RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
GPNMB-209ENST00000474157 PLPP7Q8NBV4 271 aa9.61□□□□□ -0.87
GPNMB-209ENST00000474157 POGZQ7Z3K3 1410 aa9.61□□□□□ -0.87
GPNMB-209ENST00000474157 KIF27Q86VH2 1401 aa9.61□□□□□ -0.87
GPNMB-209ENST00000474157 BCORL1Q5H9F3 1711 aa9.6□□□□□ -0.87
GPNMB-209ENST00000474157 TRMT44Q8IYL2 757 aaKnown RBP9.6□□□□□ -0.87
GPNMB-209ENST00000474157 VRTNQ9H8Y1 702 aa9.6□□□□□ -0.87
GPNMB-209ENST00000474157 NCOA4Q13772 614 aa9.59□□□□□ -0.87
GPNMB-209ENST00000474157 NBPF20Q3BBV1 942 aa9.59□□□□□ -0.87
GPNMB-209ENST00000474157 CFAP43Q8NDM7 1665 aa9.58□□□□□ -0.88
GPNMB-209ENST00000474157 UBAP1LF5GYI3 381 aa9.58□□□□□ -0.88
GPNMB-209ENST00000474157 VARSP26640 1264 aaKnown RBP9.58□□□□□ -0.88
GPNMB-209ENST00000474157 CANXP27824 592 aaKnown RBP9.58□□□□□ -0.88
GPNMB-209ENST00000474157 MLECQ14165 292 aa9.58□□□□□ -0.88
GPNMB-209ENST00000474157 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
GPNMB-209ENST00000474157 KANK4Q5T7N3 995 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-209ENST00000474157 LIAT1Q6ZQX7 453 aa9.58□□□□□ -0.88
GPNMB-209ENST00000474157 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-209ENST00000474157 CHIC2Q9UKJ5 165 aa9.58□□□□□ -0.88
GPNMB-209ENST00000474157 ATG7O95352 703 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 CD2BP2O95400 341 aaKnown RBP9.57□□□□□ -0.88
GPNMB-209ENST00000474157 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 MAP7D1Q3KQU3 841 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 IFFO2Q5TF58 517 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 TRAF7Q6Q0C0 670 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 FTSJ3Q8IY81 847 aaKnown RBP9.57□□□□□ -0.88
GPNMB-209ENST00000474157 EHBP1Q8NDI1 1231 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 ANP32BQ92688 251 aaKnown RBP9.57□□□□□ -0.88
GPNMB-209ENST00000474157 EMID1Q96A84 441 aaPredicted RBP9.57□□□□□ -0.88
GPNMB-209ENST00000474157 TRAIPQ9BWF2 469 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 PDCL3Q9H2J4 239 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 CDV3Q9UKY7 258 aaKnown RBP9.57□□□□□ -0.88
GPNMB-209ENST00000474157 DOLKQ9UPQ8 538 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 IQGAP2Q13576 1575 aa9.57□□□□□ -0.88
GPNMB-209ENST00000474157 PTPRTO14522 1441 aa9.56□□□□□ -0.88
GPNMB-209ENST00000474157 IQSEC2Q5JU85 1478 aa9.56□□□□□ -0.88
GPNMB-209ENST00000474157 RC3H1Q5TC82 1133 aaKnown RBP9.56□□□□□ -0.88
GPNMB-209ENST00000474157 RNF20Q5VTR2 975 aa9.56□□□□□ -0.88
GPNMB-209ENST00000474157 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
GPNMB-209ENST00000474157 RIMS1Q86UR5 1692 aaKnown RBP9.55□□□□□ -0.88
GPNMB-209ENST00000474157 ESPNB1AK53 854 aa9.55□□□□□ -0.88
GPNMB-209ENST00000474157 RAB15P59190 212 aa9.55□□□□□ -0.88
GPNMB-209ENST00000474157 EML3Q32P44 896 aa9.55□□□□□ -0.88
GPNMB-209ENST00000474157 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
GPNMB-209ENST00000474157 KCTD15Q96SI1 283 aaPredicted RBP9.55□□□□□ -0.88
GPNMB-209ENST00000474157 NEO1Q92859 1461 aa9.54□□□□□ -0.88
GPNMB-209ENST00000474157 LZTS3O60299 673 aaPredicted RBP9.54□□□□□ -0.88
GPNMB-209ENST00000474157 SLC19A1P41440 591 aa9.54□□□□□ -0.88
GPNMB-209ENST00000474157 CEBPAP49715 358 aaPredicted RBP9.54□□□□□ -0.88
GPNMB-209ENST00000474157 VASH1Q7L8A9 365 aaPredicted RBP9.54□□□□□ -0.88
GPNMB-209ENST00000474157 PRDM4Q9UKN5 801 aa9.54□□□□□ -0.88
GPNMB-209ENST00000474157 MAP4K5Q9Y4K4 846 aa9.54□□□□□ -0.88
GPNMB-209ENST00000474157 FANCAO15360 1455 aa9.53□□□□□ -0.88
GPNMB-209ENST00000474157 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
GPNMB-209ENST00000474157 ARID5BQ14865 1188 aa9.53□□□□□ -0.88
GPNMB-209ENST00000474157 SEPT12Q8IYM1 358 aa9.53□□□□□ -0.88
GPNMB-209ENST00000474157 IPO9Q96P70 1041 aaKnown RBP9.53□□□□□ -0.88
GPNMB-209ENST00000474157 PLA2G2EQ9NZK7 142 aa9.53□□□□□ -0.88
GPNMB-209ENST00000474157 USTQ9Y2C2 406 aa9.53□□□□□ -0.88
GPNMB-209ENST00000474157 PCDHB11Q9Y5F2 797 aa9.53□□□□□ -0.88
GPNMB-209ENST00000474157 AKNAQ7Z591 1439 aa9.53□□□□□ -0.88
GPNMB-209ENST00000474157 UGGT2Q9NYU1 1516 aa9.52□□□□□ -0.88
GPNMB-209ENST00000474157 CARNS1A5YM72 827 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L15C9J2P7 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L10C9JJH3 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L13C9JLJ4 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L12C9JPN9 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L11C9JVI0 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L21D6R901 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L18D6R9N7 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L22D6RA61 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L17D6RBQ6 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L19D6RCP7 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L20D6RJB6 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 RASA1P20936 1047 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 ANP32AP39687 249 aaKnown RBP9.52□□□□□ -0.89
GPNMB-209ENST00000474157 USP17L24Q0WX57 530 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 CRTC2Q53ET0 693 aaPredicted RBP9.52□□□□□ -0.89
GPNMB-209ENST00000474157 INTS6LQ5JSJ4 861 aaKnown RBP9.52□□□□□ -0.89
GPNMB-209ENST00000474157 UHRF1BP1Q6BDS2 1440 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 MAP7D2Q96T17 732 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 CDCA7Q9BWT1 371 aaPredicted RBP9.52□□□□□ -0.89
GPNMB-209ENST00000474157 TLL2Q9Y6L7 1015 aa9.52□□□□□ -0.89
GPNMB-209ENST00000474157 LOC105371045A0A1W2PR82 267 aa9.51□□□□□ -0.89
GPNMB-209ENST00000474157 FAM196BA6NMK8 535 aa9.51□□□□□ -0.89
GPNMB-209ENST00000474157 NEFMP07197 916 aa9.51□□□□□ -0.89
GPNMB-209ENST00000474157 DHX37Q8IY37 1157 aaKnown RBP9.51□□□□□ -0.89
GPNMB-209ENST00000474157 ZMIZ1Q9ULJ6 1067 aa9.51□□□□□ -0.89
GPNMB-209ENST00000474157 NOVA2Q9UNW9 492 aaKnown RBP9.51□□□□□ -0.89
GPNMB-209ENST00000474157 NOD1Q9Y239 953 aa9.51□□□□□ -0.89
GPNMB-209ENST00000474157 A0A0G2JS52 829 aa9.5□□□□□ -0.89
GPNMB-209ENST00000474157 FSHRP23945 695 aa9.5□□□□□ -0.89
GPNMB-209ENST00000474157 HSPA1LP34931 641 aa9.5□□□□□ -0.89
GPNMB-209ENST00000474157 ELOAQ14241 798 aaKnown RBP9.5□□□□□ -0.89
GPNMB-209ENST00000474157 LARP1Q6PKG0 1096 aaKnown RBP9.5□□□□□ -0.89
GPNMB-209ENST00000474157 CDK15Q96Q40 435 aa9.5□□□□□ -0.89
GPNMB-209ENST00000474157 DENND4BO75064 1496 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-209ENST00000474157 LTBP4Q8N2S1 1624 aa9.49□□□□□ -0.89
GPNMB-209ENST00000474157 WNT7AO00755 349 aa9.49□□□□□ -0.89
GPNMB-209ENST00000474157 PTK7Q13308 1070 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms