RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 PHF14O94880 888 aa15.39■□□□□ 0.05
EXOSC1-208ENST00000476234 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
EXOSC1-208ENST00000476234 ZNF526Q8TF50 670 aaPredicted RBP15.39■□□□□ 0.05
EXOSC1-208ENST00000476234 EMILIN1Q9Y6C2 1016 aa15.39■□□□□ 0.05
EXOSC1-208ENST00000476234 KIF13BQ9NQT8 1826 aa15.38■□□□□ 0.05
EXOSC1-208ENST00000476234 KIAA1551Q9HCM1 1747 aa15.38■□□□□ 0.05
EXOSC1-208ENST00000476234 ITPK1Q13572 414 aa15.38■□□□□ 0.05
EXOSC1-208ENST00000476234 CCER1Q8TC90 406 aaPredicted RBP15.38■□□□□ 0.05
EXOSC1-208ENST00000476234 SPG7Q9UQ90 795 aa15.38■□□□□ 0.05
EXOSC1-208ENST00000476234 PXDNLA1KZ92 1463 aa15.37■□□□□ 0.05
EXOSC1-208ENST00000476234 WASHC2AQ641Q2 1341 aa15.37■□□□□ 0.05
EXOSC1-208ENST00000476234 PLEKHG2Q9H7P9 1386 aa15.36■□□□□ 0.05
EXOSC1-208ENST00000476234 CDCA8Q53HL2 280 aa15.36■□□□□ 0.05
EXOSC1-208ENST00000476234 EYA1Q99502 592 aa15.36■□□□□ 0.05
EXOSC1-208ENST00000476234 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
EXOSC1-208ENST00000476234 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
EXOSC1-208ENST00000476234 GNPATO15228 680 aa15.35■□□□□ 0.05
EXOSC1-208ENST00000476234 PHKG2P15735 406 aa15.35■□□□□ 0.05
EXOSC1-208ENST00000476234 DSG3P32926 999 aa15.35■□□□□ 0.05
EXOSC1-208ENST00000476234 TMOD3Q9NYL9 352 aa15.35■□□□□ 0.05
EXOSC1-208ENST00000476234 WWC3Q9ULE0 1092 aa15.35■□□□□ 0.05
EXOSC1-208ENST00000476234 KDRP35968 1356 aa15.35■□□□□ 0.05
EXOSC1-208ENST00000476234 MMP10P09238 476 aa15.34■□□□□ 0.05
EXOSC1-208ENST00000476234 HSPA5P11021 654 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-208ENST00000476234 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
EXOSC1-208ENST00000476234 TGFB2P61812 414 aa15.34■□□□□ 0.05
EXOSC1-208ENST00000476234 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
EXOSC1-208ENST00000476234 ATG3Q9NT62 314 aa15.34■□□□□ 0.05
EXOSC1-208ENST00000476234 C10orf71Q711Q0 1435 aa15.34■□□□□ 0.05
EXOSC1-208ENST00000476234 DNAJC5GQ8N7S2 189 aa15.33■□□□□ 0.04
EXOSC1-208ENST00000476234 TOMM70O94826 608 aa15.32■□□□□ 0.04
EXOSC1-208ENST00000476234 APLP1P51693 650 aa15.32■□□□□ 0.04
EXOSC1-208ENST00000476234 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
EXOSC1-208ENST00000476234 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
EXOSC1-208ENST00000476234 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
EXOSC1-208ENST00000476234 SPINK5Q9NQ38 1064 aaPredicted RBP15.31■□□□□ 0.04
EXOSC1-208ENST00000476234 POLKQ9UBT6 870 aa15.31■□□□□ 0.04
EXOSC1-208ENST00000476234 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
EXOSC1-208ENST00000476234 TRAPPC3LQ5T215 181 aa15.3■□□□□ 0.04
EXOSC1-208ENST00000476234 N4BP2Q86UW6 1770 aaPredicted RBP15.3■□□□□ 0.04
EXOSC1-208ENST00000476234 BRCA1P38398 1863 aaKnown RBP15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 C4AP0C0L4 1744 aa15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 COL5A3P25940 1745 aaPredicted RBP15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 CNTNAP4Q9C0A0 1308 aa15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 A0A0G2JLW4 131 aa15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 ERVV-2B6SEH9 535 aa15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 ZEB1P37275 1124 aaPredicted RBP15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 ARHGEF1Q92888 912 aaKnown RBP15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
EXOSC1-208ENST00000476234 GYS1P13807 737 aa15.28■□□□□ 0.04
EXOSC1-208ENST00000476234 EIF4G2P78344 907 aaKnown RBP eCLIP15.28■□□□□ 0.04
EXOSC1-208ENST00000476234 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
EXOSC1-208ENST00000476234 BCS1LQ9Y276 419 aa15.28■□□□□ 0.04
EXOSC1-208ENST00000476234 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
EXOSC1-208ENST00000476234 RPS6KA4O75676 772 aa15.27■□□□□ 0.04
EXOSC1-208ENST00000476234 DPEP1P16444 411 aa15.27■□□□□ 0.04
EXOSC1-208ENST00000476234 KCNA3P22001 575 aa15.27■□□□□ 0.04
EXOSC1-208ENST00000476234 EIF4A2Q14240 407 aaKnown RBP15.27■□□□□ 0.04
EXOSC1-208ENST00000476234 ARHGAP27Q6ZUM4 889 aa15.26■□□□□ 0.03
EXOSC1-208ENST00000476234 DCAF5Q96JK2 942 aa15.26■□□□□ 0.03
EXOSC1-208ENST00000476234 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
EXOSC1-208ENST00000476234 CCDC87Q9NVE4 849 aa15.26■□□□□ 0.03
EXOSC1-208ENST00000476234 RBM46Q8TBY0 533 aaKnown RBP15.25■□□□□ 0.03
EXOSC1-208ENST00000476234 ARFGEF1Q9Y6D6 1849 aa15.24■□□□□ 0.03
EXOSC1-208ENST00000476234 CAPN15O75808 1086 aa15.24■□□□□ 0.03
EXOSC1-208ENST00000476234 FCHSD2O94868 740 aa15.24■□□□□ 0.03
EXOSC1-208ENST00000476234 HSP90AB1P08238 724 aaKnown RBP15.24■□□□□ 0.03
EXOSC1-208ENST00000476234 KDM6AO15550 1401 aaPredicted RBP15.24■□□□□ 0.03
EXOSC1-208ENST00000476234 MYH14Q7Z406 1995 aaKnown RBP15.24■□□□□ 0.03
EXOSC1-208ENST00000476234 RFC4P35249 363 aa15.23■□□□□ 0.03
EXOSC1-208ENST00000476234 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
EXOSC1-208ENST00000476234 PANK3Q9H999 370 aa15.23■□□□□ 0.03
EXOSC1-208ENST00000476234 PARP3Q9Y6F1 533 aa15.23■□□□□ 0.03
EXOSC1-208ENST00000476234 WDR90Q96KV7 1748 aa15.23■□□□□ 0.03
EXOSC1-208ENST00000476234 C9orf131Q5VYM1 1079 aa15.22■□□□□ 0.03
EXOSC1-208ENST00000476234 FSTL1Q12841 308 aa15.21■□□□□ 0.03
EXOSC1-208ENST00000476234 PLEKHO1Q53GL0 409 aaPredicted RBP15.21■□□□□ 0.03
EXOSC1-208ENST00000476234 JMYQ8N9B5 988 aa15.21■□□□□ 0.03
EXOSC1-208ENST00000476234 PIM2Q9P1W9 311 aa15.21■□□□□ 0.03
EXOSC1-208ENST00000476234 AMOTQ4VCS5 1084 aa15.2■□□□□ 0.02
EXOSC1-208ENST00000476234 USP42Q9H9J4 1324 aaKnown RBP15.19■□□□□ 0.02
EXOSC1-208ENST00000476234 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
EXOSC1-208ENST00000476234 TNNT2P45379 298 aaPredicted RBP15.19■□□□□ 0.02
EXOSC1-208ENST00000476234 CABP4P57796 275 aa15.19■□□□□ 0.02
EXOSC1-208ENST00000476234 DDR1Q08345 913 aa15.19■□□□□ 0.02
EXOSC1-208ENST00000476234 KLRG1Q96E93 195 aa15.19■□□□□ 0.02
EXOSC1-208ENST00000476234 TJP1Q07157 1748 aa15.19■□□□□ 0.02
EXOSC1-208ENST00000476234 CRKLP46109 303 aaKnown RBP15.18■□□□□ 0.02
EXOSC1-208ENST00000476234 FKBP8Q14318 412 aa15.18■□□□□ 0.02
EXOSC1-208ENST00000476234 DALRD3Q5D0E6 543 aaKnown RBP15.18■□□□□ 0.02
EXOSC1-208ENST00000476234 ZNF530Q6P9A1 599 aaPredicted RBP15.18■□□□□ 0.02
EXOSC1-208ENST00000476234 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
EXOSC1-208ENST00000476234 KCPQ6ZWJ8 1503 aa15.17■□□□□ 0.02
EXOSC1-208ENST00000476234 TM4SF1P30408 202 aa15.17■□□□□ 0.02
EXOSC1-208ENST00000476234 INTS5Q6P9B9 1019 aaKnown RBP15.17■□□□□ 0.02
EXOSC1-208ENST00000476234 SRP68Q9UHB9 627 aaKnown RBP15.17■□□□□ 0.02
EXOSC1-208ENST00000476234 KIF7Q2M1P5 1343 aa15.17■□□□□ 0.02
EXOSC1-208ENST00000476234 PTCD1O75127 700 aaKnown RBP15.16■□□□□ 0.02
EXOSC1-208ENST00000476234 MTHFSP49914 203 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms