RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 DAB2P98082 770 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 FANCCQ00597 558 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 SH3RF1Q7Z6J0 888 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 DHX38Q92620 1227 aaKnown RBP7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 UNC93B1Q9H1C4 597 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 CAPN10Q9HC96 672 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 NLRP2Q9NX02 1062 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 PCDHB3Q9Y5E6 796 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 PCDHB11Q9Y5F2 797 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 MAGEB6P1A0A0J9YX57 407 aa7.39□□□□□ -1.23
SRGAP3-205ENST00000475560 EIF5BO60841 1220 aaKnown RBP7.39□□□□□ -1.23
SRGAP3-205ENST00000475560 MAPK8P45983 427 aa7.39□□□□□ -1.23
SRGAP3-205ENST00000475560 APLP1P51693 650 aa7.39□□□□□ -1.23
SRGAP3-205ENST00000475560 PPP4CP60510 307 aa7.39□□□□□ -1.23
SRGAP3-205ENST00000475560 EHHADHQ08426 723 aa7.39□□□□□ -1.23
SRGAP3-205ENST00000475560 PTCRAQ6ISU1 281 aaPredicted RBP7.39□□□□□ -1.23
SRGAP3-205ENST00000475560 CARD14Q9BXL6 1004 aa7.39□□□□□ -1.23
SRGAP3-205ENST00000475560 RNF19AQ9NV58 838 aa7.39□□□□□ -1.23
SRGAP3-205ENST00000475560 ESPNB1AK53 854 aa7.38□□□□□ -1.23
SRGAP3-205ENST00000475560 ERFEQ4G0M1 354 aa7.38□□□□□ -1.23
SRGAP3-205ENST00000475560 ZNF662Q6ZS27 426 aa7.38□□□□□ -1.23
SRGAP3-205ENST00000475560 MRPL50Q8N5N7 158 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-205ENST00000475560 DMRTB1Q96MA1 342 aa7.38□□□□□ -1.23
SRGAP3-205ENST00000475560 PRKD2Q9BZL6 878 aa7.38□□□□□ -1.23
SRGAP3-205ENST00000475560 CCSER2Q9H7U1 834 aa7.38□□□□□ -1.23
SRGAP3-205ENST00000475560 ZNF358Q9NW07 568 aa7.38□□□□□ -1.23
SRGAP3-205ENST00000475560 TLDC2A0PJX2 215 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 IGHA2P01877 340 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 GTF2F1P35269 517 aaKnown RBP eCLIP7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 PSMD2Q13200 908 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 NBPF20Q3BBV1 942 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 SCG3Q8WXD2 468 aaKnown RBP7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 ARMC5Q96C12 935 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 GMLQ99445 158 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 SPSB2Q99619 263 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 CCDC87Q9NVE4 849 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 VTI1BQ9UEU0 232 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 WWC3Q9ULE0 1092 aa7.37□□□□□ -1.23
SRGAP3-205ENST00000475560 ATAD2Q6PL18 1390 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 GOLGA8CPA6NN73 597 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 ZNF76P36508 570 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 AAMPQ13685 434 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 GNL2Q13823 731 aaKnown RBP7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 CCDC144BQ3MJ40 725 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 ALKBH2Q6NS38 261 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 BPHLQ86WA6 291 aaPredicted RBP7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 SEPT12Q8IYM1 358 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 SAP130Q9H0E3 1048 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 ACBD3Q9H3P7 528 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 HCSTQ9UBK5 93 aa7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 TMA7Q9Y2S6 64 aaKnown RBP7.36□□□□□ -1.23
SRGAP3-205ENST00000475560 FZD6O60353 706 aa7.35□□□□□ -1.23
SRGAP3-205ENST00000475560 EIF1AXP47813 144 aaKnown RBP7.35□□□□□ -1.23
SRGAP3-205ENST00000475560 RBL2Q08999 1139 aa7.35□□□□□ -1.23
SRGAP3-205ENST00000475560 C16orf46Q6P387 395 aa7.35□□□□□ -1.23
SRGAP3-205ENST00000475560 VTI1AQ96AJ9 217 aa7.35□□□□□ -1.23
SRGAP3-205ENST00000475560 FAM129BQ96TA1 746 aa7.35□□□□□ -1.23
SRGAP3-205ENST00000475560 PRDM9Q9NQV7 894 aa7.35□□□□□ -1.23
SRGAP3-205ENST00000475560 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.35□□□□□ -1.23
SRGAP3-205ENST00000475560 TMEM229AB2RXF0 380 aa7.34□□□□□ -1.23
SRGAP3-205ENST00000475560 MYCP01106 439 aaPredicted RBP7.34□□□□□ -1.23
SRGAP3-205ENST00000475560 MYT1Q01538 1121 aa7.34□□□□□ -1.23
SRGAP3-205ENST00000475560 ATP2B2Q01814 1243 aa7.34□□□□□ -1.23
SRGAP3-205ENST00000475560 AGERQ15109 404 aa7.34□□□□□ -1.23
SRGAP3-205ENST00000475560 CCDC24Q8N4L8 307 aa7.34□□□□□ -1.23
SRGAP3-205ENST00000475560 BAP1Q92560 729 aa7.34□□□□□ -1.23
SRGAP3-205ENST00000475560 CWC22Q9HCG8 908 aaKnown RBP7.34□□□□□ -1.23
SRGAP3-205ENST00000475560 SBNO2Q9Y2G9 1366 aa7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 BACH1O14867 736 aa7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 TNNI2P48788 182 aa7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 PDE3BQ13370 1112 aa7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 C4orf48Q5BLP8 95 aa7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 TNS4Q8IZW8 715 aa7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 FOXJ1Q92949 421 aa7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 ALKBH8Q96BT7 664 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 SLC10A4Q96EP9 437 aa7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 STIM2Q9P246 746 aa7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 IQSEC3Q9UPP2 1182 aaPredicted RBP7.33□□□□□ -1.24
SRGAP3-205ENST00000475560 GPR182O15218 404 aa7.32□□□□□ -1.24
SRGAP3-205ENST00000475560 DNAJA1P31689 397 aaKnown RBP7.32□□□□□ -1.24
SRGAP3-205ENST00000475560 CHMP7Q8WUX9 453 aaPredicted RBP7.32□□□□□ -1.24
SRGAP3-205ENST00000475560 SETDB2Q96T68 719 aa7.32□□□□□ -1.24
SRGAP3-205ENST00000475560 NIF3L1Q9GZT8 377 aa7.32□□□□□ -1.24
SRGAP3-205ENST00000475560 TSR3Q9UJK0 312 aaKnown RBP7.32□□□□□ -1.24
SRGAP3-205ENST00000475560 HPS5Q9UPZ3 1129 aa7.32□□□□□ -1.24
SRGAP3-205ENST00000475560 EMILIN1Q9Y6C2 1016 aa7.32□□□□□ -1.24
SRGAP3-205ENST00000475560 SOWAHBA6NEL2 793 aa7.31□□□□□ -1.24
SRGAP3-205ENST00000475560 ENOX2Q16206 610 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-205ENST00000475560 COX20Q5RI15 118 aa7.31□□□□□ -1.24
SRGAP3-205ENST00000475560 SOGA3Q5TF21 947 aa7.31□□□□□ -1.24
SRGAP3-205ENST00000475560 ALG1LQ6GMV1 187 aa7.31□□□□□ -1.24
SRGAP3-205ENST00000475560 PLA2G2EQ9NZK7 142 aa7.31□□□□□ -1.24
SRGAP3-205ENST00000475560 CDV3Q9UKY7 258 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-205ENST00000475560 A0A1W2PRU2 124 aa7.3□□□□□ -1.24
SRGAP3-205ENST00000475560 TNFRSF10BO14763 440 aa7.3□□□□□ -1.24
SRGAP3-205ENST00000475560 ARID5AQ03989 594 aa7.3□□□□□ -1.24
SRGAP3-205ENST00000475560 EGFLAMQ63HQ2 1017 aa7.3□□□□□ -1.24
SRGAP3-205ENST00000475560 ANKK1Q8NFD2 765 aa7.3□□□□□ -1.24
SRGAP3-205ENST00000475560 PMFBP1Q8TBY8 1022 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms