RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ITGB2P05107 769 aa8.35□□□□□ -1.07
HPS3-205ENST00000478525 ZSCAN10Q96SZ4 725 aaPredicted RBP8.35□□□□□ -1.07
HPS3-205ENST00000478525 FHDC1Q9C0D6 1143 aaPredicted RBP8.35□□□□□ -1.07
HPS3-205ENST00000478525 NSFL1CQ9UNZ2 370 aaKnown RBP8.35□□□□□ -1.07
HPS3-205ENST00000478525 APBB1O00213 710 aa8.34□□□□□ -1.07
HPS3-205ENST00000478525 OIP5O43482 229 aa8.34□□□□□ -1.07
HPS3-205ENST00000478525 BEND7Q8N7W2 519 aaPredicted RBP8.34□□□□□ -1.07
HPS3-205ENST00000478525 OXCT2Q9BYC2 517 aaPredicted RBP8.34□□□□□ -1.07
HPS3-205ENST00000478525 LRRC4BQ9NT99 713 aa8.34□□□□□ -1.07
HPS3-205ENST00000478525 A0A1B0GTH6 734 aa8.33□□□□□ -1.08
HPS3-205ENST00000478525 MAP2K3P46734 347 aa8.33□□□□□ -1.08
HPS3-205ENST00000478525 UBAP2LQ14157 1087 aaKnown RBP8.33□□□□□ -1.08
HPS3-205ENST00000478525 XAGE2Q96GT9 111 aa8.33□□□□□ -1.08
HPS3-205ENST00000478525 CFHR5Q9BXR6 569 aa8.33□□□□□ -1.08
HPS3-205ENST00000478525 TBC1D2BQ9UPU7 963 aa8.33□□□□□ -1.08
HPS3-205ENST00000478525 STAU1O95793 577 aaKnown RBP8.32□□□□□ -1.08
HPS3-205ENST00000478525 C4orf17Q53FE4 359 aa8.32□□□□□ -1.08
HPS3-205ENST00000478525 SHISA8B8ZZ34 492 aa8.31□□□□□ -1.08
HPS3-205ENST00000478525 MSTNO14793 375 aa8.31□□□□□ -1.08
HPS3-205ENST00000478525 SNRPNP63162 240 aaKnown RBP8.31□□□□□ -1.08
HPS3-205ENST00000478525 TSGA10IPQ3SY00 556 aa8.31□□□□□ -1.08
HPS3-205ENST00000478525 GNASQ5JWF2 1037 aa8.31□□□□□ -1.08
HPS3-205ENST00000478525 TMEM214Q6NUQ4 689 aaKnown RBP8.31□□□□□ -1.08
HPS3-205ENST00000478525 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
HPS3-205ENST00000478525 RUBCNLQ9H714 662 aa8.31□□□□□ -1.08
HPS3-205ENST00000478525 PROCP04070 461 aa8.3□□□□□ -1.08
HPS3-205ENST00000478525 C1orf229Q6ZS94 237 aaPredicted RBP8.3□□□□□ -1.08
HPS3-205ENST00000478525 KLRG1Q96E93 195 aa8.3□□□□□ -1.08
HPS3-205ENST00000478525 ETNK1Q9HBU6 452 aa8.3□□□□□ -1.08
HPS3-205ENST00000478525 DOLKQ9UPQ8 538 aa8.3□□□□□ -1.08
HPS3-205ENST00000478525 MSX1P28360 303 aa8.29□□□□□ -1.08
HPS3-205ENST00000478525 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
HPS3-205ENST00000478525 PHTF2Q8N3S3 785 aa8.29□□□□□ -1.08
HPS3-205ENST00000478525 PHF24Q9UPV7 400 aa8.29□□□□□ -1.08
HPS3-205ENST00000478525 CSB-PGBD3P0DP91 1061 aa8.28□□□□□ -1.08
HPS3-205ENST00000478525 GTF2E1P29083 439 aaPredicted RBP8.28□□□□□ -1.08
HPS3-205ENST00000478525 IRF5Q13568 498 aa8.28□□□□□ -1.08
HPS3-205ENST00000478525 LBRQ14739 615 aaKnown RBP8.28□□□□□ -1.08
HPS3-205ENST00000478525 PGBD3Q8N328 593 aa8.28□□□□□ -1.08
HPS3-205ENST00000478525 RHBDD1Q8TEB9 315 aa8.28□□□□□ -1.08
HPS3-205ENST00000478525 EIF4G2P78344 907 aaKnown RBP eCLIP8.27□□□□□ -1.09
HPS3-205ENST00000478525 TLR1Q15399 786 aa8.27□□□□□ -1.09
HPS3-205ENST00000478525 GALNT6Q8NCL4 622 aa8.27□□□□□ -1.09
HPS3-205ENST00000478525 ABHD17AQ96GS6 310 aa8.27□□□□□ -1.09
HPS3-205ENST00000478525 GDF2Q9UK05 429 aaPredicted RBP8.27□□□□□ -1.09
HPS3-205ENST00000478525 ATXN7L1Q9ULK2 861 aaPredicted RBP8.27□□□□□ -1.09
HPS3-205ENST00000478525 SLFNL1Q499Z3 407 aa8.26□□□□□ -1.09
HPS3-205ENST00000478525 OXLD1Q5BKU9 147 aa8.26□□□□□ -1.09
HPS3-205ENST00000478525 PPARGC1BQ86YN6 1023 aaKnown RBP8.26□□□□□ -1.09
HPS3-205ENST00000478525 RNF135Q8IUD6 432 aa8.26□□□□□ -1.09
HPS3-205ENST00000478525 NDFIP2Q9NV92 336 aa8.26□□□□□ -1.09
HPS3-205ENST00000478525 C2CD2LO14523 706 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 SLC24A1O60721 1099 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 ADAM23O75077 832 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 PLA2G4AP47712 749 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 USP4Q13107 963 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 EFHC2Q5JST6 749 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 GOLGA6L1Q8N7Z2 621 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 EDARADDQ8WWZ3 215 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 CRISPLD1Q9H336 500 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 CHIC2Q9UKJ5 165 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 MKL2Q9ULH7 1088 aa8.25□□□□□ -1.09
HPS3-205ENST00000478525 KRBA1A5PL33 1030 aa8.24□□□□□ -1.09
HPS3-205ENST00000478525 BNIP3LO60238 219 aa8.24□□□□□ -1.09
HPS3-205ENST00000478525 BMP4P12644 408 aa8.24□□□□□ -1.09
HPS3-205ENST00000478525 FGFR3P22607 806 aa8.24□□□□□ -1.09
HPS3-205ENST00000478525 SCNN1DP51172 638 aa8.24□□□□□ -1.09
HPS3-205ENST00000478525 HOXB4P17483 251 aaPredicted RBP8.23□□□□□ -1.09
HPS3-205ENST00000478525 COL8A1P27658 744 aa8.23□□□□□ -1.09
HPS3-205ENST00000478525 CTBSQ01459 385 aa8.23□□□□□ -1.09
HPS3-205ENST00000478525 VAC14Q08AM6 782 aa8.23□□□□□ -1.09
HPS3-205ENST00000478525 SLCO4C1Q6ZQN7 724 aa8.23□□□□□ -1.09
HPS3-205ENST00000478525 RRAGCQ9HB90 399 aa8.23□□□□□ -1.09
HPS3-205ENST00000478525 DNAAF2Q9NVR5 837 aaKnown RBP8.23□□□□□ -1.09
HPS3-205ENST00000478525 ATP4AP20648 1035 aa8.22□□□□□ -1.09
HPS3-205ENST00000478525 TBC1D9Q6ZT07 1266 aa8.22□□□□□ -1.09
HPS3-205ENST00000478525 GGA1Q9UJY5 639 aa8.22□□□□□ -1.09
HPS3-205ENST00000478525 GDF10P55107 478 aa8.21□□□□□ -1.1
HPS3-205ENST00000478525 PRM3Q9NNZ6 103 aa8.21□□□□□ -1.1
HPS3-205ENST00000478525 INHAP05111 366 aa8.2□□□□□ -1.1
HPS3-205ENST00000478525 SIRT1Q96EB6 747 aa8.2□□□□□ -1.1
HPS3-205ENST00000478525 SUV39H2Q9H5I1 410 aa8.2□□□□□ -1.1
HPS3-205ENST00000478525 AMPD1P23109 780 aa8.19□□□□□ -1.1
HPS3-205ENST00000478525 GRIN2CQ14957 1233 aa8.19□□□□□ -1.1
HPS3-205ENST00000478525 LINC00114Q6XXX2 140 aa8.19□□□□□ -1.1
HPS3-205ENST00000478525 ZCCHC2Q9C0B9 1178 aaKnown RBP8.19□□□□□ -1.1
HPS3-205ENST00000478525 GDPD2Q9HCC8 539 aa8.19□□□□□ -1.1
HPS3-205ENST00000478525 EPXP11678 715 aa8.18□□□□□ -1.1
HPS3-205ENST00000478525 ABL2P42684 1182 aa8.18□□□□□ -1.1
HPS3-205ENST00000478525 FIGNL1Q6PIW4 674 aa8.18□□□□□ -1.1
HPS3-205ENST00000478525 ALYREFQ86V81 257 aaKnown RBP8.18□□□□□ -1.1
HPS3-205ENST00000478525 ZNF295-AS1Q8N0V1 137 aa8.18□□□□□ -1.1
HPS3-205ENST00000478525 PLPP7Q8NBV4 271 aa8.18□□□□□ -1.1
HPS3-205ENST00000478525 C1orf216Q8TAB5 229 aa8.18□□□□□ -1.1
HPS3-205ENST00000478525 HCN2Q9UL51 889 aa8.18□□□□□ -1.1
HPS3-205ENST00000478525 PCDHGC4Q9Y5F7 938 aa8.18□□□□□ -1.1
HPS3-205ENST00000478525 NEURL1BA8MQ27 555 aa8.17□□□□□ -1.1
HPS3-205ENST00000478525 ARAFP10398 606 aa8.17□□□□□ -1.1
HPS3-205ENST00000478525 BAG6P46379 1132 aa8.17□□□□□ -1.1
HPS3-205ENST00000478525 SMTNP53814 917 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms