RNA–Protein interactions for RNA: ENST00000470880.6

CHL1-211, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 3

Gene CHL1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-211ENST00000470880 TSPYL2Q9H2G4 693 aaPredicted RBP8.78□□□□□ -1
CHL1-211ENST00000470880 NFAT5O94916 1531 aa8.78□□□□□ -1
CHL1-211ENST00000470880 USP54Q70EL1 1684 aa8.78□□□□□ -1
CHL1-211ENST00000470880 MAP3K19Q56UN5 1328 aa8.78□□□□□ -1
CHL1-211ENST00000470880 MAP3K5Q99683 1374 aa8.77□□□□□ -1.01
CHL1-211ENST00000470880 CTCFP49711 727 aaPredicted RBP8.77□□□□□ -1.01
CHL1-211ENST00000470880 RALBP1Q15311 655 aa8.77□□□□□ -1.01
CHL1-211ENST00000470880 UNC5CLQ8IV45 518 aa8.77□□□□□ -1.01
CHL1-211ENST00000470880 USP35Q9P2H5 1018 aa8.77□□□□□ -1.01
CHL1-211ENST00000470880 EMILIN1Q9Y6C2 1016 aa8.77□□□□□ -1.01
CHL1-211ENST00000470880 ANKRD26Q9UPS8 1709 aa8.77□□□□□ -1.01
CHL1-211ENST00000470880 CRYBG1Q9Y4K1 1723 aa8.77□□□□□ -1.01
CHL1-211ENST00000470880 KIF24Q5T7B8 1368 aa8.76□□□□□ -1.01
CHL1-211ENST00000470880 ABCC6O95255 1503 aa8.76□□□□□ -1.01
CHL1-211ENST00000470880 PLCH1Q4KWH8 1693 aa8.76□□□□□ -1.01
CHL1-211ENST00000470880 HOXC9P31274 260 aa8.76□□□□□ -1.01
CHL1-211ENST00000470880 LBX1P52954 281 aa8.76□□□□□ -1.01
CHL1-211ENST00000470880 ANKRD24Q8TF21 1146 aa8.76□□□□□ -1.01
CHL1-211ENST00000470880 NLRP2Q9NX02 1062 aa8.76□□□□□ -1.01
CHL1-211ENST00000470880 SLIT2O94813 1529 aa8.75□□□□□ -1.01
CHL1-211ENST00000470880 MARF1Q9Y4F3 1742 aaKnown RBP8.75□□□□□ -1.01
CHL1-211ENST00000470880 APBA3O96018 575 aa8.75□□□□□ -1.01
CHL1-211ENST00000470880 YBX3P16989 372 aaKnown RBP eCLIP8.75□□□□□ -1.01
CHL1-211ENST00000470880 FBLN1P23142 703 aa8.75□□□□□ -1.01
CHL1-211ENST00000470880 PLA2G5P39877 138 aa8.75□□□□□ -1.01
CHL1-211ENST00000470880 RASEFQ8IZ41 740 aa8.75□□□□□ -1.01
CHL1-211ENST00000470880 IP6K1Q92551 441 aa8.75□□□□□ -1.01
CHL1-211ENST00000470880 COL5A2P05997 1499 aaPredicted RBP8.75□□□□□ -1.01
CHL1-211ENST00000470880 MEGF6O75095 1541 aa8.75□□□□□ -1.01
CHL1-211ENST00000470880 CRB1P82279 1406 aa8.74□□□□□ -1.01
CHL1-211ENST00000470880 GRIN3BO60391 1043 aa8.74□□□□□ -1.01
CHL1-211ENST00000470880 COL9A1P20849 921 aa8.74□□□□□ -1.01
CHL1-211ENST00000470880 MTHFSP49914 203 aa8.74□□□□□ -1.01
CHL1-211ENST00000470880 POLKQ9UBT6 870 aa8.74□□□□□ -1.01
CHL1-211ENST00000470880 NUDCQ9Y266 331 aa8.74□□□□□ -1.01
CHL1-211ENST00000470880 ERBB3P21860 1342 aa8.74□□□□□ -1.01
CHL1-211ENST00000470880 WDR17Q8IZU2 1322 aa8.74□□□□□ -1.01
CHL1-211ENST00000470880 MYBBP1AQ9BQG0 1328 aaKnown RBP8.74□□□□□ -1.01
CHL1-211ENST00000470880 INSRP06213 1382 aa8.73□□□□□ -1.01
CHL1-211ENST00000470880 ADAMTS7Q9UKP4 1686 aa8.73□□□□□ -1.01
CHL1-211ENST00000470880 CHRM1P11229 460 aaPredicted RBP8.73□□□□□ -1.01
CHL1-211ENST00000470880 PPP2R1AP30153 589 aa8.73□□□□□ -1.01
CHL1-211ENST00000470880 VPS72Q15906 364 aa8.73□□□□□ -1.01
CHL1-211ENST00000470880 HSP90AB2PQ58FF8 381 aa8.73□□□□□ -1.01
CHL1-211ENST00000470880 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
CHL1-211ENST00000470880 ARXQ96QS3 562 aa8.73□□□□□ -1.01
CHL1-211ENST00000470880 NWD2Q9ULI1 1742 aa8.73□□□□□ -1.01
CHL1-211ENST00000470880 LTN1O94822 1766 aa8.73□□□□□ -1.01
CHL1-211ENST00000470880 U2SURPO15042 1029 aaKnown RBP8.72□□□□□ -1.01
CHL1-211ENST00000470880 DIAPH1O60610 1272 aaKnown RBP8.72□□□□□ -1.01
CHL1-211ENST00000470880 NEFMP07197 916 aa8.72□□□□□ -1.01
CHL1-211ENST00000470880 DIEXFQ68CQ4 756 aaKnown RBP8.72□□□□□ -1.01
CHL1-211ENST00000470880 TCP11L2Q8N4U5 519 aa8.72□□□□□ -1.01
CHL1-211ENST00000470880 RBM46Q8TBY0 533 aaKnown RBP8.72□□□□□ -1.01
CHL1-211ENST00000470880 RAPGEF4Q8WZA2 1011 aa8.72□□□□□ -1.01
CHL1-211ENST00000470880 SGIP1Q9BQI5 828 aa8.72□□□□□ -1.01
CHL1-211ENST00000470880 PRKRIP1Q9H875 184 aaPredicted RBP8.72□□□□□ -1.01
CHL1-211ENST00000470880 AXIN2Q9Y2T1 843 aa8.72□□□□□ -1.01
CHL1-211ENST00000470880 LMO7Q8WWI1 1683 aa8.72□□□□□ -1.01
CHL1-211ENST00000470880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.71□□□□□ -1.02
CHL1-211ENST00000470880 EVX2Q03828 476 aa8.71□□□□□ -1.02
CHL1-211ENST00000470880 WDR43Q15061 677 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHL1-211ENST00000470880 FAM98CQ17RN3 349 aaKnown RBP8.71□□□□□ -1.02
CHL1-211ENST00000470880 ZFP91Q96JP5 570 aaPredicted RBP8.71□□□□□ -1.02
CHL1-211ENST00000470880 BCL11BQ9C0K0 894 aaPredicted RBP8.71□□□□□ -1.02
CHL1-211ENST00000470880 PRDM6Q9NQX0 595 aa8.71□□□□□ -1.02
CHL1-211ENST00000470880 RAPGEFL1Q9UHV5 662 aa8.71□□□□□ -1.02
CHL1-211ENST00000470880 THRAP3Q9Y2W1 955 aaKnown RBP8.71□□□□□ -1.02
CHL1-211ENST00000470880 STK24Q9Y6E0 443 aa8.71□□□□□ -1.02
CHL1-211ENST00000470880 COL6A3P12111 3177 aa8.71□□□□□ -1.02
CHL1-211ENST00000470880 TRIM37O94972 964 aa8.7□□□□□ -1.02
CHL1-211ENST00000470880 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
CHL1-211ENST00000470880 EIF4A2Q14240 407 aaKnown RBP8.7□□□□□ -1.02
CHL1-211ENST00000470880 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
CHL1-211ENST00000470880 FAM122AQ96E09 287 aa8.7□□□□□ -1.02
CHL1-211ENST00000470880 CDCA7Q9BWT1 371 aaPredicted RBP8.7□□□□□ -1.02
CHL1-211ENST00000470880 CARD10Q9BWT7 1032 aa8.7□□□□□ -1.02
CHL1-211ENST00000470880 NRAPQ86VF7 1730 aa8.7□□□□□ -1.02
CHL1-211ENST00000470880 SPATA31A1Q5TZJ5 1347 aa8.7□□□□□ -1.02
CHL1-211ENST00000470880 SPATA31A5Q5VU36 1347 aa8.7□□□□□ -1.02
CHL1-211ENST00000470880 SPATA31A7Q8IWB4 1347 aa8.7□□□□□ -1.02
CHL1-211ENST00000470880 FAM208AQ9UK61 1670 aaKnown RBP8.69□□□□□ -1.02
CHL1-211ENST00000470880 TULP1O00294 542 aaPredicted RBP8.69□□□□□ -1.02
CHL1-211ENST00000470880 ONECUT3O60422 494 aaPredicted RBP8.69□□□□□ -1.02
CHL1-211ENST00000470880 IL2RBP14784 551 aa8.69□□□□□ -1.02
CHL1-211ENST00000470880 FSTL1Q12841 308 aa8.69□□□□□ -1.02
CHL1-211ENST00000470880 PDE3BQ13370 1112 aa8.69□□□□□ -1.02
CHL1-211ENST00000470880 ZNF579Q8NAF0 562 aaKnown RBP8.69□□□□□ -1.02
CHL1-211ENST00000470880 SP7Q8TDD2 431 aaPredicted RBP8.69□□□□□ -1.02
CHL1-211ENST00000470880 AIDAQ96BJ3 306 aa8.69□□□□□ -1.02
CHL1-211ENST00000470880 COL25A1Q9BXS0 654 aaPredicted RBP8.69□□□□□ -1.02
CHL1-211ENST00000470880 SZT2Q5T011 3432 aa8.69□□□□□ -1.02
CHL1-211ENST00000470880 PEAK1Q9H792 1746 aa8.68□□□□□ -1.02
CHL1-211ENST00000470880 U2AF1L5P0DN76 240 aaPredicted RBP8.68□□□□□ -1.02
CHL1-211ENST00000470880 U2AF1Q01081 240 aaKnown RBP eCLIP8.68□□□□□ -1.02
CHL1-211ENST00000470880 DDB1Q16531 1140 aa8.68□□□□□ -1.02
CHL1-211ENST00000470880 MRS2Q9HD23 443 aa8.68□□□□□ -1.02
CHL1-211ENST00000470880 RYDENQ9NUL5 291 aaKnown RBP8.68□□□□□ -1.02
CHL1-211ENST00000470880 NBPF6Q5VWK0 638 aa8.67□□□□□ -1.02
CHL1-211ENST00000470880 SULT6B1Q6IMI4 303 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms