RNA–Protein interactions for RNA: ENST00000472822.5

KDM5B-207, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best)

Gene KDM5B, Length 1,648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-207ENST00000472822 CCDC9Q9Y3X0 531 aaKnown RBP11.86□□□□□ -0.51
KDM5B-207ENST00000472822 MRC1P22897 1456 aa11.86□□□□□ -0.51
KDM5B-207ENST00000472822 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
KDM5B-207ENST00000472822 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
KDM5B-207ENST00000472822 NFATC2IPQ8NCF5 419 aa11.86□□□□□ -0.51
KDM5B-207ENST00000472822 BABAM1Q9NWV8 329 aa11.86□□□□□ -0.51
KDM5B-207ENST00000472822 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
KDM5B-207ENST00000472822 TNS2Q63HR2 1409 aa11.85□□□□□ -0.51
KDM5B-207ENST00000472822 EXOC5O00471 708 aa11.85□□□□□ -0.51
KDM5B-207ENST00000472822 PLIN1O60240 522 aa11.85□□□□□ -0.51
KDM5B-207ENST00000472822 RNF39Q9H2S5 420 aa11.85□□□□□ -0.51
KDM5B-207ENST00000472822 SLC52A2Q9HAB3 445 aa11.85□□□□□ -0.51
KDM5B-207ENST00000472822 HSP90AB1P08238 724 aaKnown RBP11.84□□□□□ -0.51
KDM5B-207ENST00000472822 RRP1P56182 461 aaKnown RBP11.84□□□□□ -0.51
KDM5B-207ENST00000472822 IRX6P78412 446 aaPredicted RBP11.84□□□□□ -0.51
KDM5B-207ENST00000472822 TEFQ10587 303 aa11.84□□□□□ -0.51
KDM5B-207ENST00000472822 MARCH10Q8NA82 808 aaPredicted RBP11.84□□□□□ -0.51
KDM5B-207ENST00000472822 SSH1Q8WYL5 1049 aa11.84□□□□□ -0.51
KDM5B-207ENST00000472822 GJD4Q96KN9 370 aaPredicted RBP11.84□□□□□ -0.51
KDM5B-207ENST00000472822 CDCA7Q9BWT1 371 aaPredicted RBP11.84□□□□□ -0.51
KDM5B-207ENST00000472822 THSD7AQ9UPZ6 1657 aa11.84□□□□□ -0.51
KDM5B-207ENST00000472822 CT47B1P0C2W7 299 aaPredicted RBP11.83□□□□□ -0.52
KDM5B-207ENST00000472822 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
KDM5B-207ENST00000472822 TWISTNBQ3B726 338 aaPredicted RBP11.83□□□□□ -0.52
KDM5B-207ENST00000472822 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
KDM5B-207ENST00000472822 BTBD11A6QL63 1104 aa11.82□□□□□ -0.52
KDM5B-207ENST00000472822 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
KDM5B-207ENST00000472822 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
KDM5B-207ENST00000472822 DDB1Q16531 1140 aa11.82□□□□□ -0.52
KDM5B-207ENST00000472822 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
KDM5B-207ENST00000472822 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
KDM5B-207ENST00000472822 TCERG1O14776 1098 aaKnown RBP11.82□□□□□ -0.52
KDM5B-207ENST00000472822 HOXD11P31277 338 aaPredicted RBP11.82□□□□□ -0.52
KDM5B-207ENST00000472822 C20orf194Q5TEA3 1177 aa11.82□□□□□ -0.52
KDM5B-207ENST00000472822 QTRT2Q9H974 415 aaKnown RBP11.82□□□□□ -0.52
KDM5B-207ENST00000472822 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
KDM5B-207ENST00000472822 ITGB4P16144 1822 aa11.81□□□□□ -0.52
KDM5B-207ENST00000472822 CABP4P57796 275 aa11.81□□□□□ -0.52
KDM5B-207ENST00000472822 TNNQ9UQP3 1299 aa11.81□□□□□ -0.52
KDM5B-207ENST00000472822 FKBP8Q14318 412 aa11.8□□□□□ -0.52
KDM5B-207ENST00000472822 ZNF790Q6PG37 636 aa11.8□□□□□ -0.52
KDM5B-207ENST00000472822 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
KDM5B-207ENST00000472822 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
KDM5B-207ENST00000472822 PIGBQ92521 554 aa11.79□□□□□ -0.52
KDM5B-207ENST00000472822 RGS17Q9UGC6 210 aaPredicted RBP11.79□□□□□ -0.52
KDM5B-207ENST00000472822 PAPPAQ13219 1627 aa11.79□□□□□ -0.52
KDM5B-207ENST00000472822 BRPF1P55201 1214 aaPredicted RBP11.78□□□□□ -0.52
KDM5B-207ENST00000472822 ALDH1L2Q3SY69 923 aa11.78□□□□□ -0.52
KDM5B-207ENST00000472822 ZNF428Q96B54 188 aa11.78□□□□□ -0.52
KDM5B-207ENST00000472822 ZNF496Q96IT1 587 aaPredicted RBP11.78□□□□□ -0.52
KDM5B-207ENST00000472822 DOT1LQ8TEK3 1739 aa11.78□□□□□ -0.52
KDM5B-207ENST00000472822 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
KDM5B-207ENST00000472822 SMC4Q9NTJ3 1288 aa11.78□□□□□ -0.52
KDM5B-207ENST00000472822 UBR2Q8IWV8 1755 aa11.77□□□□□ -0.52
KDM5B-207ENST00000472822 KAT6BQ8WYB5 2073 aa11.77□□□□□ -0.52
KDM5B-207ENST00000472822 BCL9O00512 1426 aa11.77□□□□□ -0.52
KDM5B-207ENST00000472822 PRIM1P49642 420 aaKnown RBP11.77□□□□□ -0.53
KDM5B-207ENST00000472822 KCPQ6ZWJ8 1503 aa11.77□□□□□ -0.53
KDM5B-207ENST00000472822 C5P01031 1676 aa11.77□□□□□ -0.53
KDM5B-207ENST00000472822 RLBP1P12271 317 aa11.76□□□□□ -0.53
KDM5B-207ENST00000472822 FAM182BQ5T319 152 aa11.76□□□□□ -0.53
KDM5B-207ENST00000472822 PTF1AQ7RTS3 328 aa11.76□□□□□ -0.53
KDM5B-207ENST00000472822 SEPT12Q8IYM1 358 aa11.76□□□□□ -0.53
KDM5B-207ENST00000472822 ATG3Q9NT62 314 aa11.76□□□□□ -0.53
KDM5B-207ENST00000472822 ASAP1Q9ULH1 1129 aa11.76□□□□□ -0.53
KDM5B-207ENST00000472822 NOB1Q9ULX3 412 aaKnown RBP11.76□□□□□ -0.53
KDM5B-207ENST00000472822 KCNQ2O43526 872 aa11.75□□□□□ -0.53
KDM5B-207ENST00000472822 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
KDM5B-207ENST00000472822 G2E3Q7L622 706 aa11.75□□□□□ -0.53
KDM5B-207ENST00000472822 NECTIN2Q92692 538 aa11.75□□□□□ -0.53
KDM5B-207ENST00000472822 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
KDM5B-207ENST00000472822 ACSBG1Q96GR2 724 aa11.75□□□□□ -0.53
KDM5B-207ENST00000472822 TMOD3Q9NYL9 352 aa11.75□□□□□ -0.53
KDM5B-207ENST00000472822 SOS1Q07889 1333 aaPredicted RBP11.75□□□□□ -0.53
KDM5B-207ENST00000472822 BRWD3Q6RI45 1802 aa11.75□□□□□ -0.53
KDM5B-207ENST00000472822 HOXB7P09629 217 aa11.75□□□□□ -0.53
KDM5B-207ENST00000472822 ZNF772Q68DY9 489 aaPredicted RBP11.75□□□□□ -0.53
KDM5B-207ENST00000472822 PANK1Q8TE04 598 aa11.75□□□□□ -0.53
KDM5B-207ENST00000472822 TRIM27P14373 513 aa11.74□□□□□ -0.53
KDM5B-207ENST00000472822 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
KDM5B-207ENST00000472822 EXOC6Q8TAG9 804 aa11.74□□□□□ -0.53
KDM5B-207ENST00000472822 SLC4A9Q96Q91 983 aa11.74□□□□□ -0.53
KDM5B-207ENST00000472822 CRBNQ96SW2 442 aa11.74□□□□□ -0.53
KDM5B-207ENST00000472822 USP16Q9Y5T5 823 aa11.74□□□□□ -0.53
KDM5B-207ENST00000472822 RGS12O14924 1447 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 A0A0G2JS52 829 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 NEFLP07196 543 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 RBM6P78332 1123 aaKnown RBP11.73□□□□□ -0.53
KDM5B-207ENST00000472822 MYT1Q01538 1121 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 PDE3AQ14432 1141 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 PDIA6Q15084 440 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 ZKSCAN2Q63HK3 967 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 POTEAQ6S8J7 498 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
KDM5B-207ENST00000472822 PTCD1O75127 700 aaKnown RBP11.72□□□□□ -0.53
KDM5B-207ENST00000472822 ANXA1P04083 346 aa11.72□□□□□ -0.53
KDM5B-207ENST00000472822 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
KDM5B-207ENST00000472822 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms