RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 ADAMTS7Q9UKP4 1686 aa11.37□□□□□ -0.59
TMEM254-209ENST00000467529 EIF4A1P60842 406 aaKnown RBP11.36□□□□□ -0.59
TMEM254-209ENST00000467529 STK31Q9BXU1 1019 aa11.36□□□□□ -0.59
TMEM254-209ENST00000467529 SIPA1L3O60292 1781 aaPredicted RBP11.36□□□□□ -0.59
TMEM254-209ENST00000467529 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
TMEM254-209ENST00000467529 KCNQ3O43525 872 aa11.36□□□□□ -0.59
TMEM254-209ENST00000467529 NECTIN2Q92692 538 aa11.36□□□□□ -0.59
TMEM254-209ENST00000467529 C1orf115Q9H7X2 142 aa11.36□□□□□ -0.59
TMEM254-209ENST00000467529 PRDM11Q9NQV5 511 aa11.36□□□□□ -0.59
TMEM254-209ENST00000467529 SPG7Q9UQ90 795 aa11.35□□□□□ -0.59
TMEM254-209ENST00000467529 CACNA1FO60840 1977 aa11.34□□□□□ -0.59
TMEM254-209ENST00000467529 SMC5Q8IY18 1101 aa11.34□□□□□ -0.59
TMEM254-209ENST00000467529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.34□□□□□ -0.59
TMEM254-209ENST00000467529 SCN11AQ9UI33 1791 aa11.34□□□□□ -0.59
TMEM254-209ENST00000467529 PLEKHG2Q9H7P9 1386 aa11.34□□□□□ -0.59
TMEM254-209ENST00000467529 PHKG2P15735 406 aa11.34□□□□□ -0.59
TMEM254-209ENST00000467529 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
TMEM254-209ENST00000467529 HDGFL1Q5TGJ6 251 aa11.34□□□□□ -0.59
TMEM254-209ENST00000467529 PKD1L3Q7Z443 1732 aa11.33□□□□□ -0.6
TMEM254-209ENST00000467529 WDR17Q8IZU2 1322 aa11.33□□□□□ -0.6
TMEM254-209ENST00000467529 HOXB7P09629 217 aa11.33□□□□□ -0.6
TMEM254-209ENST00000467529 FLIIQ13045 1269 aa11.33□□□□□ -0.6
TMEM254-209ENST00000467529 C8orf34Q49A92 452 aa11.33□□□□□ -0.6
TMEM254-209ENST00000467529 COL5A2P05997 1499 aaPredicted RBP11.33□□□□□ -0.6
TMEM254-209ENST00000467529 KDM6AO15550 1401 aaPredicted RBP11.33□□□□□ -0.6
TMEM254-209ENST00000467529 LTBP4Q8N2S1 1624 aa11.33□□□□□ -0.6
TMEM254-209ENST00000467529 F6X3S4 739 aa11.32□□□□□ -0.6
TMEM254-209ENST00000467529 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
TMEM254-209ENST00000467529 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
TMEM254-209ENST00000467529 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
TMEM254-209ENST00000467529 SLC4A10Q6U841 1118 aa11.32□□□□□ -0.6
TMEM254-209ENST00000467529 CYP27B1O15528 508 aa11.31□□□□□ -0.6
TMEM254-209ENST00000467529 EIF2S2P20042 333 aaKnown RBP11.31□□□□□ -0.6
TMEM254-209ENST00000467529 CCT4P50991 539 aaKnown RBP11.31□□□□□ -0.6
TMEM254-209ENST00000467529 FKBP5Q13451 457 aaPredicted RBP11.31□□□□□ -0.6
TMEM254-209ENST00000467529 TOM1L2Q6ZVM7 507 aa11.31□□□□□ -0.6
TMEM254-209ENST00000467529 MEIS3Q99687 375 aa11.3□□□□□ -0.6
TMEM254-209ENST00000467529 PARP4Q9UKK3 1724 aaKnown RBP11.3□□□□□ -0.6
TMEM254-209ENST00000467529 HEG1Q9ULI3 1381 aa11.3□□□□□ -0.6
TMEM254-209ENST00000467529 NUCB1Q02818 461 aa11.3□□□□□ -0.6
TMEM254-209ENST00000467529 GCC1Q96CN9 775 aa11.3□□□□□ -0.6
TMEM254-209ENST00000467529 CHMP4AQ9BY43 222 aa11.3□□□□□ -0.6
TMEM254-209ENST00000467529 PHAXQ9H814 394 aaKnown RBP11.3□□□□□ -0.6
TMEM254-209ENST00000467529 SLC52A2Q9HAB3 445 aa11.3□□□□□ -0.6
TMEM254-209ENST00000467529 AHDC1Q5TGY3 1603 aaPredicted RBP11.3□□□□□ -0.6
TMEM254-209ENST00000467529 ATP10DQ9P241 1426 aa11.29□□□□□ -0.6
TMEM254-209ENST00000467529 MSH5O43196 834 aa11.29□□□□□ -0.6
TMEM254-209ENST00000467529 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
TMEM254-209ENST00000467529 DCAF5Q96JK2 942 aa11.29□□□□□ -0.6
TMEM254-209ENST00000467529 CARD10Q9BWT7 1032 aa11.29□□□□□ -0.6
TMEM254-209ENST00000467529 STRN4Q9NRL3 753 aa11.29□□□□□ -0.6
TMEM254-209ENST00000467529 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
TMEM254-209ENST00000467529 N4BP2Q86UW6 1770 aaPredicted RBP11.29□□□□□ -0.6
TMEM254-209ENST00000467529 HSP90AB1P08238 724 aaKnown RBP11.28□□□□□ -0.6
TMEM254-209ENST00000467529 ANP32AP39687 249 aaKnown RBP11.28□□□□□ -0.6
TMEM254-209ENST00000467529 EVA1CP58658 441 aa11.28□□□□□ -0.6
TMEM254-209ENST00000467529 LARP1Q6PKG0 1096 aaKnown RBP11.28□□□□□ -0.6
TMEM254-209ENST00000467529 ANKRD44Q8N8A2 993 aa11.28□□□□□ -0.6
TMEM254-209ENST00000467529 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
TMEM254-209ENST00000467529 PRAMEF22A3QJZ6 481 aa11.28□□□□□ -0.6
TMEM254-209ENST00000467529 SLC39A6Q13433 755 aa11.28□□□□□ -0.6
TMEM254-209ENST00000467529 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
TMEM254-209ENST00000467529 CHD1LQ86WJ1 897 aa11.28□□□□□ -0.6
TMEM254-209ENST00000467529 RPAP2Q8IXW5 612 aaPredicted RBP11.28□□□□□ -0.6
TMEM254-209ENST00000467529 MRC1P22897 1456 aa11.28□□□□□ -0.6
TMEM254-209ENST00000467529 PXDNLA1KZ92 1463 aa11.27□□□□□ -0.6
TMEM254-209ENST00000467529 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
TMEM254-209ENST00000467529 ZNF790Q6PG37 636 aa11.27□□□□□ -0.61
TMEM254-209ENST00000467529 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
TMEM254-209ENST00000467529 LNPKQ9C0E8 428 aa11.27□□□□□ -0.61
TMEM254-209ENST00000467529 ANXA1P04083 346 aa11.27□□□□□ -0.61
TMEM254-209ENST00000467529 IL2RBP14784 551 aa11.27□□□□□ -0.61
TMEM254-209ENST00000467529 ANKRD45Q5TZF3 282 aa11.27□□□□□ -0.61
TMEM254-209ENST00000467529 DBF4Q9UBU7 674 aaPredicted RBP11.27□□□□□ -0.61
TMEM254-209ENST00000467529 COL22A1Q8NFW1 1626 aaPredicted RBP11.26□□□□□ -0.61
TMEM254-209ENST00000467529 DCTPP1Q9H773 170 aa11.26□□□□□ -0.61
TMEM254-209ENST00000467529 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
TMEM254-209ENST00000467529 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
TMEM254-209ENST00000467529 C5P01031 1676 aa11.25□□□□□ -0.61
TMEM254-209ENST00000467529 CABP4P57796 275 aa11.25□□□□□ -0.61
TMEM254-209ENST00000467529 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
TMEM254-209ENST00000467529 SHANK3Q9BYB0 1731 aa11.25□□□□□ -0.61
TMEM254-209ENST00000467529 COL14A1Q05707 1796 aaKnown RBP11.25□□□□□ -0.61
TMEM254-209ENST00000467529 PROSER3Q2NL68 480 aa11.25□□□□□ -0.61
TMEM254-209ENST00000467529 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
TMEM254-209ENST00000467529 GNAI2P04899 355 aa11.24□□□□□ -0.61
TMEM254-209ENST00000467529 GNAI3P08754 354 aa11.24□□□□□ -0.61
TMEM254-209ENST00000467529 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
TMEM254-209ENST00000467529 IPO9Q96P70 1041 aaKnown RBP11.24□□□□□ -0.61
TMEM254-209ENST00000467529 COL16A1Q07092 1604 aaPredicted RBP11.23□□□□□ -0.61
TMEM254-209ENST00000467529 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
TMEM254-209ENST00000467529 TTC5Q8N0Z6 440 aa11.23□□□□□ -0.61
TMEM254-209ENST00000467529 DNAAF4Q8WXU2 420 aa11.23□□□□□ -0.61
TMEM254-209ENST00000467529 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
TMEM254-209ENST00000467529 USP44Q9H0E7 712 aa11.23□□□□□ -0.61
TMEM254-209ENST00000467529 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
TMEM254-209ENST00000467529 ADCY9O60503 1353 aa11.23□□□□□ -0.61
TMEM254-209ENST00000467529 SEC24BO95487 1268 aa11.23□□□□□ -0.61
TMEM254-209ENST00000467529 SRCIN1Q9C0H9 1055 aa11.23□□□□□ -0.61
TMEM254-209ENST00000467529 DDX21Q9NR30 783 aaKnown RBP eCLIP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms