RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 EP400Q96L91 3159 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 RTL1A6NKG5 1358 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 WDR17Q8IZU2 1322 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 POM121Q96HA1 1249 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 THRAP3Q9Y2W1 955 aaKnown RBP9.6□□□□□ -0.87
MSL3-210ENST00000468149 LARP1Q6PKG0 1096 aaKnown RBP9.59□□□□□ -0.87
MSL3-210ENST00000468149 SBF2Q86WG5 1849 aa9.58□□□□□ -0.88
MSL3-210ENST00000468149 ERBB3P21860 1342 aa9.58□□□□□ -0.88
MSL3-210ENST00000468149 MAP3K19Q56UN5 1328 aa9.58□□□□□ -0.88
MSL3-210ENST00000468149 PPM1GO15355 546 aaPredicted RBP9.58□□□□□ -0.88
MSL3-210ENST00000468149 MLLT3P42568 568 aaPredicted RBP9.58□□□□□ -0.88
MSL3-210ENST00000468149 CCDC27Q2M243 656 aa9.58□□□□□ -0.88
MSL3-210ENST00000468149 KNSTRNQ9Y448 316 aa9.58□□□□□ -0.88
MSL3-210ENST00000468149 LRRC37A3O60309 1634 aa9.58□□□□□ -0.88
MSL3-210ENST00000468149 PER1O15534 1290 aaPredicted RBP9.57□□□□□ -0.88
MSL3-210ENST00000468149 PARP9Q8IXQ6 854 aa9.57□□□□□ -0.88
MSL3-210ENST00000468149 TCP11L2Q8N4U5 519 aa9.57□□□□□ -0.88
MSL3-210ENST00000468149 IP6K1Q92551 441 aa9.57□□□□□ -0.88
MSL3-210ENST00000468149 KAT6BQ8WYB5 2073 aa9.57□□□□□ -0.88
MSL3-210ENST00000468149 BRD1O95696 1058 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 MNX1P50219 401 aaPredicted RBP9.56□□□□□ -0.88
MSL3-210ENST00000468149 AMHR2Q16671 573 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 FAM98CQ17RN3 349 aaKnown RBP9.56□□□□□ -0.88
MSL3-210ENST00000468149 TOM1L2Q6ZVM7 507 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 SEPT12Q8IYM1 358 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 FLT4P35916 1363 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 NPC1L1Q9UHC9 1359 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 FBLN1P23142 703 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 HOXC9P31274 260 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 AMPHP49418 695 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 CARD10Q9BWT7 1032 aa9.56□□□□□ -0.88
MSL3-210ENST00000468149 CSB-PGBD3P0DP91 1061 aa9.55□□□□□ -0.88
MSL3-210ENST00000468149 RRS1Q15050 365 aaKnown RBP9.55□□□□□ -0.88
MSL3-210ENST00000468149 MFRPQ9BY79 579 aa9.55□□□□□ -0.88
MSL3-210ENST00000468149 IGSF5Q9NSI5 407 aa9.55□□□□□ -0.88
MSL3-210ENST00000468149 INSRP06213 1382 aa9.55□□□□□ -0.88
MSL3-210ENST00000468149 KRT27Q7Z3Y8 459 aa9.54□□□□□ -0.88
MSL3-210ENST00000468149 ANKRD24Q8TF21 1146 aa9.54□□□□□ -0.88
MSL3-210ENST00000468149 CDCA7Q9BWT1 371 aaPredicted RBP9.54□□□□□ -0.88
MSL3-210ENST00000468149 SMG6Q86US8 1419 aaKnown RBP9.54□□□□□ -0.88
MSL3-210ENST00000468149 SHANK3Q9BYB0 1731 aa9.54□□□□□ -0.88
MSL3-210ENST00000468149 DISP2A7MBM2 1401 aa9.53□□□□□ -0.88
MSL3-210ENST00000468149 A0A0G2JS52 829 aa9.53□□□□□ -0.88
MSL3-210ENST00000468149 UBE2Q2Q8WVN8 375 aa9.53□□□□□ -0.88
MSL3-210ENST00000468149 TNS1Q9HBL0 1735 aaKnown RBP9.53□□□□□ -0.88
MSL3-210ENST00000468149 CANXP27824 592 aaKnown RBP9.53□□□□□ -0.88
MSL3-210ENST00000468149 POLKQ9UBT6 870 aa9.53□□□□□ -0.88
MSL3-210ENST00000468149 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
MSL3-210ENST00000468149 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
MSL3-210ENST00000468149 MORC1Q86VD1 984 aa9.52□□□□□ -0.89
MSL3-210ENST00000468149 UPF1Q92900 1129 aaKnown RBP eCLIP9.52□□□□□ -0.89
MSL3-210ENST00000468149 NLRP2Q9NX02 1062 aa9.52□□□□□ -0.89
MSL3-210ENST00000468149 PKD1L3Q7Z443 1732 aa9.51□□□□□ -0.89
MSL3-210ENST00000468149 UNCXA6NJT0 531 aa9.51□□□□□ -0.89
MSL3-210ENST00000468149 PPP1R37O75864 691 aa9.51□□□□□ -0.89
MSL3-210ENST00000468149 BCL11AQ9H165 835 aa9.51□□□□□ -0.89
MSL3-210ENST00000468149 VIRMAQ69YN4 1812 aaKnown RBP9.51□□□□□ -0.89
MSL3-210ENST00000468149 RGPD3A6NKT7 1758 aaPredicted RBP9.5□□□□□ -0.89
MSL3-210ENST00000468149 RGPD4Q7Z3J3 1758 aa9.5□□□□□ -0.89
MSL3-210ENST00000468149 PYGBP11216 843 aa9.5□□□□□ -0.89
MSL3-210ENST00000468149 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
MSL3-210ENST00000468149 DDB1Q16531 1140 aa9.5□□□□□ -0.89
MSL3-210ENST00000468149 CCDC102AQ96A19 550 aa9.5□□□□□ -0.89
MSL3-210ENST00000468149 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
MSL3-210ENST00000468149 NCAPD2Q15021 1401 aa9.5□□□□□ -0.89
MSL3-210ENST00000468149 TNS2Q63HR2 1409 aa9.5□□□□□ -0.89
MSL3-210ENST00000468149 GPR37O15354 613 aa9.49□□□□□ -0.89
MSL3-210ENST00000468149 IL2RBP14784 551 aa9.49□□□□□ -0.89
MSL3-210ENST00000468149 TNNT2P45379 298 aaPredicted RBP9.49□□□□□ -0.89
MSL3-210ENST00000468149 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
MSL3-210ENST00000468149 LTV1Q96GA3 475 aaPredicted RBP9.49□□□□□ -0.89
MSL3-210ENST00000468149 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
MSL3-210ENST00000468149 OVOS2A0A0G2JMS6 1433 aa9.49□□□□□ -0.89
MSL3-210ENST00000468149 BCL9O00512 1426 aa9.49□□□□□ -0.89
MSL3-210ENST00000468149 MFSD10Q14728 455 aa9.49□□□□□ -0.89
MSL3-210ENST00000468149 CC2D1BQ5T0F9 858 aaKnown RBP9.49□□□□□ -0.89
MSL3-210ENST00000468149 CHRDL2Q6WN34 429 aa9.49□□□□□ -0.89
MSL3-210ENST00000468149 FAM196AQ6ZSG2 479 aa9.49□□□□□ -0.89
MSL3-210ENST00000468149 PLEKHG2Q9H7P9 1386 aa9.48□□□□□ -0.89
MSL3-210ENST00000468149 NHSQ6T4R5 1651 aa9.48□□□□□ -0.89
MSL3-210ENST00000468149 EXOC5O00471 708 aa9.48□□□□□ -0.89
MSL3-210ENST00000468149 NBPF6Q5VWK0 638 aa9.48□□□□□ -0.89
MSL3-210ENST00000468149 SND1Q7KZF4 910 aaKnown RBP eCLIP9.48□□□□□ -0.89
MSL3-210ENST00000468149 NBPF4Q96M43 638 aa9.48□□□□□ -0.89
MSL3-210ENST00000468149 CWC22Q9HCG8 908 aaKnown RBP9.48□□□□□ -0.89
MSL3-210ENST00000468149 COG6Q9Y2V7 657 aa9.48□□□□□ -0.89
MSL3-210ENST00000468149 ITGB4P16144 1822 aa9.47□□□□□ -0.89
MSL3-210ENST00000468149 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
MSL3-210ENST00000468149 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
MSL3-210ENST00000468149 DOT1LQ8TEK3 1739 aa9.47□□□□□ -0.89
MSL3-210ENST00000468149 MEGF6O75095 1541 aa9.47□□□□□ -0.89
MSL3-210ENST00000468149 CAMK2BQ13554 666 aa9.46□□□□□ -0.89
MSL3-210ENST00000468149 BTAF1O14981 1849 aa9.46□□□□□ -0.89
MSL3-210ENST00000468149 IRF6O14896 467 aa9.45□□□□□ -0.9
MSL3-210ENST00000468149 PRKAR2AP13861 404 aaKnown RBP9.45□□□□□ -0.9
MSL3-210ENST00000468149 PDE4AP27815 886 aa9.45□□□□□ -0.9
MSL3-210ENST00000468149 MTHFSP49914 203 aa9.45□□□□□ -0.9
MSL3-210ENST00000468149 EIF4A2Q14240 407 aaKnown RBP9.45□□□□□ -0.9
MSL3-210ENST00000468149 FAM182BQ5T319 152 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 282.8 ms