RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 WASLO00401 505 aaPredicted RBP7.29□□□□□ -1.24
LAPTM4A-202ENST00000483117 ADAMTS2O95450 1211 aa7.29□□□□□ -1.24
LAPTM4A-202ENST00000483117 PHKA2P46019 1235 aa7.29□□□□□ -1.24
LAPTM4A-202ENST00000483117 XAGE2Q96GT9 111 aa7.29□□□□□ -1.24
LAPTM4A-202ENST00000483117 TIMMDC1Q9NPL8 285 aa7.29□□□□□ -1.24
LAPTM4A-202ENST00000483117 HRH3Q9Y5N1 445 aa7.29□□□□□ -1.24
LAPTM4A-202ENST00000483117 USP4Q13107 963 aa7.28□□□□□ -1.24
LAPTM4A-202ENST00000483117 WASHC4Q2M389 1173 aa7.28□□□□□ -1.24
LAPTM4A-202ENST00000483117 GTPBP3Q969Y2 492 aaKnown RBP7.28□□□□□ -1.24
LAPTM4A-202ENST00000483117 ZSCAN10Q96SZ4 725 aaPredicted RBP7.28□□□□□ -1.24
LAPTM4A-202ENST00000483117 FHDC1Q9C0D6 1143 aaPredicted RBP7.28□□□□□ -1.24
LAPTM4A-202ENST00000483117 CHIC2Q9UKJ5 165 aa7.28□□□□□ -1.24
LAPTM4A-202ENST00000483117 COG6Q9Y2V7 657 aa7.28□□□□□ -1.24
LAPTM4A-202ENST00000483117 MSTNO14793 375 aa7.27□□□□□ -1.25
LAPTM4A-202ENST00000483117 SRSF11Q05519 484 aaKnown RBP7.27□□□□□ -1.25
LAPTM4A-202ENST00000483117 WDR44Q5JSH3 913 aa7.27□□□□□ -1.25
LAPTM4A-202ENST00000483117 LYPD4Q6UWN0 246 aa7.27□□□□□ -1.25
LAPTM4A-202ENST00000483117 GMCL1Q96IK5 515 aa7.27□□□□□ -1.25
LAPTM4A-202ENST00000483117 ETNK1Q9HBU6 452 aa7.27□□□□□ -1.25
LAPTM4A-202ENST00000483117 GPAMQ9HCL2 828 aa7.27□□□□□ -1.25
LAPTM4A-202ENST00000483117 H7C1W4 665 aa7.26□□□□□ -1.25
LAPTM4A-202ENST00000483117 ARHGEF15O94989 841 aa7.26□□□□□ -1.25
LAPTM4A-202ENST00000483117 F11P03951 625 aa7.26□□□□□ -1.25
LAPTM4A-202ENST00000483117 SEMA3FQ13275 785 aa7.26□□□□□ -1.25
LAPTM4A-202ENST00000483117 TMEM214Q6NUQ4 689 aaKnown RBP7.26□□□□□ -1.25
LAPTM4A-202ENST00000483117 KANK3Q6NY19 840 aa7.26□□□□□ -1.25
LAPTM4A-202ENST00000483117 THBS1P07996 1170 aa7.25□□□□□ -1.25
LAPTM4A-202ENST00000483117 C4orf17Q53FE4 359 aa7.25□□□□□ -1.25
LAPTM4A-202ENST00000483117 ESCO1Q5FWF5 840 aa7.25□□□□□ -1.25
LAPTM4A-202ENST00000483117 FOXR1Q6PIV2 292 aa7.25□□□□□ -1.25
LAPTM4A-202ENST00000483117 PLPP7Q8NBV4 271 aa7.25□□□□□ -1.25
LAPTM4A-202ENST00000483117 POM121Q96HA1 1249 aa7.25□□□□□ -1.25
LAPTM4A-202ENST00000483117 NUCKS1Q9H1E3 243 aaKnown RBP7.25□□□□□ -1.25
LAPTM4A-202ENST00000483117 MBIPQ9NS73 344 aa7.25□□□□□ -1.25
LAPTM4A-202ENST00000483117 IGF1RP08069 1367 aa7.24□□□□□ -1.25
LAPTM4A-202ENST00000483117 PIK3CDO00329 1044 aa7.24□□□□□ -1.25
LAPTM4A-202ENST00000483117 CELA2BP08218 269 aaPredicted RBP7.24□□□□□ -1.25
LAPTM4A-202ENST00000483117 GNASQ5JWF2 1037 aa7.24□□□□□ -1.25
LAPTM4A-202ENST00000483117 SIRT1Q96EB6 747 aa7.24□□□□□ -1.25
LAPTM4A-202ENST00000483117 GTF2E1P29083 439 aaPredicted RBP7.23□□□□□ -1.25
LAPTM4A-202ENST00000483117 SOX11P35716 441 aa7.23□□□□□ -1.25
LAPTM4A-202ENST00000483117 SCNN1DP51172 638 aa7.23□□□□□ -1.25
LAPTM4A-202ENST00000483117 GDF10P55107 478 aa7.23□□□□□ -1.25
LAPTM4A-202ENST00000483117 TLR1Q15399 786 aa7.23□□□□□ -1.25
LAPTM4A-202ENST00000483117 TRERF1Q96PN7 1200 aa7.23□□□□□ -1.25
LAPTM4A-202ENST00000483117 K7ELQ4 463 aaPredicted RBP7.22□□□□□ -1.25
LAPTM4A-202ENST00000483117 MAP7D1Q3KQU3 841 aa7.22□□□□□ -1.25
LAPTM4A-202ENST00000483117 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
LAPTM4A-202ENST00000483117 SPOCK3Q9BQ16 436 aa7.22□□□□□ -1.25
LAPTM4A-202ENST00000483117 RUBCNLQ9H714 662 aa7.22□□□□□ -1.25
LAPTM4A-202ENST00000483117 A0A1B0GTH6 734 aa7.21□□□□□ -1.26
LAPTM4A-202ENST00000483117 INHAP05111 366 aa7.21□□□□□ -1.26
LAPTM4A-202ENST00000483117 MX2P20592 715 aa7.21□□□□□ -1.26
LAPTM4A-202ENST00000483117 MAP3K10Q02779 954 aa7.21□□□□□ -1.26
LAPTM4A-202ENST00000483117 PPARGC1BQ86YN6 1023 aaKnown RBP7.21□□□□□ -1.26
LAPTM4A-202ENST00000483117 RHBDD1Q8TEB9 315 aa7.21□□□□□ -1.26
LAPTM4A-202ENST00000483117 MSX1P28360 303 aa7.2□□□□□ -1.26
LAPTM4A-202ENST00000483117 MARSP56192 900 aaKnown RBP7.2□□□□□ -1.26
LAPTM4A-202ENST00000483117 LCE1DQ5T752 114 aa7.2□□□□□ -1.26
LAPTM4A-202ENST00000483117 ACDQ96AP0 544 aa7.2□□□□□ -1.26
LAPTM4A-202ENST00000483117 ALG2Q9H553 416 aa7.2□□□□□ -1.26
LAPTM4A-202ENST00000483117 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
LAPTM4A-202ENST00000483117 TMEM229AB2RXF0 380 aa7.19□□□□□ -1.26
LAPTM4A-202ENST00000483117 SKIP12755 728 aa7.19□□□□□ -1.26
LAPTM4A-202ENST00000483117 PLA2G4AP47712 749 aa7.19□□□□□ -1.26
LAPTM4A-202ENST00000483117 UBAP2LQ14157 1087 aaKnown RBP7.19□□□□□ -1.26
LAPTM4A-202ENST00000483117 CSB-PGBD3P0DP91 1061 aa7.18□□□□□ -1.26
LAPTM4A-202ENST00000483117 PGBD3Q8N328 593 aa7.18□□□□□ -1.26
LAPTM4A-202ENST00000483117 PCDHGA11Q9Y5H2 935 aa7.18□□□□□ -1.26
LAPTM4A-202ENST00000483117 POM121CA8CG34 1229 aa7.17□□□□□ -1.26
LAPTM4A-202ENST00000483117 RAD21O60216 631 aa7.17□□□□□ -1.26
LAPTM4A-202ENST00000483117 BCRP11274 1271 aa7.17□□□□□ -1.26
LAPTM4A-202ENST00000483117 SMTNP53814 917 aa7.17□□□□□ -1.26
LAPTM4A-202ENST00000483117 EML3Q32P44 896 aa7.17□□□□□ -1.26
LAPTM4A-202ENST00000483117 PLA2G4EQ3MJ16 856 aa7.17□□□□□ -1.26
LAPTM4A-202ENST00000483117 WWC1Q8IX03 1113 aa7.17□□□□□ -1.26
LAPTM4A-202ENST00000483117 CFHR5Q9BXR6 569 aa7.17□□□□□ -1.26
LAPTM4A-202ENST00000483117 USP3Q9Y6I4 520 aa7.17□□□□□ -1.26
LAPTM4A-202ENST00000483117 UBTFP17480 764 aaKnown RBP7.16□□□□□ -1.26
LAPTM4A-202ENST00000483117 TBC1D9Q6ZT07 1266 aa7.16□□□□□ -1.26
LAPTM4A-202ENST00000483117 DEPDC4Q8N2C3 294 aa7.16□□□□□ -1.26
LAPTM4A-202ENST00000483117 SCARF2Q96GP6 870 aaPredicted RBP7.16□□□□□ -1.26
LAPTM4A-202ENST00000483117 ENAMQ9NRM1 1142 aa7.16□□□□□ -1.26
LAPTM4A-202ENST00000483117 NSFL1CQ9UNZ2 370 aaKnown RBP7.16□□□□□ -1.26
LAPTM4A-202ENST00000483117 FLIIQ13045 1269 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 NCOA4Q13772 614 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 LBRQ14739 615 aaKnown RBP7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 EFHC2Q5JST6 749 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 NEDD1Q8NHV4 660 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 ADAMTS19Q8TE59 1207 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 AIDAQ96BJ3 306 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 ABHD17AQ96GS6 310 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 NIFKQ9BYG3 293 aaKnown RBP7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 CRISPLD1Q9H336 500 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 PHF24Q9UPV7 400 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 NOD1Q9Y239 953 aa7.15□□□□□ -1.26
LAPTM4A-202ENST00000483117 A6NJY4 79 aa7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 BNIP3LO60238 219 aa7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 ATP4AP20648 1035 aa7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 MAP2K3P46734 347 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms