RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CALRP27797 417 aaKnown RBP5.96□□□□□ -1.45
NPHP3-206ENST00000474871 LARGE2Q8N3Y3 721 aa5.96□□□□□ -1.45
NPHP3-206ENST00000474871 IRX2Q9BZI1 471 aaPredicted RBP5.96□□□□□ -1.45
NPHP3-206ENST00000474871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.96□□□□□ -1.456e-7■■■■□ 21.1
NPHP3-206ENST00000474871 TPX2Q9ULW0 747 aaKnown RBP5.96□□□□□ -1.45
NPHP3-206ENST00000474871 KANK1Q14678 1352 aa5.96□□□□□ -1.45
NPHP3-206ENST00000474871 IPO7O95373 1038 aaKnown RBP5.96□□□□□ -1.46
NPHP3-206ENST00000474871 HDLBPQ00341 1268 aaKnown RBP5.96□□□□□ -1.46
NPHP3-206ENST00000474871 ICE2Q659A1 982 aa5.96□□□□□ -1.46
NPHP3-206ENST00000474871 NCAPG2Q86XI2 1143 aa5.96□□□□□ -1.46
NPHP3-206ENST00000474871 MKS1Q9NXB0 559 aa5.96□□□□□ -1.46
NPHP3-206ENST00000474871 FAM53CQ9NYF3 392 aa5.96□□□□□ -1.46
NPHP3-206ENST00000474871 MFSD4BQ5TF39 518 aa5.96□□□□□ -1.46
NPHP3-206ENST00000474871 TRIM74Q86UV6 250 aa5.96□□□□□ -1.46
NPHP3-206ENST00000474871 TRIM73Q86UV7 250 aa5.96□□□□□ -1.46
NPHP3-206ENST00000474871 TEX14Q8IWB6 1497 aa5.96□□□□□ -1.46
NPHP3-206ENST00000474871 CXorf56Q9H5V9 222 aa5.96□□□□□ -1.46
NPHP3-206ENST00000474871 MYBL2P10244 700 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 AMOTL1Q8IY63 956 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 CCDC85AQ96PX6 553 aaPredicted RBP5.95□□□□□ -1.46
NPHP3-206ENST00000474871 RBM47A0AV96 593 aaKnown RBP5.95□□□□□ -1.46
NPHP3-206ENST00000474871 CHGAP10645 457 aaKnown RBP5.95□□□□□ -1.46
NPHP3-206ENST00000474871 SLC24A3Q9HC58 644 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 ZNF446Q9NWS9 450 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 MBD5Q9P267 1494 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 NCOA1Q15788 1441 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 ANKRD62A6NC57 917 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 DYNC1I1O14576 645 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 NOM1Q5C9Z4 860 aaKnown RBP5.95□□□□□ -1.46
NPHP3-206ENST00000474871 RNF25Q96BH1 459 aaPredicted RBP5.95□□□□□ -1.46
NPHP3-206ENST00000474871 MAST1Q9Y2H9 1570 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 ARHGAP5Q13017 1502 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 SLC5A9Q2M3M2 681 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 TXNDC2Q86VQ3 553 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 ANKRD13BQ86YJ7 626 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 MORC4Q8TE76 937 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 ZNF512BQ96KM6 892 aaPredicted RBP5.95□□□□□ -1.46
NPHP3-206ENST00000474871 POGKQ9P215 609 aa5.95□□□□□ -1.46
NPHP3-206ENST00000474871 MKRN1Q9UHC7 482 aaKnown RBP5.95□□□□□ -1.46
NPHP3-206ENST00000474871 IPO5O00410 1097 aaKnown RBP5.94□□□□□ -1.46
NPHP3-206ENST00000474871 E2F5Q15329 346 aa5.94□□□□□ -1.46
NPHP3-206ENST00000474871 IQCF2Q8IXL9 164 aa5.94□□□□□ -1.46
NPHP3-206ENST00000474871 SYCP2Q9BX26 1530 aa5.94□□□□□ -1.46
NPHP3-206ENST00000474871 C9orf84Q5VXU9 1444 aa5.94□□□□□ -1.46
NPHP3-206ENST00000474871 COPB2P35606 906 aa5.94□□□□□ -1.46
NPHP3-206ENST00000474871 FAM161AQ3B820 660 aa5.94□□□□□ -1.46
NPHP3-206ENST00000474871 SIN3AQ96ST3 1273 aa5.94□□□□□ -1.46
NPHP3-206ENST00000474871 CCDC141Q6ZP82 1450 aa5.94□□□□□ -1.46
NPHP3-206ENST00000474871 BRD4O60885 1362 aaPredicted RBP5.94□□□□□ -1.46
NPHP3-206ENST00000474871 GTF2F1P35269 517 aaKnown RBP eCLIP5.93□□□□□ -1.46
NPHP3-206ENST00000474871 RASSF7Q02833 373 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 GIMAP1Q8WWP7 306 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 INO80BQ9C086 356 aaPredicted RBP5.93□□□□□ -1.46
NPHP3-206ENST00000474871 SLC45A1Q9Y2W3 748 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 PPFIA2O75334 1257 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 ZRANB2O95218 330 aaKnown RBP eCLIP5.93□□□□□ -1.46
NPHP3-206ENST00000474871 ABL1P00519 1130 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 PEX19P40855 299 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 KCNA1Q09470 495 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 INCENPQ9NQS7 918 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 MAP3K20Q9NYL2 800 aaKnown RBP5.93□□□□□ -1.46
NPHP3-206ENST00000474871 ABCF2Q9UG63 623 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 PLXNC1O60486 1568 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 BMS1Q14692 1282 aaKnown RBP5.93□□□□□ -1.46
NPHP3-206ENST00000474871 RC3H1Q5TC82 1133 aaKnown RBP5.93□□□□□ -1.46
NPHP3-206ENST00000474871 TBC1D7Q9P0N9 293 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 KDM5DQ9BY66 1539 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 ANKRD30AQ9BXX3 1397 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 ARAP3Q8WWN8 1544 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 FRAT2O75474 233 aaPredicted RBP5.93□□□□□ -1.46
NPHP3-206ENST00000474871 FOSBP53539 338 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 PREPLQ4J6C6 727 aaPredicted RBP5.93□□□□□ -1.46
NPHP3-206ENST00000474871 MIGA1Q8NAN2 632 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 PZPP20742 1482 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 WDR7Q9Y4E6 1490 aa5.93□□□□□ -1.46
NPHP3-206ENST00000474871 ABCC1P33527 1531 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 PDIA5Q14554 519 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 FAM184AQ8NB25 1140 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 FAN1Q9Y2M0 1017 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 ABCA9Q8IUA7 1624 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 U2AF1L5P0DN76 240 aaPredicted RBP5.92□□□□□ -1.46
NPHP3-206ENST00000474871 U2AF1Q01081 240 aaKnown RBP eCLIP5.92□□□□□ -1.46
NPHP3-206ENST00000474871 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.92□□□□□ -1.46
NPHP3-206ENST00000474871 PLCH2O75038 1416 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 PLEKHH2Q8IVE3 1493 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 CTAG1AP78358 180 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 LRCH2Q5VUJ6 765 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 ARHGAP27Q6ZUM4 889 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 CLASRPQ8N2M8 674 aaKnown RBP5.92□□□□□ -1.46
NPHP3-206ENST00000474871 PICK1Q9NRD5 415 aa5.92□□□□□ -1.46
NPHP3-206ENST00000474871 FBXO9Q9UK97 447 aaPredicted RBP5.92□□□□□ -1.46
NPHP3-206ENST00000474871 STK10O94804 968 aaKnown RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 JARID2Q92833 1246 aaPredicted RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 THOC1Q96FV9 657 aaKnown RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 ETAA1Q9NY74 926 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 KIAA1107Q9UPP5 1409 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 TSPYL1Q9H0U9 437 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 IQSEC3Q9UPP2 1182 aaPredicted RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 ARHGEF12Q9NZN5 1544 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 KINO60870 393 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms