RNA–Protein interactions for RNA: ENST00000480747.1

CKAP2-206, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 4

Gene CKAP2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-206ENST00000480747 AEBP2Q6ZN18 517 aaPredicted RBP26.72■■□□□ 1.87
CKAP2-206ENST00000480747 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
CKAP2-206ENST00000480747 SENP3Q9H4L4 574 aaPredicted RBP22.78■■□□□ 1.24
CKAP2-206ENST00000480747 PHF23Q9BUL5 403 aaPredicted RBP22.59■■□□□ 1.21
CKAP2-206ENST00000480747 FOXD1Q16676 465 aa21.15■□□□□ 0.98
CKAP2-206ENST00000480747 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
CKAP2-206ENST00000480747 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
CKAP2-206ENST00000480747 ADRA2BP18089 450 aa20.01■□□□□ 0.79
CKAP2-206ENST00000480747 PIAS4Q8N2W9 510 aaPredicted RBP19.88■□□□□ 0.77
CKAP2-206ENST00000480747 MSH5O43196 834 aa19.7■□□□□ 0.74
CKAP2-206ENST00000480747 POTEDQ86YR6 584 aa18.56■□□□□ 0.56
CKAP2-206ENST00000480747 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
CKAP2-206ENST00000480747 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
CKAP2-206ENST00000480747 PPP4R3CPQ6ZMV5 832 aa18.22■□□□□ 0.51
CKAP2-206ENST00000480747 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
CKAP2-206ENST00000480747 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
CKAP2-206ENST00000480747 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
CKAP2-206ENST00000480747 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
CKAP2-206ENST00000480747 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
CKAP2-206ENST00000480747 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
CKAP2-206ENST00000480747 KCNA4P22459 653 aa17.38■□□□□ 0.37
CKAP2-206ENST00000480747 DCAF8L1A6NGE4 600 aa17.33■□□□□ 0.36
CKAP2-206ENST00000480747 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
CKAP2-206ENST00000480747 RNF39Q9H2S5 420 aa16.83■□□□□ 0.28
CKAP2-206ENST00000480747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.271e-7■■■■■ 30.8
CKAP2-206ENST00000480747 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
CKAP2-206ENST00000480747 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
CKAP2-206ENST00000480747 SLC4A2P04920 1241 aa16.5■□□□□ 0.23
CKAP2-206ENST00000480747 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
CKAP2-206ENST00000480747 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
CKAP2-206ENST00000480747 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
CKAP2-206ENST00000480747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
CKAP2-206ENST00000480747 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
CKAP2-206ENST00000480747 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
CKAP2-206ENST00000480747 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
CKAP2-206ENST00000480747 APLP2Q06481 763 aa16.08■□□□□ 0.16
CKAP2-206ENST00000480747 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
CKAP2-206ENST00000480747 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
CKAP2-206ENST00000480747 CAPN15O75808 1086 aa16.05■□□□□ 0.16
CKAP2-206ENST00000480747 ZBTB22O15209 634 aa15.97■□□□□ 0.15
CKAP2-206ENST00000480747 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
CKAP2-206ENST00000480747 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
CKAP2-206ENST00000480747 DSG3P32926 999 aa15.87■□□□□ 0.13
CKAP2-206ENST00000480747 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
CKAP2-206ENST00000480747 ABCB7O75027 752 aa15.7■□□□□ 0.1
CKAP2-206ENST00000480747 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
CKAP2-206ENST00000480747 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
CKAP2-206ENST00000480747 POLA2Q14181 598 aa15.53■□□□□ 0.08
CKAP2-206ENST00000480747 ZBTB12Q9Y330 459 aaPredicted RBP15.31■□□□□ 0.04
CKAP2-206ENST00000480747 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
CKAP2-206ENST00000480747 FBLN2P98095 1184 aa15.07■□□□□ 0
CKAP2-206ENST00000480747 OSCARQ8IYS5 282 aa15.04■□□□□ -0
CKAP2-206ENST00000480747 MKRN4PQ13434 485 aaPredicted RBP14.97□□□□□ -0.01
CKAP2-206ENST00000480747 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
CKAP2-206ENST00000480747 SPDYE2BA6NHP3 402 aa14.84□□□□□ -0.03
CKAP2-206ENST00000480747 SPDYE6P0CI01 402 aa14.84□□□□□ -0.03
CKAP2-206ENST00000480747 SPDYE2Q495Y8 402 aa14.84□□□□□ -0.03
CKAP2-206ENST00000480747 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
CKAP2-206ENST00000480747 ZNF692Q9BU19 519 aaPredicted RBP14.7□□□□□ -0.06
CKAP2-206ENST00000480747 SSUH2Q9Y2M2 353 aa14.68□□□□□ -0.06
CKAP2-206ENST00000480747 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
CKAP2-206ENST00000480747 POTEHQ6S545 545 aa14.63□□□□□ -0.07
CKAP2-206ENST00000480747 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
CKAP2-206ENST00000480747 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
CKAP2-206ENST00000480747 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
CKAP2-206ENST00000480747 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
CKAP2-206ENST00000480747 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
CKAP2-206ENST00000480747 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
CKAP2-206ENST00000480747 AMER1Q5JTC6 1135 aaPredicted RBP14.41□□□□□ -0.1
CKAP2-206ENST00000480747 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
CKAP2-206ENST00000480747 PIP4P2Q8N4L2 257 aa14.38□□□□□ -0.11
CKAP2-206ENST00000480747 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
CKAP2-206ENST00000480747 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
CKAP2-206ENST00000480747 FKBP8Q14318 412 aa14.2□□□□□ -0.14
CKAP2-206ENST00000480747 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
CKAP2-206ENST00000480747 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
CKAP2-206ENST00000480747 PROM2Q8N271 834 aa14.19□□□□□ -0.14
CKAP2-206ENST00000480747 CHADLQ6NUI6 762 aa14.09□□□□□ -0.15
CKAP2-206ENST00000480747 HAX1O00165 279 aa14.02□□□□□ -0.17
CKAP2-206ENST00000480747 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
CKAP2-206ENST00000480747 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
CKAP2-206ENST00000480747 C19orf67A6NJJ6 358 aa13.9□□□□□ -0.18
CKAP2-206ENST00000480747 SP7Q8TDD2 431 aaPredicted RBP13.9□□□□□ -0.18
CKAP2-206ENST00000480747 EVX2Q03828 476 aa13.84□□□□□ -0.19
CKAP2-206ENST00000480747 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
CKAP2-206ENST00000480747 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
CKAP2-206ENST00000480747 NPM1P06748 294 aaKnown RBP eCLIP13.75□□□□□ -0.21
CKAP2-206ENST00000480747 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
CKAP2-206ENST00000480747 MIER1Q8N108 512 aa13.74□□□□□ -0.21
CKAP2-206ENST00000480747 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
CKAP2-206ENST00000480747 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
CKAP2-206ENST00000480747 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
CKAP2-206ENST00000480747 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
CKAP2-206ENST00000480747 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
CKAP2-206ENST00000480747 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
CKAP2-206ENST00000480747 GABBR2O75899 941 aa13.58□□□□□ -0.24
CKAP2-206ENST00000480747 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
CKAP2-206ENST00000480747 CLCN6P51797 869 aa13.55□□□□□ -0.24
CKAP2-206ENST00000480747 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
CKAP2-206ENST00000480747 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms