RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 WDR44Q5JSH3 913 aa8.45□□□□□ -1.06
TMEM50B-208ENST00000474272 TMEM214Q6NUQ4 689 aaKnown RBP8.45□□□□□ -1.06
TMEM50B-208ENST00000474272 ENAMQ9NRM1 1142 aa8.45□□□□□ -1.06
TMEM50B-208ENST00000474272 C4orf17Q53FE4 359 aa8.44□□□□□ -1.06
TMEM50B-208ENST00000474272 OXLD1Q5BKU9 147 aa8.44□□□□□ -1.06
TMEM50B-208ENST00000474272 KANK3Q6NY19 840 aa8.44□□□□□ -1.06
TMEM50B-208ENST00000474272 PHTF2Q8N3S3 785 aa8.44□□□□□ -1.06
TMEM50B-208ENST00000474272 FHDC1Q9C0D6 1143 aaPredicted RBP8.44□□□□□ -1.06
TMEM50B-208ENST00000474272 RUBCNLQ9H714 662 aa8.44□□□□□ -1.06
TMEM50B-208ENST00000474272 DOLKQ9UPQ8 538 aa8.44□□□□□ -1.06
TMEM50B-208ENST00000474272 DNMT3AQ9Y6K1 912 aaPredicted RBP8.44□□□□□ -1.06
TMEM50B-208ENST00000474272 ETNK1Q9HBU6 452 aa8.43□□□□□ -1.06
TMEM50B-208ENST00000474272 GDPD2Q9HCC8 539 aa8.43□□□□□ -1.06
TMEM50B-208ENST00000474272 EIF4G2P78344 907 aaKnown RBP eCLIP8.42□□□□□ -1.06
TMEM50B-208ENST00000474272 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
TMEM50B-208ENST00000474272 GNASQ5JWF2 1037 aa8.42□□□□□ -1.06
TMEM50B-208ENST00000474272 RNF135Q8IUD6 432 aa8.42□□□□□ -1.06
TMEM50B-208ENST00000474272 MSX1P28360 303 aa8.41□□□□□ -1.06
TMEM50B-208ENST00000474272 ABL2P42684 1182 aa8.41□□□□□ -1.06
TMEM50B-208ENST00000474272 USP4Q13107 963 aa8.41□□□□□ -1.06
TMEM50B-208ENST00000474272 A0A1B0GTH6 734 aa8.4□□□□□ -1.06
TMEM50B-208ENST00000474272 GTF2E1P29083 439 aaPredicted RBP8.4□□□□□ -1.06
TMEM50B-208ENST00000474272 UBAP2LQ14157 1087 aaKnown RBP8.4□□□□□ -1.06
TMEM50B-208ENST00000474272 C1orf229Q6ZS94 237 aaPredicted RBP8.4□□□□□ -1.06
TMEM50B-208ENST00000474272 BEND7Q8N7W2 519 aaPredicted RBP8.4□□□□□ -1.06
TMEM50B-208ENST00000474272 OIP5O43482 229 aa8.39□□□□□ -1.07
TMEM50B-208ENST00000474272 SNRPNP63162 240 aaKnown RBP8.39□□□□□ -1.07
TMEM50B-208ENST00000474272 TLR1Q15399 786 aa8.39□□□□□ -1.07
TMEM50B-208ENST00000474272 ESCO1Q5FWF5 840 aa8.39□□□□□ -1.07
TMEM50B-208ENST00000474272 KLRG1Q96E93 195 aa8.39□□□□□ -1.07
TMEM50B-208ENST00000474272 DCAF5Q96JK2 942 aa8.39□□□□□ -1.07
TMEM50B-208ENST00000474272 OXCT2Q9BYC2 517 aaPredicted RBP8.39□□□□□ -1.07
TMEM50B-208ENST00000474272 NSFL1CQ9UNZ2 370 aaKnown RBP8.39□□□□□ -1.07
TMEM50B-208ENST00000474272 SHISA8B8ZZ34 492 aa8.38□□□□□ -1.07
TMEM50B-208ENST00000474272 ABHD17AQ96GS6 310 aa8.38□□□□□ -1.07
TMEM50B-208ENST00000474272 CFHR5Q9BXR6 569 aa8.38□□□□□ -1.07
TMEM50B-208ENST00000474272 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
TMEM50B-208ENST00000474272 C2CD2LO14523 706 aa8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 ITGB2P05107 769 aa8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 CSB-PGBD3P0DP91 1061 aa8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 SCNN1DP51172 638 aa8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 PLA2G4EQ3MJ16 856 aa8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 PODNQ7Z5L7 613 aa8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 PPARGC1BQ86YN6 1023 aaKnown RBP8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 PGBD3Q8N328 593 aa8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 GALNT6Q8NCL4 622 aa8.37□□□□□ -1.07
TMEM50B-208ENST00000474272 PHF20L1A8MW92 1017 aa8.36□□□□□ -1.07
TMEM50B-208ENST00000474272 BNIP3LO60238 219 aa8.36□□□□□ -1.07
TMEM50B-208ENST00000474272 MAP2K3P46734 347 aa8.36□□□□□ -1.07
TMEM50B-208ENST00000474272 GDF10P55107 478 aa8.36□□□□□ -1.07
TMEM50B-208ENST00000474272 CTBSQ01459 385 aa8.36□□□□□ -1.07
TMEM50B-208ENST00000474272 RHBDD1Q8TEB9 315 aa8.36□□□□□ -1.07
TMEM50B-208ENST00000474272 SERTAD1Q9UHV2 236 aa8.36□□□□□ -1.07
TMEM50B-208ENST00000474272 AIDAQ96BJ3 306 aa8.35□□□□□ -1.07
TMEM50B-208ENST00000474272 CHIC2Q9UKJ5 165 aa8.35□□□□□ -1.07
TMEM50B-208ENST00000474272 IGHA1P01876 353 aa8.34□□□□□ -1.07
TMEM50B-208ENST00000474272 INHAP05111 366 aa8.34□□□□□ -1.07
TMEM50B-208ENST00000474272 EFHC2Q5JST6 749 aa8.34□□□□□ -1.07
TMEM50B-208ENST00000474272 PLPP7Q8NBV4 271 aa8.34□□□□□ -1.07
TMEM50B-208ENST00000474272 RRAGCQ9HB90 399 aa8.34□□□□□ -1.07
TMEM50B-208ENST00000474272 PHF24Q9UPV7 400 aa8.34□□□□□ -1.07
TMEM50B-208ENST00000474272 PIK3CDO00329 1044 aa8.33□□□□□ -1.08
TMEM50B-208ENST00000474272 BMP4P12644 408 aa8.33□□□□□ -1.08
TMEM50B-208ENST00000474272 FOXK2Q01167 660 aa8.33□□□□□ -1.08
TMEM50B-208ENST00000474272 EDARADDQ8WWZ3 215 aa8.33□□□□□ -1.08
TMEM50B-208ENST00000474272 FGFR3P22607 806 aa8.32□□□□□ -1.08
TMEM50B-208ENST00000474272 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
TMEM50B-208ENST00000474272 TBC1D9Q6ZT07 1266 aa8.32□□□□□ -1.08
TMEM50B-208ENST00000474272 SIRT1Q96EB6 747 aa8.32□□□□□ -1.08
TMEM50B-208ENST00000474272 SPOCK3Q9BQ16 436 aa8.32□□□□□ -1.08
TMEM50B-208ENST00000474272 LRRC4BQ9NT99 713 aa8.32□□□□□ -1.08
TMEM50B-208ENST00000474272 NDFIP2Q9NV92 336 aa8.32□□□□□ -1.08
TMEM50B-208ENST00000474272 ATXN7L1Q9ULK2 861 aaPredicted RBP8.32□□□□□ -1.08
TMEM50B-208ENST00000474272 USP3Q9Y6I4 520 aa8.32□□□□□ -1.08
TMEM50B-208ENST00000474272 MSTNO14793 375 aa8.31□□□□□ -1.08
TMEM50B-208ENST00000474272 ATP4AP20648 1035 aa8.31□□□□□ -1.08
TMEM50B-208ENST00000474272 SMTNP53814 917 aa8.31□□□□□ -1.08
TMEM50B-208ENST00000474272 ZCCHC2Q9C0B9 1178 aaKnown RBP8.31□□□□□ -1.08
TMEM50B-208ENST00000474272 GGA1Q9UJY5 639 aa8.31□□□□□ -1.08
TMEM50B-208ENST00000474272 HCN2Q9UL51 889 aa8.31□□□□□ -1.08
TMEM50B-208ENST00000474272 TMEM229AB2RXF0 380 aa8.3□□□□□ -1.08
TMEM50B-208ENST00000474272 MCM6Q14566 821 aa8.3□□□□□ -1.08
TMEM50B-208ENST00000474272 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
TMEM50B-208ENST00000474272 NIFKQ9BYG3 293 aaKnown RBP8.3□□□□□ -1.08
TMEM50B-208ENST00000474272 CRISPLD1Q9H336 500 aa8.3□□□□□ -1.08
TMEM50B-208ENST00000474272 DNAAF2Q9NVR5 837 aaKnown RBP8.3□□□□□ -1.08
TMEM50B-208ENST00000474272 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
TMEM50B-208ENST00000474272 KRBA1A5PL33 1030 aa8.29□□□□□ -1.08
TMEM50B-208ENST00000474272 AMPD1P23109 780 aa8.29□□□□□ -1.08
TMEM50B-208ENST00000474272 COL8A1P27658 744 aa8.29□□□□□ -1.08
TMEM50B-208ENST00000474272 WASHC4Q2M389 1173 aa8.29□□□□□ -1.08
TMEM50B-208ENST00000474272 MAP7D1Q3KQU3 841 aa8.29□□□□□ -1.08
TMEM50B-208ENST00000474272 GDF2Q9UK05 429 aaPredicted RBP8.29□□□□□ -1.08
TMEM50B-208ENST00000474272 PROCP04070 461 aa8.28□□□□□ -1.08
TMEM50B-208ENST00000474272 PRKCSHP14314 528 aaPredicted RBP8.28□□□□□ -1.08
TMEM50B-208ENST00000474272 ARSJQ5FYB0 599 aaPredicted RBP8.28□□□□□ -1.08
TMEM50B-208ENST00000474272 GOLGA6L1Q8N7Z2 621 aa8.28□□□□□ -1.08
TMEM50B-208ENST00000474272 SUV39H2Q9H5I1 410 aa8.28□□□□□ -1.08
TMEM50B-208ENST00000474272 A0A1W2PNR3 127 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms