RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 GPBP1L1Q9HC44 474 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-210ENST00000474000 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
COL16A1-210ENST00000474000 TAF1LQ8IZX4 1826 aa16.46■□□□□ 0.23
COL16A1-210ENST00000474000 C4BP0C0L5 1744 aa16.45■□□□□ 0.22
COL16A1-210ENST00000474000 ZNF526Q8TF50 670 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-210ENST00000474000 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
COL16A1-210ENST00000474000 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
COL16A1-210ENST00000474000 PLEKHG2Q9H7P9 1386 aa16.44■□□□□ 0.22
COL16A1-210ENST00000474000 GNPATO15228 680 aa16.44■□□□□ 0.22
COL16A1-210ENST00000474000 HSP90AB1P08238 724 aaKnown RBP16.44■□□□□ 0.22
COL16A1-210ENST00000474000 AMOTQ4VCS5 1084 aa16.44■□□□□ 0.22
COL16A1-210ENST00000474000 IFFO2Q5TF58 517 aa16.44■□□□□ 0.22
COL16A1-210ENST00000474000 ITGB4P16144 1822 aa16.44■□□□□ 0.22
COL16A1-210ENST00000474000 PKD1L3Q7Z443 1732 aa16.43■□□□□ 0.22
COL16A1-210ENST00000474000 ANKRD26Q9UPS8 1709 aa16.43■□□□□ 0.22
COL16A1-210ENST00000474000 AEBP1Q8IUX7 1158 aa16.43■□□□□ 0.22
COL16A1-210ENST00000474000 ADCY9O60503 1353 aa16.42■□□□□ 0.22
COL16A1-210ENST00000474000 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
COL16A1-210ENST00000474000 SLC4A9Q96Q91 983 aa16.42■□□□□ 0.22
COL16A1-210ENST00000474000 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
COL16A1-210ENST00000474000 MTHFSP49914 203 aa16.41■□□□□ 0.22
COL16A1-210ENST00000474000 CABP4P57796 275 aa16.41■□□□□ 0.22
COL16A1-210ENST00000474000 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
COL16A1-210ENST00000474000 UBR3Q6ZT12 1888 aa16.4■□□□□ 0.22
COL16A1-210ENST00000474000 IL13P35225 146 aa16.4■□□□□ 0.22
COL16A1-210ENST00000474000 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
COL16A1-210ENST00000474000 TRAPPC3LQ5T215 181 aa16.4■□□□□ 0.22
COL16A1-210ENST00000474000 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
COL16A1-210ENST00000474000 HSPA6P17066 643 aa16.39■□□□□ 0.21
COL16A1-210ENST00000474000 C1orf141Q5JVX7 400 aa16.39■□□□□ 0.21
COL16A1-210ENST00000474000 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
COL16A1-210ENST00000474000 RC3H1Q5TC82 1133 aaKnown RBP16.38■□□□□ 0.21
COL16A1-210ENST00000474000 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
COL16A1-210ENST00000474000 KIF7Q2M1P5 1343 aa16.38■□□□□ 0.21
COL16A1-210ENST00000474000 MMP10P09238 476 aa16.37■□□□□ 0.21
COL16A1-210ENST00000474000 ARHGEF1Q92888 912 aaKnown RBP16.37■□□□□ 0.21
COL16A1-210ENST00000474000 KDRP35968 1356 aa16.37■□□□□ 0.21
COL16A1-210ENST00000474000 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
COL16A1-210ENST00000474000 KIF3CO14782 793 aa16.36■□□□□ 0.21
COL16A1-210ENST00000474000 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
COL16A1-210ENST00000474000 NLGN1Q8N2Q7 840 aa16.36■□□□□ 0.21
COL16A1-210ENST00000474000 PER1O15534 1290 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-210ENST00000474000 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
COL16A1-210ENST00000474000 ADRA2BP18089 450 aa16.34■□□□□ 0.21
COL16A1-210ENST00000474000 RFC4P35249 363 aa16.34■□□□□ 0.21
COL16A1-210ENST00000474000 CNTNAP4Q9C0A0 1308 aa16.34■□□□□ 0.21
COL16A1-210ENST00000474000 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
COL16A1-210ENST00000474000 GYS1P13807 737 aa16.32■□□□□ 0.2
COL16A1-210ENST00000474000 TGFB2P61812 414 aa16.32■□□□□ 0.2
COL16A1-210ENST00000474000 AKAP4Q5JQC9 854 aa16.32■□□□□ 0.2
COL16A1-210ENST00000474000 CC2D1BQ5T0F9 858 aaKnown RBP16.32■□□□□ 0.2
COL16A1-210ENST00000474000 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
COL16A1-210ENST00000474000 BCS1LQ9Y276 419 aa16.32■□□□□ 0.2
COL16A1-210ENST00000474000 PXDNLA1KZ92 1463 aa16.31■□□□□ 0.2
COL16A1-210ENST00000474000 HMOX1P09601 288 aa16.31■□□□□ 0.2
COL16A1-210ENST00000474000 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
COL16A1-210ENST00000474000 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
COL16A1-210ENST00000474000 DPEP1P16444 411 aa16.29■□□□□ 0.2
COL16A1-210ENST00000474000 ARHGAP27Q6ZUM4 889 aa16.29■□□□□ 0.2
COL16A1-210ENST00000474000 SLC52A2Q9HAB3 445 aa16.29■□□□□ 0.2
COL16A1-210ENST00000474000 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
COL16A1-210ENST00000474000 MTHFSDQ2M296 383 aaKnown RBP16.28■□□□□ 0.2
COL16A1-210ENST00000474000 INTS5Q6P9B9 1019 aaKnown RBP16.28■□□□□ 0.2
COL16A1-210ENST00000474000 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
COL16A1-210ENST00000474000 CICQ96RK0 1608 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-210ENST00000474000 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
COL16A1-210ENST00000474000 FCHSD2O94868 740 aa16.27■□□□□ 0.2
COL16A1-210ENST00000474000 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-210ENST00000474000 SRP68Q9UHB9 627 aaKnown RBP16.27■□□□□ 0.2
COL16A1-210ENST00000474000 N4BP2Q86UW6 1770 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-210ENST00000474000 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
COL16A1-210ENST00000474000 TOMM70O94826 608 aa16.26■□□□□ 0.19
COL16A1-210ENST00000474000 KCNA3P22001 575 aa16.26■□□□□ 0.19
COL16A1-210ENST00000474000 SLC39A6Q13433 755 aa16.26■□□□□ 0.19
COL16A1-210ENST00000474000 FKBP8Q14318 412 aa16.26■□□□□ 0.19
COL16A1-210ENST00000474000 DNAJC10Q8IXB1 793 aa16.26■□□□□ 0.19
COL16A1-210ENST00000474000 C10orf71Q711Q0 1435 aa16.26■□□□□ 0.19
COL16A1-210ENST00000474000 KIF13BQ9NQT8 1826 aa16.26■□□□□ 0.19
COL16A1-210ENST00000474000 USP42Q9H9J4 1324 aaKnown RBP16.24■□□□□ 0.19
COL16A1-210ENST00000474000 APLP1P51693 650 aa16.24■□□□□ 0.19
COL16A1-210ENST00000474000 NMRK2Q9NPI5 230 aa16.24■□□□□ 0.19
COL16A1-210ENST00000474000 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
COL16A1-210ENST00000474000 DNAJC5GQ8N7S2 189 aa16.23■□□□□ 0.19
COL16A1-210ENST00000474000 ZNF831Q5JPB2 1677 aa16.22■□□□□ 0.19
COL16A1-210ENST00000474000 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
COL16A1-210ENST00000474000 ZPR1O75312 459 aa16.22■□□□□ 0.19
COL16A1-210ENST00000474000 TM4SF1P30408 202 aa16.22■□□□□ 0.19
COL16A1-210ENST00000474000 DDR1Q08345 913 aa16.22■□□□□ 0.19
COL16A1-210ENST00000474000 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
COL16A1-210ENST00000474000 NPC1L1Q9UHC9 1359 aa16.22■□□□□ 0.19
COL16A1-210ENST00000474000 C4AP0C0L4 1744 aa16.22■□□□□ 0.19
COL16A1-210ENST00000474000 MYH14Q7Z406 1995 aaKnown RBP16.21■□□□□ 0.19
COL16A1-210ENST00000474000 USPL1Q5W0Q7 1092 aa16.21■□□□□ 0.19
COL16A1-210ENST00000474000 PIM2Q9P1W9 311 aa16.21■□□□□ 0.19
COL16A1-210ENST00000474000 COL5A3P25940 1745 aaPredicted RBP16.21■□□□□ 0.19
COL16A1-210ENST00000474000 VSIG10Q8N0Z9 540 aa16.2■□□□□ 0.18
COL16A1-210ENST00000474000 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
COL16A1-210ENST00000474000 POLRMTO00411 1230 aaKnown RBP16.19■□□□□ 0.18
COL16A1-210ENST00000474000 IL17REQ8NFR9 667 aa16.19■□□□□ 0.18
COL16A1-210ENST00000474000 CHRNA5P30532 468 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms