RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 SKIV2LQ15477 1246 aaKnown RBP7.66□□□□□ -1.18
XRN1-211ENST00000477237 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.66□□□□□ -1.18
XRN1-211ENST00000477237 GGA1Q9UJY5 639 aa7.66□□□□□ -1.18
XRN1-211ENST00000477237 SCTRP47872 440 aa7.65□□□□□ -1.18
XRN1-211ENST00000477237 SLCO4C1Q6ZQN7 724 aa7.65□□□□□ -1.18
XRN1-211ENST00000477237 BTBD6Q96KE9 485 aa7.65□□□□□ -1.18
XRN1-211ENST00000477237 ARHGEF10LQ9HCE6 1279 aa7.65□□□□□ -1.18
XRN1-211ENST00000477237 USP17L8P0C7I0 530 aa7.64□□□□□ -1.19
XRN1-211ENST00000477237 BMP4P12644 408 aa7.64□□□□□ -1.19
XRN1-211ENST00000477237 PHKA2P46019 1235 aa7.64□□□□□ -1.19
XRN1-211ENST00000477237 CYP2U1Q7Z449 544 aa7.64□□□□□ -1.19
XRN1-211ENST00000477237 PCDHB9Q9Y5E1 797 aa7.64□□□□□ -1.19
XRN1-211ENST00000477237 PIK3R2O00459 728 aa7.63□□□□□ -1.19
XRN1-211ENST00000477237 EPXP11678 715 aa7.63□□□□□ -1.19
XRN1-211ENST00000477237 DGKGP49619 791 aa7.63□□□□□ -1.19
XRN1-211ENST00000477237 CTBSQ01459 385 aa7.63□□□□□ -1.19
XRN1-211ENST00000477237 OSBPL3Q9H4L5 887 aa7.63□□□□□ -1.19
XRN1-211ENST00000477237 TRAK2O60296 914 aa7.62□□□□□ -1.19
XRN1-211ENST00000477237 FOXD4L6Q3SYB3 417 aaPredicted RBP7.62□□□□□ -1.19
XRN1-211ENST00000477237 FOXD4L3Q6VB84 417 aaPredicted RBP7.62□□□□□ -1.19
XRN1-211ENST00000477237 ABHD17AQ96GS6 310 aa7.62□□□□□ -1.19
XRN1-211ENST00000477237 RUBCNLQ9H714 662 aa7.62□□□□□ -1.19
XRN1-211ENST00000477237 RAB6BQ9NRW1 208 aa7.62□□□□□ -1.19
XRN1-211ENST00000477237 ATXN7L1Q9ULK2 861 aaPredicted RBP7.62□□□□□ -1.19
XRN1-211ENST00000477237 A0A1B0GTH6 734 aa7.61□□□□□ -1.19
XRN1-211ENST00000477237 SH3D19Q5HYK7 790 aa7.61□□□□□ -1.19
XRN1-211ENST00000477237 SLC24A3Q9HC58 644 aa7.61□□□□□ -1.19
XRN1-211ENST00000477237 NDFIP2Q9NV92 336 aa7.61□□□□□ -1.19
XRN1-211ENST00000477237 NOP53Q9NZM5 478 aaKnown RBP7.61□□□□□ -1.19
XRN1-211ENST00000477237 BNIP3LO60238 219 aa7.6□□□□□ -1.19
XRN1-211ENST00000477237 FGFR3P22607 806 aa7.6□□□□□ -1.19
XRN1-211ENST00000477237 CENPCQ03188 943 aa7.6□□□□□ -1.19
XRN1-211ENST00000477237 LBRQ14739 615 aaKnown RBP7.6□□□□□ -1.19
XRN1-211ENST00000477237 CCDC125Q86Z20 511 aa7.6□□□□□ -1.19
XRN1-211ENST00000477237 TRIM34Q9BYJ4 488 aa7.6□□□□□ -1.19
XRN1-211ENST00000477237 ATP1B4Q9UN42 357 aaPredicted RBP7.6□□□□□ -1.19
XRN1-211ENST00000477237 ZBBXA8MT70 800 aa7.59□□□□□ -1.19
XRN1-211ENST00000477237 IL2RAP01589 272 aa7.59□□□□□ -1.19
XRN1-211ENST00000477237 RNF135Q8IUD6 432 aa7.59□□□□□ -1.19
XRN1-211ENST00000477237 CNKSR1Q969H4 720 aa7.59□□□□□ -1.19
XRN1-211ENST00000477237 ESYT1Q9BSJ8 1104 aa7.59□□□□□ -1.19
XRN1-211ENST00000477237 SCO2A0A1W2PP80 73 aa7.58□□□□□ -1.2
XRN1-211ENST00000477237 NEURL1BA8MQ27 555 aa7.58□□□□□ -1.2
XRN1-211ENST00000477237 FBXO45P0C2W1 286 aa7.58□□□□□ -1.2
XRN1-211ENST00000477237 CSB-PGBD3P0DP91 1061 aa7.58□□□□□ -1.2
XRN1-211ENST00000477237 MSX1P28360 303 aa7.58□□□□□ -1.2
XRN1-211ENST00000477237 GATA4P43694 442 aa7.58□□□□□ -1.2
XRN1-211ENST00000477237 RSPO4Q2I0M5 234 aaPredicted RBP7.58□□□□□ -1.2
XRN1-211ENST00000477237 RNF20Q5VTR2 975 aa7.58□□□□□ -1.2
XRN1-211ENST00000477237 PGBD3Q8N328 593 aa7.58□□□□□ -1.2
XRN1-211ENST00000477237 ZSCAN10Q96SZ4 725 aaPredicted RBP7.58□□□□□ -1.2
XRN1-211ENST00000477237 PCDHB11Q9Y5F2 797 aa7.58□□□□□ -1.2
XRN1-211ENST00000477237 ARAFP10398 606 aa7.57□□□□□ -1.2
XRN1-211ENST00000477237 C4orf17Q53FE4 359 aa7.57□□□□□ -1.2
XRN1-211ENST00000477237 HRH3Q9Y5N1 445 aa7.57□□□□□ -1.2
XRN1-211ENST00000477237 GNRH1P01148 92 aa7.56□□□□□ -1.2
XRN1-211ENST00000477237 EFHC2Q5JST6 749 aa7.56□□□□□ -1.2
XRN1-211ENST00000477237 CHSY3Q70JA7 882 aa7.56□□□□□ -1.2
XRN1-211ENST00000477237 KRTAP9-9Q9BYP9 154 aa7.56□□□□□ -1.2
XRN1-211ENST00000477237 KRTAP9-4Q9BYQ2 154 aa7.56□□□□□ -1.2
XRN1-211ENST00000477237 NKAPLQ5M9Q1 402 aa7.55□□□□□ -1.2
XRN1-211ENST00000477237 TRIM11Q96F44 468 aa7.55□□□□□ -1.2
XRN1-211ENST00000477237 FHDC1Q9C0D6 1143 aaPredicted RBP7.55□□□□□ -1.2
XRN1-211ENST00000477237 GNASQ5JWF2 1037 aa7.54□□□□□ -1.2
XRN1-211ENST00000477237 XAGE2Q96GT9 111 aa7.54□□□□□ -1.2
XRN1-211ENST00000477237 ESF1Q9H501 851 aaKnown RBP7.54□□□□□ -1.2
XRN1-211ENST00000477237 KLF15Q9UIH9 416 aa7.54□□□□□ -1.2
XRN1-211ENST00000477237 RFC5P40937 340 aa7.53□□□□□ -1.2
XRN1-211ENST00000477237 ARTNQ5T4W7 220 aa7.53□□□□□ -1.2
XRN1-211ENST00000477237 TMEM214Q6NUQ4 689 aaKnown RBP7.53□□□□□ -1.2
XRN1-211ENST00000477237 PLVAPQ9BX97 442 aa7.53□□□□□ -1.2
XRN1-211ENST00000477237 FCHSD1Q86WN1 690 aa7.52□□□□□ -1.21
XRN1-211ENST00000477237 CRISPLD1Q9H336 500 aa7.52□□□□□ -1.21
XRN1-211ENST00000477237 ZFP64Q9NPA5 681 aa7.52□□□□□ -1.21
XRN1-211ENST00000477237 DNAAF2Q9NVR5 837 aaKnown RBP7.52□□□□□ -1.21
XRN1-211ENST00000477237 HCN2Q9UL51 889 aa7.52□□□□□ -1.21
XRN1-211ENST00000477237 SPATA31C1P0DKV0 1188 aa7.51□□□□□ -1.21
XRN1-211ENST00000477237 ZCCHC2Q9C0B9 1178 aaKnown RBP7.51□□□□□ -1.21
XRN1-211ENST00000477237 TPSG1Q9NRR2 321 aa7.51□□□□□ -1.21
XRN1-211ENST00000477237 DYRK3O43781 588 aa7.5□□□□□ -1.21
XRN1-211ENST00000477237 GTF2E1P29083 439 aaPredicted RBP7.5□□□□□ -1.21
XRN1-211ENST00000477237 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
XRN1-211ENST00000477237 FAM117AQ9C073 453 aa7.5□□□□□ -1.21
XRN1-211ENST00000477237 ADH6P28332 368 aa7.49□□□□□ -1.21
XRN1-211ENST00000477237 GJD4Q96KN9 370 aaPredicted RBP7.49□□□□□ -1.21
XRN1-211ENST00000477237 CDCA7Q9BWT1 371 aaPredicted RBP7.49□□□□□ -1.21
XRN1-211ENST00000477237 PCDHGC4Q9Y5F7 938 aa7.49□□□□□ -1.21
XRN1-211ENST00000477237 MCCD1P59942 119 aaPredicted RBP7.48□□□□□ -1.21
XRN1-211ENST00000477237 FIGNL1Q6PIW4 674 aa7.48□□□□□ -1.21
XRN1-211ENST00000477237 RHBDD1Q8TEB9 315 aa7.48□□□□□ -1.21
XRN1-211ENST00000477237 BTBD11A6QL63 1104 aa7.47□□□□□ -1.21
XRN1-211ENST00000477237 STAU1O95793 577 aaKnown RBP7.47□□□□□ -1.21
XRN1-211ENST00000477237 NR1H3Q13133 447 aa7.47□□□□□ -1.21
XRN1-211ENST00000477237 PPARGC1BQ86YN6 1023 aaKnown RBP7.47□□□□□ -1.21
XRN1-211ENST00000477237 ATXN7O15265 892 aaPredicted RBP7.46□□□□□ -1.22
XRN1-211ENST00000477237 CD33P20138 364 aa7.46□□□□□ -1.22
XRN1-211ENST00000477237 PRSS36Q5K4E3 855 aa7.46□□□□□ -1.22
XRN1-211ENST00000477237 NBPF11Q86T75 865 aa7.46□□□□□ -1.22
XRN1-211ENST00000477237 DDRGK1Q96HY6 314 aa7.46□□□□□ -1.22
XRN1-211ENST00000477237 GPBP1L1Q9HC44 474 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms