RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CABP4P57796 275 aa19.62■□□□□ 0.73
SMARCE1-209ENST00000478349 ITGB4P16144 1822 aa19.62■□□□□ 0.73
SMARCE1-209ENST00000478349 ZNF784Q8NCA9 323 aaPredicted RBP19.61■□□□□ 0.73
SMARCE1-209ENST00000478349 ATG3Q9NT62 314 aa19.61■□□□□ 0.73
SMARCE1-209ENST00000478349 KDRP35968 1356 aa19.6■□□□□ 0.73
SMARCE1-209ENST00000478349 MTHFSP49914 203 aa19.6■□□□□ 0.73
SMARCE1-209ENST00000478349 AMER1Q5JTC6 1135 aaPredicted RBP19.6■□□□□ 0.73
SMARCE1-209ENST00000478349 SULT6B1Q6IMI4 303 aa19.6■□□□□ 0.73
SMARCE1-209ENST00000478349 LINC00116Q8NCU8 138 aa19.6■□□□□ 0.73
SMARCE1-209ENST00000478349 NLGN2Q8NFZ4 835 aa19.6■□□□□ 0.73
SMARCE1-209ENST00000478349 RBM42Q9BTD8 480 aaKnown RBP19.59■□□□□ 0.73
SMARCE1-209ENST00000478349 TAF1LQ8IZX4 1826 aa19.59■□□□□ 0.73
SMARCE1-209ENST00000478349 RTCBQ9Y3I0 505 aaKnown RBP19.58■□□□□ 0.72
SMARCE1-209ENST00000478349 IL13P35225 146 aa19.57■□□□□ 0.72
SMARCE1-209ENST00000478349 ITPK1Q13572 414 aa19.57■□□□□ 0.72
SMARCE1-209ENST00000478349 AEBP1Q8IUX7 1158 aa19.56■□□□□ 0.72
SMARCE1-209ENST00000478349 KDM6AO15550 1401 aaPredicted RBP19.56■□□□□ 0.72
SMARCE1-209ENST00000478349 CNTNAP4Q9C0A0 1308 aa19.55■□□□□ 0.72
SMARCE1-209ENST00000478349 TRAPPC3LQ5T215 181 aa19.55■□□□□ 0.72
SMARCE1-209ENST00000478349 RC3H1Q5TC82 1133 aaKnown RBP19.55■□□□□ 0.72
SMARCE1-209ENST00000478349 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
SMARCE1-209ENST00000478349 ZNF831Q5JPB2 1677 aa19.53■□□□□ 0.72
SMARCE1-209ENST00000478349 NLGN1Q8N2Q7 840 aa19.53■□□□□ 0.72
SMARCE1-209ENST00000478349 UBR3Q6ZT12 1888 aa19.53■□□□□ 0.72
SMARCE1-209ENST00000478349 NPC1L1Q9UHC9 1359 aa19.53■□□□□ 0.72
SMARCE1-209ENST00000478349 DIAPH1O60610 1272 aaKnown RBP19.52■□□□□ 0.72
SMARCE1-209ENST00000478349 AMIGO3Q86WK7 504 aa19.52■□□□□ 0.72
SMARCE1-209ENST00000478349 CHD4Q14839 1912 aa19.52■□□□□ 0.72
SMARCE1-209ENST00000478349 RFC4P35249 363 aa19.51■□□□□ 0.71
SMARCE1-209ENST00000478349 RPS6KA4O75676 772 aa19.5■□□□□ 0.71
SMARCE1-209ENST00000478349 YBX3P16989 372 aaKnown RBP eCLIP19.5■□□□□ 0.712e-7■■□□□ 12.5
SMARCE1-209ENST00000478349 CC2D1BQ5T0F9 858 aaKnown RBP19.5■□□□□ 0.71
SMARCE1-209ENST00000478349 NFATC2IPQ8NCF5 419 aa19.5■□□□□ 0.71
SMARCE1-209ENST00000478349 PER1O15534 1290 aaPredicted RBP19.49■□□□□ 0.71
SMARCE1-209ENST00000478349 PTCD1O75127 700 aaKnown RBP19.49■□□□□ 0.71
SMARCE1-209ENST00000478349 MMP10P09238 476 aa19.49■□□□□ 0.71
SMARCE1-209ENST00000478349 GIGYF1O75420 1035 aaPredicted RBP19.47■□□□□ 0.71
SMARCE1-209ENST00000478349 HMOX1P09601 288 aa19.47■□□□□ 0.71
SMARCE1-209ENST00000478349 SLC4A9Q96Q91 983 aa19.47■□□□□ 0.71
SMARCE1-209ENST00000478349 SLC52A2Q9HAB3 445 aa19.47■□□□□ 0.71
SMARCE1-209ENST00000478349 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
SMARCE1-209ENST00000478349 ARHGEF1Q92888 912 aaKnown RBP19.46■□□□□ 0.71
SMARCE1-209ENST00000478349 CCDC87Q9NVE4 849 aa19.46■□□□□ 0.71
SMARCE1-209ENST00000478349 CRKLP46109 303 aaKnown RBP19.45■□□□□ 0.7
SMARCE1-209ENST00000478349 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
SMARCE1-209ENST00000478349 PARP3Q9Y6F1 533 aa19.45■□□□□ 0.7
SMARCE1-209ENST00000478349 MRC1P22897 1456 aa19.44■□□□□ 0.7
SMARCE1-209ENST00000478349 TGFB2P61812 414 aa19.44■□□□□ 0.7
SMARCE1-209ENST00000478349 UTRNP46939 3433 aa19.43■□□□□ 0.7
SMARCE1-209ENST00000478349 RNMTO43148 476 aaKnown RBP19.43■□□□□ 0.7
SMARCE1-209ENST00000478349 COL5A3P25940 1745 aaPredicted RBP19.42■□□□□ 0.7
SMARCE1-209ENST00000478349 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
SMARCE1-209ENST00000478349 GYS1P13807 737 aa19.42■□□□□ 0.7
SMARCE1-209ENST00000478349 C1QTNF8P60827 252 aa19.42■□□□□ 0.7
SMARCE1-209ENST00000478349 GAS2L2Q8NHY3 880 aa19.42■□□□□ 0.7
SMARCE1-209ENST00000478349 CICQ96RK0 1608 aaPredicted RBP19.42■□□□□ 0.7
SMARCE1-209ENST00000478349 C10orf71Q711Q0 1435 aa19.42■□□□□ 0.7
SMARCE1-209ENST00000478349 TTC5Q8N0Z6 440 aa19.41■□□□□ 0.7
SMARCE1-209ENST00000478349 ZPR1O75312 459 aa19.4■□□□□ 0.7
SMARCE1-209ENST00000478349 MTHFSDQ2M296 383 aaKnown RBP19.4■□□□□ 0.7
SMARCE1-209ENST00000478349 NUDCQ9Y266 331 aa19.4■□□□□ 0.7
SMARCE1-209ENST00000478349 USP42Q9H9J4 1324 aaKnown RBP19.4■□□□□ 0.7
SMARCE1-209ENST00000478349 TEFQ10587 303 aa19.39■□□□□ 0.69
SMARCE1-209ENST00000478349 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
SMARCE1-209ENST00000478349 ATP10DQ9P241 1426 aa19.39■□□□□ 0.69
SMARCE1-209ENST00000478349 PXDNLA1KZ92 1463 aa19.39■□□□□ 0.69
SMARCE1-209ENST00000478349 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
SMARCE1-209ENST00000478349 LGR6Q9HBX8 967 aa19.38■□□□□ 0.69
SMARCE1-209ENST00000478349 GPBP1L1Q9HC44 474 aaPredicted RBP19.38■□□□□ 0.69
SMARCE1-209ENST00000478349 SCN11AQ9UI33 1791 aa19.38■□□□□ 0.69
SMARCE1-209ENST00000478349 COL3A1P02461 1466 aaPredicted RBP19.37■□□□□ 0.69
SMARCE1-209ENST00000478349 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
SMARCE1-209ENST00000478349 DNAJC10Q8IXB1 793 aa19.37■□□□□ 0.69
SMARCE1-209ENST00000478349 C4AP0C0L4 1744 aa19.37■□□□□ 0.69
SMARCE1-209ENST00000478349 GNAT3A8MTJ3 354 aa19.36■□□□□ 0.69
SMARCE1-209ENST00000478349 WWC3Q9ULE0 1092 aa19.36■□□□□ 0.69
SMARCE1-209ENST00000478349 ADCY9O60503 1353 aa19.35■□□□□ 0.69
SMARCE1-209ENST00000478349 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
SMARCE1-209ENST00000478349 STARD3NLO95772 234 aa19.35■□□□□ 0.69
SMARCE1-209ENST00000478349 INTS5Q6P9B9 1019 aaKnown RBP19.35■□□□□ 0.69
SMARCE1-209ENST00000478349 BCS1LQ9Y276 419 aa19.35■□□□□ 0.69
SMARCE1-209ENST00000478349 TJP1Q07157 1748 aa19.34■□□□□ 0.69
SMARCE1-209ENST00000478349 CYP19A1P11511 503 aaPredicted RBP19.34■□□□□ 0.69
SMARCE1-209ENST00000478349 SLC39A6Q13433 755 aa19.34■□□□□ 0.69
SMARCE1-209ENST00000478349 TEX13AQ9BXU3 409 aaPredicted RBP19.34■□□□□ 0.69
SMARCE1-209ENST00000478349 COL15A1P39059 1388 aa19.33■□□□□ 0.69
SMARCE1-209ENST00000478349 A0A0G2JLW4 131 aa19.33■□□□□ 0.68
SMARCE1-209ENST00000478349 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.68
SMARCE1-209ENST00000478349 SRP68Q9UHB9 627 aaKnown RBP19.33■□□□□ 0.68
SMARCE1-209ENST00000478349 KCPQ6ZWJ8 1503 aa19.33■□□□□ 0.68
SMARCE1-209ENST00000478349 GOLGB1Q14789 3259 aaKnown RBP19.33■□□□□ 0.68
SMARCE1-209ENST00000478349 ADAMTS7Q9UKP4 1686 aa19.33■□□□□ 0.68
SMARCE1-209ENST00000478349 A0A087WZG4 1122 aa19.32■□□□□ 0.68
SMARCE1-209ENST00000478349 FCHSD2O94868 740 aa19.32■□□□□ 0.68
SMARCE1-209ENST00000478349 FKBP8Q14318 412 aa19.32■□□□□ 0.68
SMARCE1-209ENST00000478349 KIF13BQ9NQT8 1826 aa19.31■□□□□ 0.68
SMARCE1-209ENST00000478349 DPEP1P16444 411 aa19.31■□□□□ 0.68
SMARCE1-209ENST00000478349 PIM2Q9P1W9 311 aa19.31■□□□□ 0.68
SMARCE1-209ENST00000478349 NARFQ9UHQ1 456 aa19.31■□□□□ 0.68
SMARCE1-209ENST00000478349 PRKAR2BP31323 418 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms