RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 MMP10P09238 476 aa9.26□□□□□ -0.93
RTFDC1-206ENST00000477485 TNNT2P45379 298 aaPredicted RBP9.26□□□□□ -0.93
RTFDC1-206ENST00000477485 ASAP1Q9ULH1 1129 aa9.26□□□□□ -0.93
RTFDC1-206ENST00000477485 BCS1LQ9Y276 419 aa9.26□□□□□ -0.93
RTFDC1-206ENST00000477485 CEP350Q5VT06 3117 aa9.25□□□□□ -0.93
RTFDC1-206ENST00000477485 ITPK1Q13572 414 aa9.25□□□□□ -0.93
RTFDC1-206ENST00000477485 RBM42Q9BTD8 480 aaKnown RBP9.25□□□□□ -0.93
RTFDC1-206ENST00000477485 ARFGEF1Q9Y6D6 1849 aa9.25□□□□□ -0.93
RTFDC1-206ENST00000477485 WDR90Q96KV7 1748 aa9.25□□□□□ -0.93
RTFDC1-206ENST00000477485 PXDNLA1KZ92 1463 aa9.24□□□□□ -0.93
RTFDC1-206ENST00000477485 ARHGAP27Q6ZUM4 889 aa9.24□□□□□ -0.93
RTFDC1-206ENST00000477485 IFNL2Q8IZJ0 200 aa9.24□□□□□ -0.93
RTFDC1-206ENST00000477485 EYA1Q99502 592 aa9.24□□□□□ -0.93
RTFDC1-206ENST00000477485 RTCBQ9Y3I0 505 aaKnown RBP9.24□□□□□ -0.93
RTFDC1-206ENST00000477485 MYH14Q7Z406 1995 aaKnown RBP9.23□□□□□ -0.93
RTFDC1-206ENST00000477485 A0A0G2JLW4 131 aa9.23□□□□□ -0.93
RTFDC1-206ENST00000477485 PHKG2P15735 406 aa9.23□□□□□ -0.93
RTFDC1-206ENST00000477485 TRAPPC3LQ5T215 181 aa9.23□□□□□ -0.93
RTFDC1-206ENST00000477485 CARD14Q9BXL6 1004 aa9.23□□□□□ -0.93
RTFDC1-206ENST00000477485 ZNF831Q5JPB2 1677 aa9.23□□□□□ -0.93
RTFDC1-206ENST00000477485 CCDC88AQ3V6T2 1871 aa9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 KIF3CO14782 793 aa9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 FCHSD2O94868 740 aa9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 RFC4P35249 363 aa9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 NKX1-1Q15270 411 aaPredicted RBP9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 C16orf71Q8IYS4 520 aaPredicted RBP9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 ATG3Q9NT62 314 aa9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 CCDC87Q9NVE4 849 aa9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 PARP3Q9Y6F1 533 aa9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 WASHC2AQ641Q2 1341 aa9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 NCAPD2Q15021 1401 aa9.22□□□□□ -0.93
RTFDC1-206ENST00000477485 APLP1P51693 650 aa9.21□□□□□ -0.94
RTFDC1-206ENST00000477485 TJP1Q07157 1748 aa9.21□□□□□ -0.94
RTFDC1-206ENST00000477485 SCN11AQ9UI33 1791 aa9.21□□□□□ -0.94
RTFDC1-206ENST00000477485 SBF1O95248 1867 aa9.21□□□□□ -0.94
RTFDC1-206ENST00000477485 C10orf71Q711Q0 1435 aa9.21□□□□□ -0.94
RTFDC1-206ENST00000477485 TNRC6CQ9HCJ0 1690 aaKnown RBP9.2□□□□□ -0.94
RTFDC1-206ENST00000477485 DPEP1P16444 411 aa9.2□□□□□ -0.94
RTFDC1-206ENST00000477485 CABP4P57796 275 aa9.2□□□□□ -0.94
RTFDC1-206ENST00000477485 TGFB2P61812 414 aa9.2□□□□□ -0.94
RTFDC1-206ENST00000477485 EIF4A2Q14240 407 aaKnown RBP9.2□□□□□ -0.94
RTFDC1-206ENST00000477485 NLGN1Q8N2Q7 840 aa9.2□□□□□ -0.94
RTFDC1-206ENST00000477485 NMRK2Q9NPI5 230 aa9.2□□□□□ -0.94
RTFDC1-206ENST00000477485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.941e-7■□□□□ 9.4
RTFDC1-206ENST00000477485 POLKQ9UBT6 870 aa9.2□□□□□ -0.94
RTFDC1-206ENST00000477485 KDRP35968 1356 aa9.2□□□□□ -0.94
RTFDC1-206ENST00000477485 AFDNP55196 1824 aaKnown RBP9.19□□□□□ -0.94
RTFDC1-206ENST00000477485 PTCD1O75127 700 aaKnown RBP9.19□□□□□ -0.94
RTFDC1-206ENST00000477485 TOMM70O94826 608 aa9.19□□□□□ -0.94
RTFDC1-206ENST00000477485 HSP90AB1P08238 724 aaKnown RBP9.19□□□□□ -0.94
RTFDC1-206ENST00000477485 ZNF530Q6P9A1 599 aaPredicted RBP9.19□□□□□ -0.94
RTFDC1-206ENST00000477485 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
RTFDC1-206ENST00000477485 CACNA1SQ13698 1873 aa9.19□□□□□ -0.94
RTFDC1-206ENST00000477485 GYS1P13807 737 aa9.18□□□□□ -0.94
RTFDC1-206ENST00000477485 PLEKHO1Q53GL0 409 aaPredicted RBP9.18□□□□□ -0.94
RTFDC1-206ENST00000477485 C1orf141Q5JVX7 400 aa9.18□□□□□ -0.94
RTFDC1-206ENST00000477485 C9orf131Q5VYM1 1079 aa9.18□□□□□ -0.94
RTFDC1-206ENST00000477485 KCPQ6ZWJ8 1503 aa9.18□□□□□ -0.94
RTFDC1-206ENST00000477485 TIAM2Q8IVF5 1701 aa9.18□□□□□ -0.94
RTFDC1-206ENST00000477485 CNTNAP4Q9C0A0 1308 aa9.18□□□□□ -0.94
RTFDC1-206ENST00000477485 KDM6AO15550 1401 aaPredicted RBP9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 PLEKHG2Q9H7P9 1386 aa9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 ERVV-2B6SEH9 535 aa9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 MTHFSP49914 203 aa9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 NCBP3Q53F19 620 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 DCAF5Q96JK2 942 aa9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 SLC4A9Q96Q91 983 aa9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 RNF181Q9P0P0 153 aa9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 PIM2Q9P1W9 311 aa9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 SRP68Q9UHB9 627 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 DLEC1Q9Y238 1755 aa9.17□□□□□ -0.94
RTFDC1-206ENST00000477485 KDM2BQ8NHM5 1336 aa9.16□□□□□ -0.94
RTFDC1-206ENST00000477485 RPS6KA4O75676 772 aa9.16□□□□□ -0.94
RTFDC1-206ENST00000477485 CRKLP46109 303 aaKnown RBP9.16□□□□□ -0.94
RTFDC1-206ENST00000477485 HTRA3P83110 453 aa9.16□□□□□ -0.94
RTFDC1-206ENST00000477485 DALRD3Q5D0E6 543 aaKnown RBP9.16□□□□□ -0.94
RTFDC1-206ENST00000477485 RC3H1Q5TC82 1133 aaKnown RBP9.16□□□□□ -0.94
RTFDC1-206ENST00000477485 CAPN15O75808 1086 aa9.15□□□□□ -0.94
RTFDC1-206ENST00000477485 CHRNA5P30532 468 aa9.15□□□□□ -0.94
RTFDC1-206ENST00000477485 FKBP8Q14318 412 aa9.15□□□□□ -0.94
RTFDC1-206ENST00000477485 AMOTQ4VCS5 1084 aa9.15□□□□□ -0.94
RTFDC1-206ENST00000477485 NFATC2IPQ8NCF5 419 aa9.15□□□□□ -0.94
RTFDC1-206ENST00000477485 ZPR1O75312 459 aa9.14□□□□□ -0.95
RTFDC1-206ENST00000477485 MORC1Q86VD1 984 aa9.14□□□□□ -0.95
RTFDC1-206ENST00000477485 AEBP1Q8IUX7 1158 aa9.14□□□□□ -0.95
RTFDC1-206ENST00000477485 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
RTFDC1-206ENST00000477485 RRAGCQ9HB90 399 aa9.14□□□□□ -0.95
RTFDC1-206ENST00000477485 ADAMTS7Q9UKP4 1686 aa9.13□□□□□ -0.95
RTFDC1-206ENST00000477485 USP42Q9H9J4 1324 aaKnown RBP9.13□□□□□ -0.95
RTFDC1-206ENST00000477485 DDR1Q08345 913 aa9.13□□□□□ -0.95
RTFDC1-206ENST00000477485 USPL1Q5W0Q7 1092 aa9.13□□□□□ -0.95
RTFDC1-206ENST00000477485 SULT6B1Q6IMI4 303 aa9.13□□□□□ -0.95
RTFDC1-206ENST00000477485 NPM3O75607 178 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-206ENST00000477485 KCNA3P22001 575 aa9.12□□□□□ -0.95
RTFDC1-206ENST00000477485 RASSF7Q02833 373 aa9.12□□□□□ -0.95
RTFDC1-206ENST00000477485 DNAJC5GQ8N7S2 189 aa9.12□□□□□ -0.95
RTFDC1-206ENST00000477485 KLRG1Q96E93 195 aa9.12□□□□□ -0.95
RTFDC1-206ENST00000477485 PCGF6Q9BYE7 350 aa9.12□□□□□ -0.95
RTFDC1-206ENST00000477485 PANK3Q9H999 370 aa9.12□□□□□ -0.95
RTFDC1-206ENST00000477485 DICER1Q9UPY3 1922 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms