RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 SPATA31C2B4DYI2 1134 aa8.43□□□□□ -1.06
COMMD6-210ENST00000483290 WASLO00401 505 aaPredicted RBP8.43□□□□□ -1.06
COMMD6-210ENST00000483290 ZMYM1Q5SVZ6 1142 aa8.43□□□□□ -1.06
COMMD6-210ENST00000483290 UBE2Q2Q8WVN8 375 aa8.43□□□□□ -1.06
COMMD6-210ENST00000483290 CC2D2BQ6DHV5 1058 aa8.42□□□□□ -1.06
COMMD6-210ENST00000483290 CYP2U1Q7Z449 544 aa8.42□□□□□ -1.06
COMMD6-210ENST00000483290 GRIP2Q9C0E4 1043 aa8.42□□□□□ -1.06
COMMD6-210ENST00000483290 SEMA6BQ9H3T3 888 aa8.42□□□□□ -1.06
COMMD6-210ENST00000483290 SHROOM4Q9ULL8 1493 aa8.42□□□□□ -1.06
COMMD6-210ENST00000483290 LOC105371045A0A1W2PR82 267 aa8.41□□□□□ -1.06
COMMD6-210ENST00000483290 AP1G2O75843 785 aa8.41□□□□□ -1.06
COMMD6-210ENST00000483290 CLN3Q13286 438 aa8.41□□□□□ -1.06
COMMD6-210ENST00000483290 ESF1Q9H501 851 aaKnown RBP8.41□□□□□ -1.06
COMMD6-210ENST00000483290 BMP4P12644 408 aa8.4□□□□□ -1.06
COMMD6-210ENST00000483290 C1orf229Q6ZS94 237 aaPredicted RBP8.4□□□□□ -1.06
COMMD6-210ENST00000483290 CD163Q86VB7 1156 aa8.4□□□□□ -1.06
COMMD6-210ENST00000483290 KRTAP1-3Q8IUG1 177 aa8.4□□□□□ -1.06
COMMD6-210ENST00000483290 SUV39H2Q9H5I1 410 aa8.4□□□□□ -1.06
COMMD6-210ENST00000483290 LBRQ14739 615 aaKnown RBP8.39□□□□□ -1.07
COMMD6-210ENST00000483290 RNF20Q5VTR2 975 aa8.39□□□□□ -1.07
COMMD6-210ENST00000483290 LINC00114Q6XXX2 140 aa8.39□□□□□ -1.07
COMMD6-210ENST00000483290 SLCO4C1Q6ZQN7 724 aa8.39□□□□□ -1.07
COMMD6-210ENST00000483290 GPAMQ9HCL2 828 aa8.39□□□□□ -1.07
COMMD6-210ENST00000483290 SCO2A0A1W2PP80 73 aa8.38□□□□□ -1.07
COMMD6-210ENST00000483290 CSB-PGBD3P0DP91 1061 aa8.38□□□□□ -1.07
COMMD6-210ENST00000483290 ERVK-9P63128 1117 aa8.38□□□□□ -1.07
COMMD6-210ENST00000483290 PGBD3Q8N328 593 aa8.38□□□□□ -1.07
COMMD6-210ENST00000483290 A0A1B0GTH6 734 aa8.37□□□□□ -1.07
COMMD6-210ENST00000483290 BRD2P25440 801 aaKnown RBP8.37□□□□□ -1.07
COMMD6-210ENST00000483290 GTF2E1P29083 439 aaPredicted RBP8.37□□□□□ -1.07
COMMD6-210ENST00000483290 ATXN7L1Q9ULK2 861 aaPredicted RBP8.37□□□□□ -1.07
COMMD6-210ENST00000483290 PCDHB9Q9Y5E1 797 aa8.37□□□□□ -1.07
COMMD6-210ENST00000483290 GIGYF1O75420 1035 aaPredicted RBP8.36□□□□□ -1.07
COMMD6-210ENST00000483290 CHRNA4P43681 627 aa8.36□□□□□ -1.07
COMMD6-210ENST00000483290 DOC2BQ14184 412 aa8.36□□□□□ -1.07
COMMD6-210ENST00000483290 SKIV2LQ15477 1246 aaKnown RBP8.36□□□□□ -1.07
COMMD6-210ENST00000483290 EPS8L1Q8TE68 723 aa8.36□□□□□ -1.07
COMMD6-210ENST00000483290 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
COMMD6-210ENST00000483290 GGA1Q9UJY5 639 aa8.36□□□□□ -1.07
COMMD6-210ENST00000483290 PDE4CQ08493 712 aa8.35□□□□□ -1.07
COMMD6-210ENST00000483290 EFHC2Q5JST6 749 aa8.35□□□□□ -1.07
COMMD6-210ENST00000483290 TAF7LQ5H9L4 462 aa8.34□□□□□ -1.07
COMMD6-210ENST00000483290 USP17L8P0C7I0 530 aa8.33□□□□□ -1.08
COMMD6-210ENST00000483290 UBTFP17480 764 aaKnown RBP8.33□□□□□ -1.08
COMMD6-210ENST00000483290 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
COMMD6-210ENST00000483290 GATA4P43694 442 aa8.33□□□□□ -1.08
COMMD6-210ENST00000483290 GNASQ5JWF2 1037 aa8.33□□□□□ -1.08
COMMD6-210ENST00000483290 BTBD6Q96KE9 485 aa8.33□□□□□ -1.08
COMMD6-210ENST00000483290 CHMP4AQ9BY43 222 aa8.33□□□□□ -1.08
COMMD6-210ENST00000483290 ZBBXA8MT70 800 aa8.32□□□□□ -1.08
COMMD6-210ENST00000483290 THBS1P07996 1170 aa8.32□□□□□ -1.08
COMMD6-210ENST00000483290 EPXP11678 715 aa8.32□□□□□ -1.08
COMMD6-210ENST00000483290 FGFR3P22607 806 aa8.32□□□□□ -1.08
COMMD6-210ENST00000483290 ITGB7P26010 798 aa8.32□□□□□ -1.08
COMMD6-210ENST00000483290 PHKA2P46019 1235 aa8.32□□□□□ -1.08
COMMD6-210ENST00000483290 DGKGP49619 791 aa8.32□□□□□ -1.08
COMMD6-210ENST00000483290 LCE3BQ5TA77 95 aa8.32□□□□□ -1.08
COMMD6-210ENST00000483290 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
COMMD6-210ENST00000483290 HMX1Q9NP08 348 aaPredicted RBP8.32□□□□□ -1.08
COMMD6-210ENST00000483290 SH3D19Q5HYK7 790 aa8.31□□□□□ -1.08
COMMD6-210ENST00000483290 RNF135Q8IUD6 432 aa8.31□□□□□ -1.08
COMMD6-210ENST00000483290 ZSCAN10Q96SZ4 725 aaPredicted RBP8.31□□□□□ -1.08
COMMD6-210ENST00000483290 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.31□□□□□ -1.08
COMMD6-210ENST00000483290 ARAFP10398 606 aa8.3□□□□□ -1.08
COMMD6-210ENST00000483290 HSP90B1P14625 803 aaKnown RBP8.3□□□□□ -1.08
COMMD6-210ENST00000483290 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
COMMD6-210ENST00000483290 CNKSR1Q969H4 720 aa8.3□□□□□ -1.08
COMMD6-210ENST00000483290 ABHD17AQ96GS6 310 aa8.3□□□□□ -1.08
COMMD6-210ENST00000483290 RUBCNLQ9H714 662 aa8.3□□□□□ -1.08
COMMD6-210ENST00000483290 GNRH1P01148 92 aa8.29□□□□□ -1.08
COMMD6-210ENST00000483290 TMEM214Q6NUQ4 689 aaKnown RBP8.29□□□□□ -1.08
COMMD6-210ENST00000483290 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
COMMD6-210ENST00000483290 ESYT1Q9BSJ8 1104 aa8.29□□□□□ -1.08
COMMD6-210ENST00000483290 RAB6BQ9NRW1 208 aa8.29□□□□□ -1.08
COMMD6-210ENST00000483290 PCDHB11Q9Y5F2 797 aa8.29□□□□□ -1.08
COMMD6-210ENST00000483290 NEURL1BA8MQ27 555 aa8.28□□□□□ -1.08
COMMD6-210ENST00000483290 C2CD2LO14523 706 aa8.28□□□□□ -1.08
COMMD6-210ENST00000483290 CENPCQ03188 943 aa8.28□□□□□ -1.08
COMMD6-210ENST00000483290 UBAP2LQ14157 1087 aaKnown RBP8.28□□□□□ -1.08
COMMD6-210ENST00000483290 NBPF11Q86T75 865 aa8.28□□□□□ -1.08
COMMD6-210ENST00000483290 PKNOX2Q96KN3 472 aa8.28□□□□□ -1.08
COMMD6-210ENST00000483290 OSBPL3Q9H4L5 887 aa8.28□□□□□ -1.08
COMMD6-210ENST00000483290 TRAK2O60296 914 aa8.27□□□□□ -1.09
COMMD6-210ENST00000483290 SPATA31C1P0DKV0 1188 aa8.27□□□□□ -1.09
COMMD6-210ENST00000483290 SCTRP47872 440 aa8.27□□□□□ -1.09
COMMD6-210ENST00000483290 CTBSQ01459 385 aa8.27□□□□□ -1.09
COMMD6-210ENST00000483290 FBXO31Q5XUX0 539 aaPredicted RBP8.27□□□□□ -1.09
COMMD6-210ENST00000483290 FIGNL1Q6PIW4 674 aa8.27□□□□□ -1.09
COMMD6-210ENST00000483290 CHSY3Q70JA7 882 aa8.27□□□□□ -1.09
COMMD6-210ENST00000483290 ZFP64Q9NPA5 681 aa8.27□□□□□ -1.09
COMMD6-210ENST00000483290 BTBD11A6QL63 1104 aa8.26□□□□□ -1.09
COMMD6-210ENST00000483290 MSX1P28360 303 aa8.26□□□□□ -1.09
COMMD6-210ENST00000483290 ZNF330Q9Y3S2 320 aaPredicted RBP8.26□□□□□ -1.09
COMMD6-210ENST00000483290 SPDYE3A6NKU9 549 aa8.25□□□□□ -1.09
COMMD6-210ENST00000483290 BNIP3LO60238 219 aa8.25□□□□□ -1.09
COMMD6-210ENST00000483290 SLC24A3Q9HC58 644 aa8.25□□□□□ -1.09
COMMD6-210ENST00000483290 MYCP01106 439 aaPredicted RBP8.24□□□□□ -1.09
COMMD6-210ENST00000483290 IL2RAP01589 272 aa8.24□□□□□ -1.09
COMMD6-210ENST00000483290 ADH6P28332 368 aa8.24□□□□□ -1.09
COMMD6-210ENST00000483290 C4orf17Q53FE4 359 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms