RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 BMP4P12644 408 aa6.07□□□□□ -1.44
CCDC39-203ENST00000473854 LINC00114Q6XXX2 140 aa6.07□□□□□ -1.44
CCDC39-203ENST00000473854 CD163Q86VB7 1156 aa6.07□□□□□ -1.44
CCDC39-203ENST00000473854 SEMA6BQ9H3T3 888 aa6.07□□□□□ -1.44
CCDC39-203ENST00000473854 MCCD1P59942 119 aaPredicted RBP6.06□□□□□ -1.44
CCDC39-203ENST00000473854 EFHC2Q5JST6 749 aa6.06□□□□□ -1.44
CCDC39-203ENST00000473854 SCO2A0A1W2PP80 73 aa6.05□□□□□ -1.44
CCDC39-203ENST00000473854 AP1G2O75843 785 aa6.05□□□□□ -1.44
CCDC39-203ENST00000473854 SKIV2LQ15477 1246 aaKnown RBP6.05□□□□□ -1.44
CCDC39-203ENST00000473854 C1orf229Q6ZS94 237 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-203ENST00000473854 SUV39H2Q9H5I1 410 aa6.05□□□□□ -1.44
CCDC39-203ENST00000473854 ATP1B4Q9UN42 357 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-203ENST00000473854 ARAFP10398 606 aa6.04□□□□□ -1.44
CCDC39-203ENST00000473854 EPXP11678 715 aa6.04□□□□□ -1.44
CCDC39-203ENST00000473854 GATA4P43694 442 aa6.04□□□□□ -1.44
CCDC39-203ENST00000473854 DGKGP49619 791 aa6.04□□□□□ -1.44
CCDC39-203ENST00000473854 GPAMQ9HCL2 828 aa6.04□□□□□ -1.44
CCDC39-203ENST00000473854 GGA1Q9UJY5 639 aa6.04□□□□□ -1.44
CCDC39-203ENST00000473854 PCDHB9Q9Y5E1 797 aa6.04□□□□□ -1.44
CCDC39-203ENST00000473854 HOXB4P17483 251 aaPredicted RBP6.03□□□□□ -1.44
CCDC39-203ENST00000473854 CHRNA4P43681 627 aa6.03□□□□□ -1.44
CCDC39-203ENST00000473854 SH3D19Q5HYK7 790 aa6.03□□□□□ -1.44
CCDC39-203ENST00000473854 GNASQ5JWF2 1037 aa6.03□□□□□ -1.44
CCDC39-203ENST00000473854 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
CCDC39-203ENST00000473854 BTBD6Q96KE9 485 aa6.03□□□□□ -1.44
CCDC39-203ENST00000473854 ZBBXA8MT70 800 aa6.02□□□□□ -1.45
CCDC39-203ENST00000473854 GIGYF1O75420 1035 aaPredicted RBP6.02□□□□□ -1.45
CCDC39-203ENST00000473854 GNRH1P01148 92 aa6.02□□□□□ -1.45
CCDC39-203ENST00000473854 USP17L8P0C7I0 530 aa6.02□□□□□ -1.45
CCDC39-203ENST00000473854 FGFR3P22607 806 aa6.02□□□□□ -1.45
CCDC39-203ENST00000473854 DOC2BQ14184 412 aa6.02□□□□□ -1.45
CCDC39-203ENST00000473854 LCE1DQ5T752 114 aa6.02□□□□□ -1.45
CCDC39-203ENST00000473854 FIGNL1Q6PIW4 674 aa6.02□□□□□ -1.45
CCDC39-203ENST00000473854 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.02□□□□□ -1.45
CCDC39-203ENST00000473854 ARHGEF10LQ9HCE6 1279 aa6.02□□□□□ -1.45
CCDC39-203ENST00000473854 SPDYE3A6NKU9 549 aa6.01□□□□□ -1.45
CCDC39-203ENST00000473854 SPATA31C1P0DKV0 1188 aa6.01□□□□□ -1.45
CCDC39-203ENST00000473854 RNF135Q8IUD6 432 aa6.01□□□□□ -1.45
CCDC39-203ENST00000473854 ZSCAN10Q96SZ4 725 aaPredicted RBP6.01□□□□□ -1.45
CCDC39-203ENST00000473854 ESYT1Q9BSJ8 1104 aa6.01□□□□□ -1.45
CCDC39-203ENST00000473854 ZNF330Q9Y3S2 320 aaPredicted RBP6.01□□□□□ -1.45
CCDC39-203ENST00000473854 TRAK2O60296 914 aa6□□□□□ -1.45
CCDC39-203ENST00000473854 ITGB7P26010 798 aa6□□□□□ -1.45
CCDC39-203ENST00000473854 NBPF11Q86T75 865 aa6□□□□□ -1.45
CCDC39-203ENST00000473854 EPS8L1Q8TE68 723 aa6□□□□□ -1.45
CCDC39-203ENST00000473854 ZFP64Q9NPA5 681 aa6□□□□□ -1.45
CCDC39-203ENST00000473854 AVENQ9NQS1 362 aaPredicted RBP6□□□□□ -1.45
CCDC39-203ENST00000473854 THBS1P07996 1170 aa5.99□□□□□ -1.45
CCDC39-203ENST00000473854 ADH6P28332 368 aa5.99□□□□□ -1.45
CCDC39-203ENST00000473854 UBAP2LQ14157 1087 aaKnown RBP5.99□□□□□ -1.45
CCDC39-203ENST00000473854 TMEM214Q6NUQ4 689 aaKnown RBP5.99□□□□□ -1.45
CCDC39-203ENST00000473854 CNKSR1Q969H4 720 aa5.99□□□□□ -1.45
CCDC39-203ENST00000473854 ABHD17AQ96GS6 310 aa5.99□□□□□ -1.45
CCDC39-203ENST00000473854 GOLGA2P5Q9HBQ8 144 aa5.99□□□□□ -1.45
CCDC39-203ENST00000473854 HMX1Q9NP08 348 aaPredicted RBP5.99□□□□□ -1.45
CCDC39-203ENST00000473854 MYCP01106 439 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-203ENST00000473854 CENPCQ03188 943 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 ESCO1Q5FWF5 840 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 ARTNQ5T4W7 220 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 CHSY3Q70JA7 882 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 DDRGK1Q96HY6 314 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 CRISPLD1Q9H336 500 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 OSBPL3Q9H4L5 887 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 RUBCNLQ9H714 662 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 NDFIP2Q9NV92 336 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 PCDHB11Q9Y5F2 797 aa5.98□□□□□ -1.45
CCDC39-203ENST00000473854 NEURL1BA8MQ27 555 aa5.97□□□□□ -1.45
CCDC39-203ENST00000473854 C2CD2LO14523 706 aa5.97□□□□□ -1.45
CCDC39-203ENST00000473854 MSX1P28360 303 aa5.97□□□□□ -1.45
CCDC39-203ENST00000473854 PHKA2P46019 1235 aa5.97□□□□□ -1.45
CCDC39-203ENST00000473854 BNIP3LO60238 219 aa5.96□□□□□ -1.46
CCDC39-203ENST00000473854 APBA3O96018 575 aa5.96□□□□□ -1.46
CCDC39-203ENST00000473854 CTBSQ01459 385 aa5.96□□□□□ -1.46
CCDC39-203ENST00000473854 RSPO4Q2I0M5 234 aaPredicted RBP5.96□□□□□ -1.46
CCDC39-203ENST00000473854 PRRT3Q5FWE3 981 aa5.96□□□□□ -1.46
CCDC39-203ENST00000473854 C1orf216Q8TAB5 229 aa5.96□□□□□ -1.46
CCDC39-203ENST00000473854 RHBDD1Q8TEB9 315 aa5.96□□□□□ -1.46
CCDC39-203ENST00000473854 PCDHGC4Q9Y5F7 938 aa5.96□□□□□ -1.46
CCDC39-203ENST00000473854 FBXO45P0C2W1 286 aa5.95□□□□□ -1.46
CCDC39-203ENST00000473854 SCTRP47872 440 aa5.95□□□□□ -1.46
CCDC39-203ENST00000473854 C4orf17Q53FE4 359 aa5.95□□□□□ -1.46
CCDC39-203ENST00000473854 FAM182BQ5T319 152 aa5.95□□□□□ -1.46
CCDC39-203ENST00000473854 NLRP8Q86W28 1048 aa5.95□□□□□ -1.46
CCDC39-203ENST00000473854 PROCA1Q8NCQ7 364 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-203ENST00000473854 XAGE2Q96GT9 111 aa5.95□□□□□ -1.46
CCDC39-203ENST00000473854 NACC1Q96RE7 527 aa5.95□□□□□ -1.46
CCDC39-203ENST00000473854 RAB6BQ9NRW1 208 aa5.95□□□□□ -1.46
CCDC39-203ENST00000473854 IL2RAP01589 272 aa5.94□□□□□ -1.46
CCDC39-203ENST00000473854 NKAPLQ5M9Q1 402 aa5.94□□□□□ -1.46
CCDC39-203ENST00000473854 TBC1D9Q6ZT07 1266 aa5.94□□□□□ -1.46
CCDC39-203ENST00000473854 PLVAPQ9BX97 442 aa5.94□□□□□ -1.46
CCDC39-203ENST00000473854 DYRK3O43781 588 aa5.93□□□□□ -1.46
CCDC39-203ENST00000473854 TMEM259Q4ZIN3 620 aa5.93□□□□□ -1.46
CCDC39-203ENST00000473854 FBXO31Q5XUX0 539 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-203ENST00000473854 TRIM34Q9BYJ4 488 aa5.93□□□□□ -1.46
CCDC39-203ENST00000473854 FHDC1Q9C0D6 1143 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-203ENST00000473854 HRH3Q9Y5N1 445 aa5.93□□□□□ -1.46
CCDC39-203ENST00000473854 RFC5P40937 340 aa5.92□□□□□ -1.46
CCDC39-203ENST00000473854 NR1H3Q13133 447 aa5.92□□□□□ -1.46
CCDC39-203ENST00000473854 TRIM11Q96F44 468 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms