RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 INSRP06213 1382 aa19.51■□□□□ 0.71
ABCF3-209ENST00000472608 KIAA1551Q9HCM1 1747 aa19.51■□□□□ 0.71
ABCF3-209ENST00000472608 SMG6Q86US8 1419 aaKnown RBP19.51■□□□□ 0.71
ABCF3-209ENST00000472608 LOC102724428A0A0B4J2F2 783 aa19.5■□□□□ 0.71
ABCF3-209ENST00000472608 PER1O15534 1290 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-209ENST00000472608 SIK1P57059 783 aa19.5■□□□□ 0.71
ABCF3-209ENST00000472608 ITGB4P16144 1822 aa19.5■□□□□ 0.71
ABCF3-209ENST00000472608 WDR90Q96KV7 1748 aa19.5■□□□□ 0.71
ABCF3-209ENST00000472608 KIF20BQ96Q89 1820 aa19.49■□□□□ 0.71
ABCF3-209ENST00000472608 MMP10P09238 476 aa19.49■□□□□ 0.71
ABCF3-209ENST00000472608 FSTL1Q12841 308 aa19.48■□□□□ 0.71
ABCF3-209ENST00000472608 KIF24Q5T7B8 1368 aa19.47■□□□□ 0.71
ABCF3-209ENST00000472608 ITPK1Q13572 414 aa19.47■□□□□ 0.71
ABCF3-209ENST00000472608 HSP90AB2PQ58FF8 381 aa19.47■□□□□ 0.71
ABCF3-209ENST00000472608 BCS1LQ9Y276 419 aa19.47■□□□□ 0.71
ABCF3-209ENST00000472608 C10orf71Q711Q0 1435 aa19.46■□□□□ 0.71
ABCF3-209ENST00000472608 A0A0G2JLW4 131 aa19.46■□□□□ 0.71
ABCF3-209ENST00000472608 NCAPD2Q15021 1401 aa19.45■□□□□ 0.7
ABCF3-209ENST00000472608 GNPATO15228 680 aa19.45■□□□□ 0.7
ABCF3-209ENST00000472608 PRELPP51888 382 aa19.45■□□□□ 0.7
ABCF3-209ENST00000472608 AMER1Q5JTC6 1135 aaPredicted RBP19.45■□□□□ 0.7
ABCF3-209ENST00000472608 ARHGAP27Q6ZUM4 889 aa19.45■□□□□ 0.7
ABCF3-209ENST00000472608 PKD1L3Q7Z443 1732 aa19.45■□□□□ 0.7
ABCF3-209ENST00000472608 HTRA3P83110 453 aa19.44■□□□□ 0.7
ABCF3-209ENST00000472608 NLGN1Q8N2Q7 840 aa19.44■□□□□ 0.7
ABCF3-209ENST00000472608 FLT4P35916 1363 aa19.44■□□□□ 0.7
ABCF3-209ENST00000472608 PLEKHG2Q9H7P9 1386 aa19.44■□□□□ 0.7
ABCF3-209ENST00000472608 NPC1L1Q9UHC9 1359 aa19.44■□□□□ 0.7
ABCF3-209ENST00000472608 N4BP2Q86UW6 1770 aaPredicted RBP19.42■□□□□ 0.7
ABCF3-209ENST00000472608 DPEP1P16444 411 aa19.42■□□□□ 0.7
ABCF3-209ENST00000472608 C9orf131Q5VYM1 1079 aa19.42■□□□□ 0.7
ABCF3-209ENST00000472608 TNS4Q8IZW8 715 aa19.42■□□□□ 0.7
ABCF3-209ENST00000472608 ASAP1Q9ULH1 1129 aa19.42■□□□□ 0.7
ABCF3-209ENST00000472608 FCHSD2O94868 740 aa19.41■□□□□ 0.7
ABCF3-209ENST00000472608 KCNA3P22001 575 aa19.41■□□□□ 0.7
ABCF3-209ENST00000472608 ATP6V1AP38606 617 aa19.41■□□□□ 0.7
ABCF3-209ENST00000472608 C16orf71Q8IYS4 520 aaPredicted RBP19.41■□□□□ 0.7
ABCF3-209ENST00000472608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.41■□□□□ 0.7
ABCF3-209ENST00000472608 ANKRD26Q9UPS8 1709 aa19.41■□□□□ 0.7
ABCF3-209ENST00000472608 BRCA1P38398 1863 aaKnown RBP19.4■□□□□ 0.7
ABCF3-209ENST00000472608 CCDC87Q9NVE4 849 aa19.4■□□□□ 0.7
ABCF3-209ENST00000472608 TMOD3Q9NYL9 352 aa19.4■□□□□ 0.7
ABCF3-209ENST00000472608 SPG7Q9UQ90 795 aa19.4■□□□□ 0.7
ABCF3-209ENST00000472608 TRAPPC3LQ5T215 181 aa19.39■□□□□ 0.69
ABCF3-209ENST00000472608 MORC1Q86VD1 984 aa19.39■□□□□ 0.69
ABCF3-209ENST00000472608 ATG3Q9NT62 314 aa19.39■□□□□ 0.69
ABCF3-209ENST00000472608 GYS1P13807 737 aa19.38■□□□□ 0.69
ABCF3-209ENST00000472608 ADRA2BP18089 450 aa19.38■□□□□ 0.69
ABCF3-209ENST00000472608 KDRP35968 1356 aa19.38■□□□□ 0.69
ABCF3-209ENST00000472608 RC3H1Q5TC82 1133 aaKnown RBP19.38■□□□□ 0.69
ABCF3-209ENST00000472608 KDM2BQ8NHM5 1336 aa19.38■□□□□ 0.69
ABCF3-209ENST00000472608 RTCBQ9Y3I0 505 aaKnown RBP19.38■□□□□ 0.69
ABCF3-209ENST00000472608 CAPN15O75808 1086 aa19.37■□□□□ 0.69
ABCF3-209ENST00000472608 ARHGEF1Q92888 912 aaKnown RBP19.37■□□□□ 0.69
ABCF3-209ENST00000472608 DCAF5Q96JK2 942 aa19.37■□□□□ 0.69
ABCF3-209ENST00000472608 POLKQ9UBT6 870 aa19.37■□□□□ 0.69
ABCF3-209ENST00000472608 ARFGEF1Q9Y6D6 1849 aa19.37■□□□□ 0.69
ABCF3-209ENST00000472608 C4AP0C0L4 1744 aa19.36■□□□□ 0.69
ABCF3-209ENST00000472608 KCPQ6ZWJ8 1503 aa19.35■□□□□ 0.69
ABCF3-209ENST00000472608 SLC4A9Q96Q91 983 aa19.35■□□□□ 0.69
ABCF3-209ENST00000472608 PIM2Q9P1W9 311 aa19.35■□□□□ 0.69
ABCF3-209ENST00000472608 ZNF831Q5JPB2 1677 aa19.34■□□□□ 0.69
ABCF3-209ENST00000472608 PHKG2P15735 406 aa19.34■□□□□ 0.69
ABCF3-209ENST00000472608 IFNL2Q8IZJ0 200 aa19.34■□□□□ 0.69
ABCF3-209ENST00000472608 SMC1BQ8NDV3 1235 aa19.34■□□□□ 0.69
ABCF3-209ENST00000472608 RRAGCQ9HB90 399 aa19.34■□□□□ 0.69
ABCF3-209ENST00000472608 EMILIN1Q9Y6C2 1016 aa19.34■□□□□ 0.69
ABCF3-209ENST00000472608 PARP3Q9Y6F1 533 aa19.34■□□□□ 0.69
ABCF3-209ENST00000472608 CNTNAP4Q9C0A0 1308 aa19.33■□□□□ 0.69
ABCF3-209ENST00000472608 RPS6KA4O75676 772 aa19.33■□□□□ 0.68
ABCF3-209ENST00000472608 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
ABCF3-209ENST00000472608 DALRD3Q5D0E6 543 aaKnown RBP19.32■□□□□ 0.68
ABCF3-209ENST00000472608 RNF181Q9P0P0 153 aa19.32■□□□□ 0.68
ABCF3-209ENST00000472608 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
ABCF3-209ENST00000472608 EYA1Q99502 592 aa19.31■□□□□ 0.68
ABCF3-209ENST00000472608 ZC3H4Q9UPT8 1303 aaKnown RBP19.3■□□□□ 0.68
ABCF3-209ENST00000472608 RFC4P35249 363 aa19.3■□□□□ 0.68
ABCF3-209ENST00000472608 TNRC6CQ9HCJ0 1690 aaKnown RBP19.3■□□□□ 0.68
ABCF3-209ENST00000472608 PPM1GO15355 546 aaPredicted RBP19.29■□□□□ 0.68
ABCF3-209ENST00000472608 HSPA1AP0DMV8 641 aaKnown RBP19.29■□□□□ 0.68
ABCF3-209ENST00000472608 HSPA1BP0DMV9 641 aaKnown RBP19.29■□□□□ 0.68
ABCF3-209ENST00000472608 ZNF316A6NFI3 1004 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-209ENST00000472608 ERVV-2B6SEH9 535 aa19.28■□□□□ 0.68
ABCF3-209ENST00000472608 DDX10Q13206 875 aaKnown RBP19.28■□□□□ 0.68
ABCF3-209ENST00000472608 SBF1O95248 1867 aa19.28■□□□□ 0.68
ABCF3-209ENST00000472608 COL5A3P25940 1745 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-209ENST00000472608 KDM6AO15550 1401 aaPredicted RBP19.27■□□□□ 0.68
ABCF3-209ENST00000472608 MYH14Q7Z406 1995 aaKnown RBP19.25■□□□□ 0.67
ABCF3-209ENST00000472608 DDR1Q08345 913 aa19.25■□□□□ 0.67
ABCF3-209ENST00000472608 RBM42Q9BTD8 480 aaKnown RBP19.25■□□□□ 0.67
ABCF3-209ENST00000472608 VEGFAP15692 232 aaPredicted RBP19.24■□□□□ 0.67
ABCF3-209ENST00000472608 MTHFSP49914 203 aa19.24■□□□□ 0.67
ABCF3-209ENST00000472608 FKBP8Q14318 412 aa19.24■□□□□ 0.67
ABCF3-209ENST00000472608 USP42Q9H9J4 1324 aaKnown RBP19.24■□□□□ 0.67
ABCF3-209ENST00000472608 GLTPD2A6NH11 291 aa19.23■□□□□ 0.67
ABCF3-209ENST00000472608 CHRNA5P30532 468 aa19.23■□□□□ 0.67
ABCF3-209ENST00000472608 TM4SF1P30408 202 aa19.22■□□□□ 0.67
ABCF3-209ENST00000472608 EIF4A2Q14240 407 aaKnown RBP19.22■□□□□ 0.67
ABCF3-209ENST00000472608 POLRMTO00411 1230 aaKnown RBP19.21■□□□□ 0.67
ABCF3-209ENST00000472608 HSP90AB1P08238 724 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms