RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 ZCRB1Q8TBF4 217 aaKnown RBP10.71□□□□□ -0.69
GTF3A-206ENST00000470606 ZNF428Q96B54 188 aa10.71□□□□□ -0.69
GTF3A-206ENST00000470606 COG6Q9Y2V7 657 aa10.71□□□□□ -0.69
GTF3A-206ENST00000470606 TOGARAM1Q9Y4F4 1720 aa10.71□□□□□ -0.7
GTF3A-206ENST00000470606 MRC1P22897 1456 aa10.71□□□□□ -0.7
GTF3A-206ENST00000470606 EIF4A1P60842 406 aaKnown RBP10.7□□□□□ -0.7
GTF3A-206ENST00000470606 NFATC2IPQ8NCF5 419 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 BABAM1Q9NWV8 329 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 BCL9LQ86UU0 1499 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 HEG1Q9ULI3 1381 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 BTBD11A6QL63 1104 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 RGS12O14924 1447 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 TEFQ10587 303 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 ZKSCAN2Q63HK3 967 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 ATF7IPQ6VMQ6 1270 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 SLC52A2Q9HAB3 445 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 KAT6BQ8WYB5 2073 aa10.7□□□□□ -0.7
GTF3A-206ENST00000470606 SPATA31A1Q5TZJ5 1347 aa10.69□□□□□ -0.7
GTF3A-206ENST00000470606 PRAMEF22A3QJZ6 481 aa10.69□□□□□ -0.7
GTF3A-206ENST00000470606 SLC39A6Q13433 755 aa10.69□□□□□ -0.7
GTF3A-206ENST00000470606 DCAF5Q96JK2 942 aa10.69□□□□□ -0.7
GTF3A-206ENST00000470606 PCDH11XQ9BZA7 1347 aa10.69□□□□□ -0.7
GTF3A-206ENST00000470606 PCDH11YQ9BZA8 1340 aa10.69□□□□□ -0.7
GTF3A-206ENST00000470606 CACNA1FO60840 1977 aa10.69□□□□□ -0.7
GTF3A-206ENST00000470606 CANXP27824 592 aaKnown RBP10.68□□□□□ -0.7
GTF3A-206ENST00000470606 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
GTF3A-206ENST00000470606 G2E3Q7L622 706 aa10.68□□□□□ -0.7
GTF3A-206ENST00000470606 DDX54Q8TDD1 881 aaKnown RBP10.68□□□□□ -0.7
GTF3A-206ENST00000470606 GLI3P10071 1580 aa10.68□□□□□ -0.7
GTF3A-206ENST00000470606 DZIP1LQ8IYY4 767 aaKnown RBP10.68□□□□□ -0.7
GTF3A-206ENST00000470606 NECTIN2Q92692 538 aa10.68□□□□□ -0.7
GTF3A-206ENST00000470606 C8orf37Q96NL8 207 aa10.68□□□□□ -0.7
GTF3A-206ENST00000470606 SPATA31A5Q5VU36 1347 aa10.68□□□□□ -0.7
GTF3A-206ENST00000470606 SPATA31A7Q8IWB4 1347 aa10.68□□□□□ -0.7
GTF3A-206ENST00000470606 KIF16BQ96L93 1317 aa10.68□□□□□ -0.7
GTF3A-206ENST00000470606 C5P01031 1676 aa10.67□□□□□ -0.7
GTF3A-206ENST00000470606 TMEM57Q8N5G2 664 aa10.67□□□□□ -0.7
GTF3A-206ENST00000470606 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
GTF3A-206ENST00000470606 ITGB4P16144 1822 aa10.67□□□□□ -0.7
GTF3A-206ENST00000470606 SLC4A2P04920 1241 aa10.66□□□□□ -0.7
GTF3A-206ENST00000470606 EP400Q96L91 3159 aa10.66□□□□□ -0.7
GTF3A-206ENST00000470606 GIGYF1O75420 1035 aaPredicted RBP10.66□□□□□ -0.7
GTF3A-206ENST00000470606 MVPQ14764 893 aaKnown RBP10.66□□□□□ -0.7
GTF3A-206ENST00000470606 ZNF790Q6PG37 636 aa10.66□□□□□ -0.7
GTF3A-206ENST00000470606 FNBP4Q8N3X1 1017 aaPredicted RBP10.66□□□□□ -0.7
GTF3A-206ENST00000470606 ARHGAP45Q92619 1136 aa10.66□□□□□ -0.7
GTF3A-206ENST00000470606 ABCC4O15439 1325 aa10.66□□□□□ -0.7
GTF3A-206ENST00000470606 SPATA31A6Q5VVP1 1343 aa10.66□□□□□ -0.7
GTF3A-206ENST00000470606 UNC5CLQ8IV45 518 aa10.65□□□□□ -0.7
GTF3A-206ENST00000470606 ZNF496Q96IT1 587 aaPredicted RBP10.65□□□□□ -0.7
GTF3A-206ENST00000470606 NGLY1Q96IV0 654 aa10.65□□□□□ -0.7
GTF3A-206ENST00000470606 UBR2Q8IWV8 1755 aa10.65□□□□□ -0.7
GTF3A-206ENST00000470606 PCDHB15Q9Y5E8 787 aa10.64□□□□□ -0.71
GTF3A-206ENST00000470606 PAPPAQ13219 1627 aa10.64□□□□□ -0.71
GTF3A-206ENST00000470606 IPO8O15397 1037 aaKnown RBP10.64□□□□□ -0.71
GTF3A-206ENST00000470606 ANXA1P04083 346 aa10.64□□□□□ -0.71
GTF3A-206ENST00000470606 HSP90AB1P08238 724 aaKnown RBP10.64□□□□□ -0.71
GTF3A-206ENST00000470606 FTSJ3Q8IY81 847 aaKnown RBP10.64□□□□□ -0.71
GTF3A-206ENST00000470606 TNS2Q63HR2 1409 aa10.63□□□□□ -0.71
GTF3A-206ENST00000470606 KDM2BQ8NHM5 1336 aa10.63□□□□□ -0.71
GTF3A-206ENST00000470606 ERVV-2B6SEH9 535 aa10.63□□□□□ -0.71
GTF3A-206ENST00000470606 EIF2S2P20042 333 aaKnown RBP10.63□□□□□ -0.71
GTF3A-206ENST00000470606 CABP4P57796 275 aa10.63□□□□□ -0.71
GTF3A-206ENST00000470606 PROSER3Q2NL68 480 aa10.63□□□□□ -0.71
GTF3A-206ENST00000470606 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
GTF3A-206ENST00000470606 SKAP1Q86WV1 359 aa10.63□□□□□ -0.71
GTF3A-206ENST00000470606 PHAXQ9H814 394 aaKnown RBP10.63□□□□□ -0.71
GTF3A-206ENST00000470606 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.63□□□□□ -0.71
GTF3A-206ENST00000470606 KCPQ6ZWJ8 1503 aa10.63□□□□□ -0.71
GTF3A-206ENST00000470606 SOS1Q07889 1333 aaPredicted RBP10.62□□□□□ -0.71
GTF3A-206ENST00000470606 F6X3S4 739 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 IGHDP01880 384 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 VPS72Q15906 364 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 CCDC30Q5VVM6 783 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 ITPRIPQ8IWB1 547 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 CHPF2Q9P2E5 772 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 THRAP3Q9Y2W1 955 aaKnown RBP10.62□□□□□ -0.71
GTF3A-206ENST00000470606 EXOC5O00471 708 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
GTF3A-206ENST00000470606 HOXB7P09629 217 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 PDIA6Q15084 440 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 MARCH10Q8NA82 808 aaPredicted RBP10.62□□□□□ -0.71
GTF3A-206ENST00000470606 PIGBQ92521 554 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 ZBTB40Q9NUA8 1239 aa10.62□□□□□ -0.71
GTF3A-206ENST00000470606 FLIIQ13045 1269 aa10.61□□□□□ -0.71
GTF3A-206ENST00000470606 FAM98CQ17RN3 349 aaKnown RBP10.61□□□□□ -0.71
GTF3A-206ENST00000470606 USP21Q9UK80 565 aa10.61□□□□□ -0.71
GTF3A-206ENST00000470606 CCDC9Q9Y3X0 531 aaKnown RBP10.61□□□□□ -0.71
GTF3A-206ENST00000470606 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
GTF3A-206ENST00000470606 DOT1LQ8TEK3 1739 aa10.61□□□□□ -0.71
GTF3A-206ENST00000470606 PTPRCP08575 1304 aa10.61□□□□□ -0.71
GTF3A-206ENST00000470606 API5Q9BZZ5 524 aaKnown RBP10.6□□□□□ -0.71
GTF3A-206ENST00000470606 ASAP1Q9ULH1 1129 aa10.6□□□□□ -0.71
GTF3A-206ENST00000470606 DDB1Q16531 1140 aa10.6□□□□□ -0.71
GTF3A-206ENST00000470606 INTS3Q68E01 1043 aaKnown RBP10.6□□□□□ -0.71
GTF3A-206ENST00000470606 LRP10Q7Z4F1 713 aa10.6□□□□□ -0.71
GTF3A-206ENST00000470606 STK31Q9BXU1 1019 aa10.6□□□□□ -0.71
GTF3A-206ENST00000470606 DDX19BQ9UMR2 479 aa10.6□□□□□ -0.71
GTF3A-206ENST00000470606 MS4A1P11836 297 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms