RNA–Protein interactions for RNA: ENST00000480747.1

CKAP2-206, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 4

Gene CKAP2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-206ENST00000480747 ZNF16P17020 682 aaPredicted RBP9.52□□□□□ -0.89
CKAP2-206ENST00000480747 DZIP3Q86Y13 1208 aaKnown RBP9.52□□□□□ -0.89
CKAP2-206ENST00000480747 KIAA1024Q9UPX6 916 aa9.52□□□□□ -0.89
CKAP2-206ENST00000480747 C6orf118Q5T5N4 469 aa9.51□□□□□ -0.89
CKAP2-206ENST00000480747 MRRFQ96E11 262 aaKnown RBP9.51□□□□□ -0.89
CKAP2-206ENST00000480747 BMP2P12643 396 aa9.5□□□□□ -0.89
CKAP2-206ENST00000480747 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
CKAP2-206ENST00000480747 SWI5Q1ZZU3 235 aa9.5□□□□□ -0.89
CKAP2-206ENST00000480747 TSEN34Q9BSV6 310 aaKnown RBP9.5□□□□□ -0.89
CKAP2-206ENST00000480747 NXF1Q9UBU9 619 aaKnown RBP9.5□□□□□ -0.89
CKAP2-206ENST00000480747 ERCC3P19447 782 aa9.49□□□□□ -0.89
CKAP2-206ENST00000480747 EML3Q32P44 896 aa9.49□□□□□ -0.89
CKAP2-206ENST00000480747 CCDC85AQ96PX6 553 aaPredicted RBP9.49□□□□□ -0.89
CKAP2-206ENST00000480747 SHROOM4Q9ULL8 1493 aa9.48□□□□□ -0.89
CKAP2-206ENST00000480747 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
CKAP2-206ENST00000480747 LZTS3O60299 673 aaPredicted RBP9.48□□□□□ -0.89
CKAP2-206ENST00000480747 PRMT3O60678 531 aa9.48□□□□□ -0.89
CKAP2-206ENST00000480747 OCLNQ16625 522 aa9.48□□□□□ -0.89
CKAP2-206ENST00000480747 Q6ZVU0 165 aa9.48□□□□□ -0.89
CKAP2-206ENST00000480747 NPAS4Q8IUM7 802 aa9.48□□□□□ -0.89
CKAP2-206ENST00000480747 NPAS3Q8IXF0 933 aa9.48□□□□□ -0.89
CKAP2-206ENST00000480747 BCL2L13Q9BXK5 485 aa9.48□□□□□ -0.89
CKAP2-206ENST00000480747 DNAAF2Q9NVR5 837 aaKnown RBP9.48□□□□□ -0.89
CKAP2-206ENST00000480747 ESPNB1AK53 854 aa9.47□□□□□ -0.89
CKAP2-206ENST00000480747 CBLBQ13191 982 aa9.47□□□□□ -0.89
CKAP2-206ENST00000480747 MAP7D1Q3KQU3 841 aa9.47□□□□□ -0.89
CKAP2-206ENST00000480747 C1orf216Q8TAB5 229 aa9.47□□□□□ -0.89
CKAP2-206ENST00000480747 GIPC2Q8TF65 315 aa9.47□□□□□ -0.89
CKAP2-206ENST00000480747 SIRT1Q96EB6 747 aa9.47□□□□□ -0.89
CKAP2-206ENST00000480747 USP35Q9P2H5 1018 aa9.47□□□□□ -0.89
CKAP2-206ENST00000480747 BIN2Q9UBW5 565 aaPredicted RBP9.47□□□□□ -0.89
CKAP2-206ENST00000480747 ANKRD33BA6NCL7 494 aa9.46□□□□□ -0.9
CKAP2-206ENST00000480747 MAN1A2O60476 641 aa9.46□□□□□ -0.9
CKAP2-206ENST00000480747 ZNF211Q13398 564 aaPredicted RBP9.46□□□□□ -0.9
CKAP2-206ENST00000480747 SLC16A10Q8TF71 515 aa9.46□□□□□ -0.9
CKAP2-206ENST00000480747 PRIMPOLQ96LW4 560 aa9.46□□□□□ -0.9
CKAP2-206ENST00000480747 SOBPA7XYQ1 873 aa9.45□□□□□ -0.9
CKAP2-206ENST00000480747 LGR5O75473 907 aa9.45□□□□□ -0.9
CKAP2-206ENST00000480747 RAB15P59190 212 aa9.45□□□□□ -0.9
CKAP2-206ENST00000480747 MCCD1P59942 119 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-206ENST00000480747 TRIM50Q86XT4 487 aa9.45□□□□□ -0.9
CKAP2-206ENST00000480747 SEPT12Q8IYM1 358 aa9.45□□□□□ -0.9
CKAP2-206ENST00000480747 SIX5Q8N196 739 aa9.45□□□□□ -0.9
CKAP2-206ENST00000480747 ANO2Q9NQ90 1003 aa9.45□□□□□ -0.9
CKAP2-206ENST00000480747 NOD1Q9Y239 953 aa9.45□□□□□ -0.9
CKAP2-206ENST00000480747 SOS2Q07890 1332 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-206ENST00000480747 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
CKAP2-206ENST00000480747 TAS1R3Q7RTX0 852 aa9.44□□□□□ -0.9
CKAP2-206ENST00000480747 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
CKAP2-206ENST00000480747 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
CKAP2-206ENST00000480747 DOLKQ9UPQ8 538 aa9.44□□□□□ -0.9
CKAP2-206ENST00000480747 SFI1A8K8P3 1242 aa9.43□□□□□ -0.9
CKAP2-206ENST00000480747 H3BM21 787 aa9.43□□□□□ -0.9
CKAP2-206ENST00000480747 ERVH48-1M5A8F1 160 aa9.43□□□□□ -0.9
CKAP2-206ENST00000480747 WIPF1O43516 503 aa9.43□□□□□ -0.9
CKAP2-206ENST00000480747 ATP1A2P50993 1020 aa9.43□□□□□ -0.9
CKAP2-206ENST00000480747 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
CKAP2-206ENST00000480747 ZNF784Q8NCA9 323 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-206ENST00000480747 ZNF592Q92610 1267 aa9.43□□□□□ -0.9
CKAP2-206ENST00000480747 TMPRSS4Q9NRS4 437 aa9.43□□□□□ -0.9
CKAP2-206ENST00000480747 H3BRB1 525 aa9.42□□□□□ -0.9
CKAP2-206ENST00000480747 SPINT1O43278 529 aa9.42□□□□□ -0.9
CKAP2-206ENST00000480747 ABL1P00519 1130 aa9.42□□□□□ -0.9
CKAP2-206ENST00000480747 GTF2IP78347 998 aa9.42□□□□□ -0.9
CKAP2-206ENST00000480747 TAGLNQ01995 201 aaKnown RBP9.42□□□□□ -0.9
CKAP2-206ENST00000480747 TUT1Q9H6E5 874 aaKnown RBP9.42□□□□□ -0.9
CKAP2-206ENST00000480747 DNMT3LQ9UJW3 386 aa9.42□□□□□ -0.9
CKAP2-206ENST00000480747 TTLL8A6PVC2 850 aa9.41□□□□□ -0.9
CKAP2-206ENST00000480747 GIGYF1O75420 1035 aaPredicted RBP9.41□□□□□ -0.9
CKAP2-206ENST00000480747 VEGFBP49765 207 aa9.41□□□□□ -0.9
CKAP2-206ENST00000480747 ECM1Q16610 540 aa9.41□□□□□ -0.9
CKAP2-206ENST00000480747 IRF7Q92985 503 aa9.41□□□□□ -0.9
CKAP2-206ENST00000480747 TRIM52Q96A61 297 aa9.41□□□□□ -0.9
CKAP2-206ENST00000480747 ICMTO60725 284 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 LILRA1O75019 489 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 SEC13P55735 322 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 CAPN12Q6ZSI9 719 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 TPCN2Q8NHX9 752 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 AGBL1Q96MI9 1066 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 SEPT3Q9UH03 358 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 EGFL7Q9UHF1 273 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
CKAP2-206ENST00000480747 ADH1AP07327 375 aa9.39□□□□□ -0.91
CKAP2-206ENST00000480747 RELBQ01201 579 aa9.39□□□□□ -0.91
CKAP2-206ENST00000480747 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.39□□□□□ -0.91
CKAP2-206ENST00000480747 FBXO33Q7Z6M2 555 aa9.39□□□□□ -0.91
CKAP2-206ENST00000480747 RNF20Q5VTR2 975 aa9.38□□□□□ -0.91
CKAP2-206ENST00000480747 TCF3P15923 654 aa9.37□□□□□ -0.91
CKAP2-206ENST00000480747 MTMR3Q13615 1198 aa9.37□□□□□ -0.91
CKAP2-206ENST00000480747 GAS2L2Q8NHY3 880 aa9.37□□□□□ -0.91
CKAP2-206ENST00000480747 MKNK1Q9BUB5 465 aa9.37□□□□□ -0.91
CKAP2-206ENST00000480747 CYLDQ9NQC7 956 aa9.37□□□□□ -0.91
CKAP2-206ENST00000480747 DNMT3AQ9Y6K1 912 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-206ENST00000480747 ADD1P35611 737 aaKnown RBP9.36□□□□□ -0.91
CKAP2-206ENST00000480747 INSM1Q01101 510 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-206ENST00000480747 GLYCTKQ8IVS8 523 aa9.36□□□□□ -0.91
CKAP2-206ENST00000480747 GTF3C2Q8WUA4 911 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-206ENST00000480747 INSM2Q96T92 566 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms