RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 SLCO4C1Q6ZQN7 724 aa9.22□□□□□ -0.93
NCKAP1-204ENST00000477988 C2CD2LO14523 706 aa9.21□□□□□ -0.94
NCKAP1-204ENST00000477988 AP1G2O75843 785 aa9.2□□□□□ -0.94
NCKAP1-204ENST00000477988 BTBD6Q96KE9 485 aa9.2□□□□□ -0.94
NCKAP1-204ENST00000477988 AMPD1P23109 780 aa9.19□□□□□ -0.94
NCKAP1-204ENST00000477988 DGKGP49619 791 aa9.19□□□□□ -0.94
NCKAP1-204ENST00000477988 DOC2BQ14184 412 aa9.19□□□□□ -0.94
NCKAP1-204ENST00000477988 LBRQ14739 615 aaKnown RBP9.19□□□□□ -0.94
NCKAP1-204ENST00000477988 CYP2U1Q7Z449 544 aa9.19□□□□□ -0.94
NCKAP1-204ENST00000477988 PROCA1Q8NCQ7 364 aaPredicted RBP9.19□□□□□ -0.94
NCKAP1-204ENST00000477988 GGA1Q9UJY5 639 aa9.19□□□□□ -0.94
NCKAP1-204ENST00000477988 TRAK2O60296 914 aa9.18□□□□□ -0.94
NCKAP1-204ENST00000477988 DDRGK1Q96HY6 314 aa9.18□□□□□ -0.94
NCKAP1-204ENST00000477988 GPAMQ9HCL2 828 aa9.18□□□□□ -0.94
NCKAP1-204ENST00000477988 NOP53Q9NZM5 478 aaKnown RBP9.18□□□□□ -0.94
NCKAP1-204ENST00000477988 EPXP11678 715 aa9.17□□□□□ -0.94
NCKAP1-204ENST00000477988 ARHGEF10LQ9HCE6 1279 aa9.17□□□□□ -0.94
NCKAP1-204ENST00000477988 NDFIP2Q9NV92 336 aa9.17□□□□□ -0.94
NCKAP1-204ENST00000477988 ATXN7L1Q9ULK2 861 aaPredicted RBP9.17□□□□□ -0.94
NCKAP1-204ENST00000477988 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
NCKAP1-204ENST00000477988 USP17L8P0C7I0 530 aa9.16□□□□□ -0.94
NCKAP1-204ENST00000477988 BMP4P12644 408 aa9.16□□□□□ -0.94
NCKAP1-204ENST00000477988 SCTRP47872 440 aa9.16□□□□□ -0.94
NCKAP1-204ENST00000477988 OSBPL3Q9H4L5 887 aa9.16□□□□□ -0.94
NCKAP1-204ENST00000477988 FOXD4L6Q3SYB3 417 aaPredicted RBP9.15□□□□□ -0.94
NCKAP1-204ENST00000477988 FOXD4L3Q6VB84 417 aaPredicted RBP9.15□□□□□ -0.94
NCKAP1-204ENST00000477988 CTBSQ01459 385 aa9.14□□□□□ -0.95
NCKAP1-204ENST00000477988 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
NCKAP1-204ENST00000477988 ATP1B4Q9UN42 357 aaPredicted RBP9.14□□□□□ -0.95
NCKAP1-204ENST00000477988 PCDHB9Q9Y5E1 797 aa9.14□□□□□ -0.95
NCKAP1-204ENST00000477988 ZBBXA8MT70 800 aa9.13□□□□□ -0.95
NCKAP1-204ENST00000477988 FGFR3P22607 806 aa9.13□□□□□ -0.95
NCKAP1-204ENST00000477988 ABHD17AQ96GS6 310 aa9.13□□□□□ -0.95
NCKAP1-204ENST00000477988 ESYT1Q9BSJ8 1104 aa9.13□□□□□ -0.95
NCKAP1-204ENST00000477988 TRIM34Q9BYJ4 488 aa9.13□□□□□ -0.95
NCKAP1-204ENST00000477988 HRH3Q9Y5N1 445 aa9.13□□□□□ -0.95
NCKAP1-204ENST00000477988 BNIP3LO60238 219 aa9.12□□□□□ -0.95
NCKAP1-204ENST00000477988 ARAFP10398 606 aa9.12□□□□□ -0.95
NCKAP1-204ENST00000477988 PHKA2P46019 1235 aa9.12□□□□□ -0.95
NCKAP1-204ENST00000477988 CENPCQ03188 943 aa9.12□□□□□ -0.95
NCKAP1-204ENST00000477988 RNF135Q8IUD6 432 aa9.12□□□□□ -0.95
NCKAP1-204ENST00000477988 IL2RAP01589 272 aa9.11□□□□□ -0.95
NCKAP1-204ENST00000477988 GATA4P43694 442 aa9.11□□□□□ -0.95
NCKAP1-204ENST00000477988 RSPO4Q2I0M5 234 aaPredicted RBP9.11□□□□□ -0.95
NCKAP1-204ENST00000477988 CNKSR1Q969H4 720 aa9.11□□□□□ -0.95
NCKAP1-204ENST00000477988 KDM4CQ9H3R0 1056 aa9.11□□□□□ -0.95
NCKAP1-204ENST00000477988 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
NCKAP1-204ENST00000477988 RAB6BQ9NRW1 208 aa9.11□□□□□ -0.95
NCKAP1-204ENST00000477988 GNRH1P01148 92 aa9.1□□□□□ -0.95
NCKAP1-204ENST00000477988 KRTAP9-9Q9BYP9 154 aa9.1□□□□□ -0.95
NCKAP1-204ENST00000477988 KRTAP9-4Q9BYQ2 154 aa9.1□□□□□ -0.95
NCKAP1-204ENST00000477988 FAM117AQ9C073 453 aa9.1□□□□□ -0.95
NCKAP1-204ENST00000477988 FBXO45P0C2W1 286 aa9.09□□□□□ -0.95
NCKAP1-204ENST00000477988 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.95
NCKAP1-204ENST00000477988 MSX1P28360 303 aa9.09□□□□□ -0.95
NCKAP1-204ENST00000477988 EFHC2Q5JST6 749 aa9.09□□□□□ -0.95
NCKAP1-204ENST00000477988 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
NCKAP1-204ENST00000477988 CHSY3Q70JA7 882 aa9.09□□□□□ -0.95
NCKAP1-204ENST00000477988 PGBD3Q8N328 593 aa9.09□□□□□ -0.95
NCKAP1-204ENST00000477988 ZSCAN10Q96SZ4 725 aaPredicted RBP9.09□□□□□ -0.95
NCKAP1-204ENST00000477988 FHDC1Q9C0D6 1143 aaPredicted RBP9.09□□□□□ -0.95
NCKAP1-204ENST00000477988 NEURL1BA8MQ27 555 aa9.08□□□□□ -0.96
NCKAP1-204ENST00000477988 C4orf17Q53FE4 359 aa9.08□□□□□ -0.96
NCKAP1-204ENST00000477988 CRISPLD1Q9H336 500 aa9.08□□□□□ -0.96
NCKAP1-204ENST00000477988 SCO2A0A1W2PP80 73 aa9.07□□□□□ -0.96
NCKAP1-204ENST00000477988 ARTNQ5T4W7 220 aa9.07□□□□□ -0.96
NCKAP1-204ENST00000477988 XAGE2Q96GT9 111 aa9.07□□□□□ -0.96
NCKAP1-204ENST00000477988 PCDHB11Q9Y5F2 797 aa9.07□□□□□ -0.96
NCKAP1-204ENST00000477988 RFC5P40937 340 aa9.06□□□□□ -0.96
NCKAP1-204ENST00000477988 MCCD1P59942 119 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-204ENST00000477988 TRIM11Q96F44 468 aa9.06□□□□□ -0.96
NCKAP1-204ENST00000477988 GPBP1L1Q9HC44 474 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-204ENST00000477988 SPATA31C1P0DKV0 1188 aa9.05□□□□□ -0.96
NCKAP1-204ENST00000477988 GNASQ5JWF2 1037 aa9.05□□□□□ -0.96
NCKAP1-204ENST00000477988 ZFP64Q9NPA5 681 aa9.05□□□□□ -0.96
NCKAP1-204ENST00000477988 DNAAF2Q9NVR5 837 aaKnown RBP9.05□□□□□ -0.96
NCKAP1-204ENST00000477988 KLF15Q9UIH9 416 aa9.05□□□□□ -0.96
NCKAP1-204ENST00000477988 TMEM259Q4ZIN3 620 aa9.03□□□□□ -0.96
NCKAP1-204ENST00000477988 TMEM214Q6NUQ4 689 aaKnown RBP9.03□□□□□ -0.96
NCKAP1-204ENST00000477988 KRTAP19-1Q8IUB9 90 aa9.03□□□□□ -0.96
NCKAP1-204ENST00000477988 PLVAPQ9BX97 442 aa9.03□□□□□ -0.96
NCKAP1-204ENST00000477988 GOPCQ9HD26 462 aa9.03□□□□□ -0.96
NCKAP1-204ENST00000477988 FCHSD1Q86WN1 690 aa9.02□□□□□ -0.97
NCKAP1-204ENST00000477988 ESF1Q9H501 851 aaKnown RBP9.02□□□□□ -0.97
NCKAP1-204ENST00000477988 AVENQ9NQS1 362 aaPredicted RBP9.02□□□□□ -0.97
NCKAP1-204ENST00000477988 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.97
NCKAP1-204ENST00000477988 HCN2Q9UL51 889 aa9.02□□□□□ -0.97
NCKAP1-204ENST00000477988 BTBD11A6QL63 1104 aa9.01□□□□□ -0.97
NCKAP1-204ENST00000477988 DYRK3O43781 588 aa9.01□□□□□ -0.97
NCKAP1-204ENST00000477988 ADH6P28332 368 aa9.01□□□□□ -0.97
NCKAP1-204ENST00000477988 FIGNL1Q6PIW4 674 aa9.01□□□□□ -0.97
NCKAP1-204ENST00000477988 ZNF592Q92610 1267 aa9.01□□□□□ -0.97
NCKAP1-204ENST00000477988 ZCCHC2Q9C0B9 1178 aaKnown RBP9.01□□□□□ -0.97
NCKAP1-204ENST00000477988 PCDHGC4Q9Y5F7 938 aa9.01□□□□□ -0.97
NCKAP1-204ENST00000477988 GTF2E1P29083 439 aaPredicted RBP9□□□□□ -0.97
NCKAP1-204ENST00000477988 FAM182BQ5T319 152 aa9□□□□□ -0.97
NCKAP1-204ENST00000477988 RHBDD1Q8TEB9 315 aa9□□□□□ -0.97
NCKAP1-204ENST00000477988 GJD4Q96KN9 370 aaPredicted RBP9□□□□□ -0.97
NCKAP1-204ENST00000477988 KRTAP4-8A0A0G2JLE6 195 aa8.99□□□□□ -0.97
NCKAP1-204ENST00000477988 PPARGC1BQ86YN6 1023 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms