RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 SUV39H2Q9H5I1 410 aa7.11□□□□□ -1.27
PTCD3-212ENST00000477520 TIMMDC1Q9NPL8 285 aa7.11□□□□□ -1.27
PTCD3-212ENST00000477520 KRTAP9-6A0A140TA67 174 aa7.1□□□□□ -1.27
PTCD3-212ENST00000477520 WASLO00401 505 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-212ENST00000477520 WDR44Q5JSH3 913 aa7.1□□□□□ -1.27
PTCD3-212ENST00000477520 CC2D2BQ6DHV5 1058 aa7.1□□□□□ -1.27
PTCD3-212ENST00000477520 RRAGCQ9HB90 399 aa7.1□□□□□ -1.27
PTCD3-212ENST00000477520 GPAMQ9HCL2 828 aa7.1□□□□□ -1.27
PTCD3-212ENST00000477520 ATP1B4Q9UN42 357 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-212ENST00000477520 PCDHB9Q9Y5E1 797 aa7.1□□□□□ -1.27
PTCD3-212ENST00000477520 MROH2BQ7Z745 1585 aa7.1□□□□□ -1.27
PTCD3-212ENST00000477520 CC2D2AQ9P2K1 1620 aa7.09□□□□□ -1.27
PTCD3-212ENST00000477520 SMARCA2P51531 1590 aa7.09□□□□□ -1.27
PTCD3-212ENST00000477520 ITGB7P26010 798 aa7.09□□□□□ -1.27
PTCD3-212ENST00000477520 UBAP2LQ14157 1087 aaKnown RBP7.09□□□□□ -1.27
PTCD3-212ENST00000477520 LINC00114Q6XXX2 140 aa7.09□□□□□ -1.27
PTCD3-212ENST00000477520 TAS1R3Q7RTX0 852 aa7.09□□□□□ -1.27
PTCD3-212ENST00000477520 CFHR5Q9BXR6 569 aa7.09□□□□□ -1.27
PTCD3-212ENST00000477520 FAM117AQ9C073 453 aa7.09□□□□□ -1.27
PTCD3-212ENST00000477520 ARHGEF10LQ9HCE6 1279 aa7.09□□□□□ -1.27
PTCD3-212ENST00000477520 FBXO45P0C2W1 286 aa7.08□□□□□ -1.28
PTCD3-212ENST00000477520 GRIN2CQ14957 1233 aa7.08□□□□□ -1.28
PTCD3-212ENST00000477520 EDARADDQ8WWZ3 215 aa7.08□□□□□ -1.28
PTCD3-212ENST00000477520 OSBPL3Q9H4L5 887 aa7.08□□□□□ -1.28
PTCD3-212ENST00000477520 RSF1Q96T23 1441 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-212ENST00000477520 TRAK2O60296 914 aa7.07□□□□□ -1.28
PTCD3-212ENST00000477520 CYP2U1Q7Z449 544 aa7.07□□□□□ -1.28
PTCD3-212ENST00000477520 ALYREFQ86V81 257 aaKnown RBP7.07□□□□□ -1.28
PTCD3-212ENST00000477520 GPBP1L1Q9HC44 474 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-212ENST00000477520 RAB6BQ9NRW1 208 aa7.07□□□□□ -1.28
PTCD3-212ENST00000477520 ATAD2BQ9ULI0 1458 aa7.06□□□□□ -1.28
PTCD3-212ENST00000477520 ZBBXA8MT70 800 aa7.06□□□□□ -1.28
PTCD3-212ENST00000477520 C1QTNF9BB2RNN3 333 aa7.06□□□□□ -1.28
PTCD3-212ENST00000477520 C2CD2LO14523 706 aa7.06□□□□□ -1.28
PTCD3-212ENST00000477520 RFC5P40937 340 aa7.06□□□□□ -1.28
PTCD3-212ENST00000477520 PHKA2P46019 1235 aa7.06□□□□□ -1.28
PTCD3-212ENST00000477520 TRIM52Q96A61 297 aa7.06□□□□□ -1.28
PTCD3-212ENST00000477520 BCL11AQ9H165 835 aa7.06□□□□□ -1.28
PTCD3-212ENST00000477520 GDF2Q9UK05 429 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-212ENST00000477520 PEG3Q9GZU2 1588 aa7.06□□□□□ -1.28
PTCD3-212ENST00000477520 NCAPD3P42695 1498 aa7.05□□□□□ -1.28
PTCD3-212ENST00000477520 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
PTCD3-212ENST00000477520 KDM4CQ9H3R0 1056 aa7.05□□□□□ -1.28
PTCD3-212ENST00000477520 IL2RAP01589 272 aa7.04□□□□□ -1.28
PTCD3-212ENST00000477520 GOLGA6L1Q8N7Z2 621 aa7.04□□□□□ -1.28
PTCD3-212ENST00000477520 PCDHB11Q9Y5F2 797 aa7.04□□□□□ -1.28
PTCD3-212ENST00000477520 GTF3C3Q9Y5Q9 886 aa7.04□□□□□ -1.28
PTCD3-212ENST00000477520 HMGXB3Q12766 1538 aa7.03□□□□□ -1.28
PTCD3-212ENST00000477520 SUPT5HO00267 1087 aaKnown RBP7.03□□□□□ -1.28
PTCD3-212ENST00000477520 CHRNA4P43681 627 aa7.03□□□□□ -1.28
PTCD3-212ENST00000477520 CENPCQ03188 943 aa7.03□□□□□ -1.28
PTCD3-212ENST00000477520 CNKSR1Q969H4 720 aa7.03□□□□□ -1.28
PTCD3-212ENST00000477520 ABHD17AQ96GS6 310 aa7.03□□□□□ -1.28
PTCD3-212ENST00000477520 GJD4Q96KN9 370 aaPredicted RBP7.03□□□□□ -1.28
PTCD3-212ENST00000477520 RUBCNLQ9H714 662 aa7.03□□□□□ -1.28
PTCD3-212ENST00000477520 GGA1Q9UJY5 639 aa7.03□□□□□ -1.28
PTCD3-212ENST00000477520 PHF24Q9UPV7 400 aa7.03□□□□□ -1.28
PTCD3-212ENST00000477520 HRH3Q9Y5N1 445 aa7.03□□□□□ -1.28
PTCD3-212ENST00000477520 BAZ1BQ9UIG0 1483 aaKnown RBP7.03□□□□□ -1.28
PTCD3-212ENST00000477520 AMPD1P23109 780 aa7.02□□□□□ -1.29
PTCD3-212ENST00000477520 CTBSQ01459 385 aa7.02□□□□□ -1.29
PTCD3-212ENST00000477520 RNF20Q5VTR2 975 aa7.02□□□□□ -1.29
PTCD3-212ENST00000477520 SLCO4C1Q6ZQN7 724 aa7.02□□□□□ -1.29
PTCD3-212ENST00000477520 CCDC125Q86Z20 511 aa7.02□□□□□ -1.29
PTCD3-212ENST00000477520 DDRGK1Q96HY6 314 aa7.02□□□□□ -1.29
PTCD3-212ENST00000477520 ESYT1Q9BSJ8 1104 aa7.02□□□□□ -1.29
PTCD3-212ENST00000477520 WIZO95785 1651 aa7.02□□□□□ -1.29
PTCD3-212ENST00000477520 A0A1B0GTH6 734 aa7.01□□□□□ -1.29
PTCD3-212ENST00000477520 BNIP3LO60238 219 aa7.01□□□□□ -1.29
PTCD3-212ENST00000477520 BMP4P12644 408 aa7.01□□□□□ -1.29
PTCD3-212ENST00000477520 NEUROD1Q13562 356 aa7.01□□□□□ -1.29
PTCD3-212ENST00000477520 BTBD6Q96KE9 485 aa7.01□□□□□ -1.29
PTCD3-212ENST00000477520 NDFIP2Q9NV92 336 aa7.01□□□□□ -1.29
PTCD3-212ENST00000477520 GNB5O14775 395 aa7□□□□□ -1.29
PTCD3-212ENST00000477520 GNRH1P01148 92 aa7□□□□□ -1.29
PTCD3-212ENST00000477520 EPXP11678 715 aa7□□□□□ -1.29
PTCD3-212ENST00000477520 MSX1P28360 303 aa7□□□□□ -1.29
PTCD3-212ENST00000477520 C4orf17Q53FE4 359 aa7□□□□□ -1.29
PTCD3-212ENST00000477520 ANP32EQ9BTT0 268 aa7□□□□□ -1.29
PTCD3-212ENST00000477520 FHDC1Q9C0D6 1143 aaPredicted RBP7□□□□□ -1.29
PTCD3-212ENST00000477520 ATXN7L1Q9ULK2 861 aaPredicted RBP7□□□□□ -1.29
PTCD3-212ENST00000477520 FGFR3P22607 806 aa6.99□□□□□ -1.29
PTCD3-212ENST00000477520 DGKGP49619 791 aa6.99□□□□□ -1.29
PTCD3-212ENST00000477520 DOC2BQ14184 412 aa6.99□□□□□ -1.29
PTCD3-212ENST00000477520 LBRQ14739 615 aaKnown RBP6.99□□□□□ -1.29
PTCD3-212ENST00000477520 ZSCAN10Q96SZ4 725 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-212ENST00000477520 SEMA6BQ9H3T3 888 aa6.99□□□□□ -1.29
PTCD3-212ENST00000477520 TOP2AP11388 1531 aaKnown RBP6.98□□□□□ -1.29
PTCD3-212ENST00000477520 XAGE2Q96GT9 111 aa6.98□□□□□ -1.29
PTCD3-212ENST00000477520 CDCA7Q9BWT1 371 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-212ENST00000477520 GPR37L1O60883 481 aa6.97□□□□□ -1.29
PTCD3-212ENST00000477520 CSB-PGBD3P0DP91 1061 aa6.97□□□□□ -1.29
PTCD3-212ENST00000477520 NR1H3Q13133 447 aa6.97□□□□□ -1.29
PTCD3-212ENST00000477520 RNF135Q8IUD6 432 aa6.97□□□□□ -1.29
PTCD3-212ENST00000477520 KRTAP1-3Q8IUG1 177 aa6.97□□□□□ -1.29
PTCD3-212ENST00000477520 PGBD3Q8N328 593 aa6.97□□□□□ -1.29
PTCD3-212ENST00000477520 HCN2Q9UL51 889 aa6.97□□□□□ -1.29
PTCD3-212ENST00000477520 NEURL1BA8MQ27 555 aa6.96□□□□□ -1.3
PTCD3-212ENST00000477520 STAU1O95793 577 aaKnown RBP6.96□□□□□ -1.3
PTCD3-212ENST00000477520 PRKCSHP14314 528 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms