53FE4 359 aa6.64□□□□□ -1.35
LRCH3-217ENST00000483442 TRIM52Q96A61 297 aa6.64□□□□□ -1.35
LRCH3-217ENST00000483442 ETNK1Q9HBU6 452 aa6.64□□□□□ -1.35
LRCH3-217ENST00000483442 RAD54L2Q9Y4B4 1467 aa6.64□□□□□ -1.35
LRCH3-217ENST00000483442 ABCC8Q09428 1581 aa6.64□□□□□ -1.35
LRCH3-217ENST00000483442 SOGA1O94964 1423 aa6.63□□□□□ -1.35
LRCH3-217ENST00000483442 ITGB2P05107 769 aa6.63□□□□□ -1.35
LRCH3-217ENST00000483442 BCRP11274 1271 aa6.63□□□□□ -1.35
LRCH3-217ENST00000483442 MAP3K10Q02779 954 aa6.63□□□□□ -1.35
LRCH3-217ENST00000483442 FOXR1Q6PIV2 292 aa6.63□□□□□ -1.35
LRCH3-217ENST00000483442 C1orf229Q6ZS94 237 aaPredicted RBP6.63□□□□□ -1.35
LRCH3-217ENST00000483442 ZSCAN10Q96SZ4 725 aaPredicted RBP6.63□□□□□ -1.35
LRCH3-217ENST00000483442 CCDC88BA6NC98 1476 aa6.62□□□□□ -1.35
LRCH3-217ENST00000483442 GAPVD1Q14C86 1478 aa6.62□□□□□ -1.35
LRCH3-217ENST00000483442 MX2P20592 715 aa6.62□□□□□ -1.35
LRCH3-217ENST00000483442 GPAT2Q6NUI2 795 aa6.62□□□□□ -1.35
LRCH3-217ENST00000483442 ZNF592Q92610 1267 aa6.62□□□□□ -1.35
LRCH3-217ENST00000483442 SCARF2Q96GP6 870 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-217ENST00000483442 ESF1Q9H501 851 aaKnown RBP6.62□□□□□ -1.35
LRCH3-217ENST00000483442 RUBCNLQ9H714 662 aa6.62□□□□□ -1.35
LRCH3-217ENST00000483442 GDPD2Q9HCC8 539 aa6.62□□□□□ -1.35
LRCH3-217ENST00000483442 CHIC2Q9UKJ5 165 aa6.62□□□□□ -1.35
LRCH3-217ENST00000483442 DNMT3AQ9Y6K1 912 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-217ENST00000483442 SNAPC4Q5SXM2 1469 aa6.61□□□□□ -1.35
LRCH3-217ENST00000483442 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-217ENST00000483442 MSX1P28360 303 aa6.61□□□□□ -1.35
LRCH3-217ENST00000483442 OXLD1Q5BKU9 147 aa6.61□□□□□ -1.35
LRCH3-217ENST00000483442 KANK3Q6NY19 840 aa6.61□□□□□ -1.35
LRCH3-217ENST00000483442 DOLKQ9UPQ8 538 aa6.61□□□□□ -1.35
LRCH3-217ENST00000483442 TARBP1Q13395 1621 aaKnown RBP6.61□□□□□ -1.35
LRCH3-217ENST00000483442 TOP2AP11388 1531 aaKnown RBP6.6□□□□□ -1.35
LRCH3-217ENST00000483442 SHISA8B8ZZ34 492 aa6.6□□□□□ -1.35
LRCH3-217ENST00000483442 C2CD2LO14523 706 aa6.6□□□□□ -1.35
LRCH3-217ENST00000483442 SCNN1DP51172 638 aa6.6□□□□□ -1.35
LRCH3-217ENST00000483442 FAM69CQ0P6D2 419 aa6.6□□□□□ -1.35
LRCH3-217ENST00000483442 TRERF1Q96PN7 1200 aa6.6□□□□□ -1.35
LRCH3-217ENST00000483442 CLASP1Q7Z460 1538 aa6.6□□□□□ -1.35
LRCH3-217ENST00000483442 POLA1P09884 1462 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-217ENST00000483442 A0A1B0GTH6 734 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 APBB1O00213 710 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 OIP5O43482 229 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 SNRPNP63162 240 aaKnown RBP6.59□□□□□ -1.35
LRCH3-217ENST00000483442 EIF4G2P78344 907 aaKnown RBP eCLIP6.59□□□□□ -1.35
LRCH3-217ENST00000483442 SLFNL1Q499Z3 407 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 TMEM214Q6NUQ4 689 aaKnown RBP6.59□□□□□ -1.35
LRCH3-217ENST00000483442 RNF135Q8IUD6 432 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 NEDD1Q8NHV4 660 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 KLRG1Q96E93 195 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 DCAF5Q96JK2 942 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 CFHR5Q9BXR6 569 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 ENAMQ9NRM1 1142 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 HCN2Q9UL51 889 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 DNMBPQ6XZF7 1577 aa6.59□□□□□ -1.35
LRCH3-217ENST00000483442 SYNJ1O43426 1573 aa6.58□□□□□ -1.36
LRCH3-217ENST00000483442 ABL2P42684 1182 aa6.58□□□□□ -1.36
LRCH3-217ENST00000483442 USP4Q13107 963 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms