RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 CCDC125Q86Z20 511 aa5.84□□□□□ -1.47
UBXN4-206ENST00000470687 GOLGA6L1Q8N7Z2 621 aa5.84□□□□□ -1.47
UBXN4-206ENST00000470687 GPAMQ9HCL2 828 aa5.84□□□□□ -1.47
UBXN4-206ENST00000470687 PHF24Q9UPV7 400 aa5.84□□□□□ -1.47
UBXN4-206ENST00000470687 PCDHB9Q9Y5E1 797 aa5.84□□□□□ -1.47
UBXN4-206ENST00000470687 C1QTNF9BB2RNN3 333 aa5.83□□□□□ -1.48
UBXN4-206ENST00000470687 SCTRP47872 440 aa5.83□□□□□ -1.48
UBXN4-206ENST00000470687 UBAP2LQ14157 1087 aaKnown RBP5.83□□□□□ -1.48
UBXN4-206ENST00000470687 TRIM34Q9BYJ4 488 aa5.83□□□□□ -1.48
UBXN4-206ENST00000470687 ARHGEF10LQ9HCE6 1279 aa5.83□□□□□ -1.48
UBXN4-206ENST00000470687 ZBBXA8MT70 800 aa5.82□□□□□ -1.48
UBXN4-206ENST00000470687 GNB5O14775 395 aa5.82□□□□□ -1.48
UBXN4-206ENST00000470687 TRAK2O60296 914 aa5.82□□□□□ -1.48
UBXN4-206ENST00000470687 SLCO4C1Q6ZQN7 724 aa5.82□□□□□ -1.48
UBXN4-206ENST00000470687 CD163Q86VB7 1156 aa5.82□□□□□ -1.48
UBXN4-206ENST00000470687 OSBPL3Q9H4L5 887 aa5.82□□□□□ -1.48
UBXN4-206ENST00000470687 A0A1B0GTH6 734 aa5.81□□□□□ -1.48
UBXN4-206ENST00000470687 FBXO45P0C2W1 286 aa5.81□□□□□ -1.48
UBXN4-206ENST00000470687 AMPD1P23109 780 aa5.81□□□□□ -1.48
UBXN4-206ENST00000470687 CHRNA4P43681 627 aa5.81□□□□□ -1.48
UBXN4-206ENST00000470687 TMEM132AQ24JP5 1023 aa5.81□□□□□ -1.48
UBXN4-206ENST00000470687 ATP1B4Q9UN42 357 aaPredicted RBP5.81□□□□□ -1.48
UBXN4-206ENST00000470687 PIK3R2O00459 728 aa5.8□□□□□ -1.48
UBXN4-206ENST00000470687 C2CD2LO14523 706 aa5.8□□□□□ -1.48
UBXN4-206ENST00000470687 BMP4P12644 408 aa5.8□□□□□ -1.48
UBXN4-206ENST00000470687 LBRQ14739 615 aaKnown RBP5.8□□□□□ -1.48
UBXN4-206ENST00000470687 RNF20Q5VTR2 975 aa5.8□□□□□ -1.48
UBXN4-206ENST00000470687 RAB6BQ9NRW1 208 aa5.8□□□□□ -1.48
UBXN4-206ENST00000470687 GGA1Q9UJY5 639 aa5.8□□□□□ -1.48
UBXN4-206ENST00000470687 ATXN7L1Q9ULK2 861 aaPredicted RBP5.8□□□□□ -1.48
UBXN4-206ENST00000470687 IL2RAP01589 272 aa5.79□□□□□ -1.48
UBXN4-206ENST00000470687 RFC5P40937 340 aa5.79□□□□□ -1.48
UBXN4-206ENST00000470687 PHKA2P46019 1235 aa5.79□□□□□ -1.48
UBXN4-206ENST00000470687 DGKGP49619 791 aa5.79□□□□□ -1.48
UBXN4-206ENST00000470687 KRTAP1-3Q8IUG1 177 aa5.79□□□□□ -1.48
UBXN4-206ENST00000470687 CNKSR1Q969H4 720 aa5.79□□□□□ -1.48
UBXN4-206ENST00000470687 ESYT1Q9BSJ8 1104 aa5.79□□□□□ -1.48
UBXN4-206ENST00000470687 PCDHB11Q9Y5F2 797 aa5.79□□□□□ -1.48
UBXN4-206ENST00000470687 EPXP11678 715 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 FGFR3P22607 806 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 CENPCQ03188 943 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 ABHD17AQ96GS6 310 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 DDRGK1Q96HY6 314 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 BTBD6Q96KE9 485 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 SEMA6BQ9H3T3 888 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 RUBCNLQ9H714 662 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 NDFIP2Q9NV92 336 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 NOP53Q9NZM5 478 aaKnown RBP5.78□□□□□ -1.48
UBXN4-206ENST00000470687 HRH3Q9Y5N1 445 aa5.78□□□□□ -1.48
UBXN4-206ENST00000470687 GNRH1P01148 92 aa5.77□□□□□ -1.49
UBXN4-206ENST00000470687 CSB-PGBD3P0DP91 1061 aa5.77□□□□□ -1.49
UBXN4-206ENST00000470687 CTBSQ01459 385 aa5.77□□□□□ -1.49
UBXN4-206ENST00000470687 DOC2BQ14184 412 aa5.77□□□□□ -1.49
UBXN4-206ENST00000470687 ZMYM1Q5SVZ6 1142 aa5.77□□□□□ -1.49
UBXN4-206ENST00000470687 PGBD3Q8N328 593 aa5.77□□□□□ -1.49
UBXN4-206ENST00000470687 ZSCAN10Q96SZ4 725 aaPredicted RBP5.77□□□□□ -1.49
UBXN4-206ENST00000470687 BNIP3LO60238 219 aa5.76□□□□□ -1.49
UBXN4-206ENST00000470687 ARAFP10398 606 aa5.76□□□□□ -1.49
UBXN4-206ENST00000470687 MSX1P28360 303 aa5.76□□□□□ -1.49
UBXN4-206ENST00000470687 C4orf17Q53FE4 359 aa5.76□□□□□ -1.49
UBXN4-206ENST00000470687 EFHC2Q5JST6 749 aa5.76□□□□□ -1.49
UBXN4-206ENST00000470687 RNF135Q8IUD6 432 aa5.76□□□□□ -1.49
UBXN4-206ENST00000470687 FHDC1Q9C0D6 1143 aaPredicted RBP5.76□□□□□ -1.49
UBXN4-206ENST00000470687 GPR37L1O60883 481 aa5.75□□□□□ -1.49
UBXN4-206ENST00000470687 MCCD1P59942 119 aaPredicted RBP5.75□□□□□ -1.49
UBXN4-206ENST00000470687 GNASQ5JWF2 1037 aa5.75□□□□□ -1.49
UBXN4-206ENST00000470687 GJD4Q96KN9 370 aaPredicted RBP5.75□□□□□ -1.49
UBXN4-206ENST00000470687 ESF1Q9H501 851 aaKnown RBP5.75□□□□□ -1.49
UBXN4-206ENST00000470687 NEURL1BA8MQ27 555 aa5.74□□□□□ -1.49
UBXN4-206ENST00000470687 TMEM214Q6NUQ4 689 aaKnown RBP5.74□□□□□ -1.49
UBXN4-206ENST00000470687 CHSY3Q70JA7 882 aa5.74□□□□□ -1.49
UBXN4-206ENST00000470687 XAGE2Q96GT9 111 aa5.74□□□□□ -1.49
UBXN4-206ENST00000470687 CRISPLD1Q9H336 500 aa5.74□□□□□ -1.49
UBXN4-206ENST00000470687 GOPCQ9HD26 462 aa5.74□□□□□ -1.49
UBXN4-206ENST00000470687 GTF2E1P29083 439 aaPredicted RBP5.73□□□□□ -1.49
UBXN4-206ENST00000470687 NR1H3Q13133 447 aa5.73□□□□□ -1.49
UBXN4-206ENST00000470687 ZNF592Q92610 1267 aa5.73□□□□□ -1.49
UBXN4-206ENST00000470687 KRTAP4-12Q9BQ66 201 aa5.73□□□□□ -1.49
UBXN4-206ENST00000470687 GATA4P43694 442 aa5.72□□□□□ -1.49
UBXN4-206ENST00000470687 FOXD4L6Q3SYB3 417 aaPredicted RBP5.72□□□□□ -1.49
UBXN4-206ENST00000470687 FOXD4L3Q6VB84 417 aaPredicted RBP5.72□□□□□ -1.49
UBXN4-206ENST00000470687 DNAAF2Q9NVR5 837 aaKnown RBP5.72□□□□□ -1.49
UBXN4-206ENST00000470687 MYCP01106 439 aaPredicted RBP5.71□□□□□ -1.5
UBXN4-206ENST00000470687 RSPO4Q2I0M5 234 aaPredicted RBP5.71□□□□□ -1.5
UBXN4-206ENST00000470687 TMEM259Q4ZIN3 620 aa5.71□□□□□ -1.5
UBXN4-206ENST00000470687 LCE3BQ5TA77 95 aa5.71□□□□□ -1.5
UBXN4-206ENST00000470687 FIGNL1Q6PIW4 674 aa5.71□□□□□ -1.5
UBXN4-206ENST00000470687 RHBDD1Q8TEB9 315 aa5.71□□□□□ -1.5
UBXN4-206ENST00000470687 TRIM11Q96F44 468 aa5.71□□□□□ -1.5
UBXN4-206ENST00000470687 CDCA7Q9BWT1 371 aaPredicted RBP5.71□□□□□ -1.5
UBXN4-206ENST00000470687 KLF15Q9UIH9 416 aa5.71□□□□□ -1.5
UBXN4-206ENST00000470687 TIMELESSQ9UNS1 1208 aa5.71□□□□□ -1.5
UBXN4-206ENST00000470687 SCO2A0A1W2PP80 73 aa5.7□□□□□ -1.5
UBXN4-206ENST00000470687 SPATA31C1P0DKV0 1188 aa5.7□□□□□ -1.5
UBXN4-206ENST00000470687 ADH6P28332 368 aa5.7□□□□□ -1.5
UBXN4-206ENST00000470687 FCHSD1Q86WN1 690 aa5.7□□□□□ -1.5
UBXN4-206ENST00000470687 PPARGC1BQ86YN6 1023 aaKnown RBP5.7□□□□□ -1.5
UBXN4-206ENST00000470687 CCDC85AQ96PX6 553 aaPredicted RBP5.7□□□□□ -1.5
UBXN4-206ENST00000470687 ZCCHC2Q9C0B9 1178 aaKnown RBP5.7□□□□□ -1.5
UBXN4-206ENST00000470687 HCN2Q9UL51 889 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms