RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ZNF385CQ66K41 422 aaPredicted RBP7.71□□□□□ -1.18
VPS50-209ENST00000467326 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
VPS50-209ENST00000467326 CNKSR1Q969H4 720 aa7.71□□□□□ -1.18
VPS50-209ENST00000467326 ESYT1Q9BSJ8 1104 aa7.71□□□□□ -1.18
VPS50-209ENST00000467326 ETNK1Q9HBU6 452 aa7.71□□□□□ -1.18
VPS50-209ENST00000467326 PALM3A6NDB9 673 aaPredicted RBP7.7□□□□□ -1.18
VPS50-209ENST00000467326 STAU1O95793 577 aaKnown RBP7.7□□□□□ -1.18
VPS50-209ENST00000467326 SLURP2P0DP57 97 aa7.7□□□□□ -1.18
VPS50-209ENST00000467326 SCNN1DP51172 638 aa7.7□□□□□ -1.18
VPS50-209ENST00000467326 GTF2IP78347 998 aa7.7□□□□□ -1.18
VPS50-209ENST00000467326 KRT76Q01546 638 aa7.7□□□□□ -1.18
VPS50-209ENST00000467326 PSME1Q06323 249 aa7.7□□□□□ -1.18
VPS50-209ENST00000467326 GPR161Q8N6U8 529 aaKnown RBP7.7□□□□□ -1.18
VPS50-209ENST00000467326 ENAMQ9NRM1 1142 aa7.7□□□□□ -1.18
VPS50-209ENST00000467326 MAFBQ9Y5Q3 323 aaPredicted RBP7.7□□□□□ -1.18
VPS50-209ENST00000467326 GDF10P55107 478 aa7.69□□□□□ -1.18
VPS50-209ENST00000467326 MAP3K10Q02779 954 aa7.69□□□□□ -1.18
VPS50-209ENST00000467326 SV2AQ7L0J3 742 aa7.69□□□□□ -1.18
VPS50-209ENST00000467326 TRIM50Q86XT4 487 aa7.69□□□□□ -1.18
VPS50-209ENST00000467326 CCDC155Q8N6L0 562 aa7.69□□□□□ -1.18
VPS50-209ENST00000467326 PPP1R12CQ9BZL4 782 aa7.69□□□□□ -1.18
VPS50-209ENST00000467326 TFIP11Q9UBB9 837 aaKnown RBP7.69□□□□□ -1.18
VPS50-209ENST00000467326 WASLO00401 505 aaPredicted RBP7.68□□□□□ -1.18
VPS50-209ENST00000467326 TLR1Q15399 786 aa7.68□□□□□ -1.18
VPS50-209ENST00000467326 PRICKLE2Q7Z3G6 844 aa7.68□□□□□ -1.18
VPS50-209ENST00000467326 PCDHGA11Q9Y5H2 935 aa7.68□□□□□ -1.18
VPS50-209ENST00000467326 INHAP05111 366 aa7.67□□□□□ -1.18
VPS50-209ENST00000467326 RHOQP17081 205 aa7.67□□□□□ -1.18
VPS50-209ENST00000467326 ATP1A2P50993 1020 aa7.67□□□□□ -1.18
VPS50-209ENST00000467326 XAGE2Q96GT9 111 aa7.67□□□□□ -1.18
VPS50-209ENST00000467326 HRH3Q9Y5N1 445 aa7.67□□□□□ -1.18
VPS50-209ENST00000467326 CENPCQ03188 943 aa7.66□□□□□ -1.18
VPS50-209ENST00000467326 ZSCAN10Q96SZ4 725 aaPredicted RBP7.66□□□□□ -1.18
VPS50-209ENST00000467326 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
VPS50-209ENST00000467326 FHDC1Q9C0D6 1143 aaPredicted RBP7.66□□□□□ -1.18
VPS50-209ENST00000467326 GRIP2Q9C0E4 1043 aa7.66□□□□□ -1.18
VPS50-209ENST00000467326 MKRN1Q9UHC7 482 aaKnown RBP7.66□□□□□ -1.18
VPS50-209ENST00000467326 SENP3-EIF4A1A0A087X0R7 540 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 CDC14CA4D256 554 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 SLC35F4A4IF30 521 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 PHF20L1A8MW92 1017 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 TMEM229AB2RXF0 380 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 ARHGEF15O94989 841 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 ITGA6P23229 1130 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 GTF2E1P29083 439 aaPredicted RBP7.65□□□□□ -1.18
VPS50-209ENST00000467326 CLDN10P78369 228 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 GNASQ5JWF2 1037 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 OGFOD1Q8N543 542 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 TPCN2Q8NHX9 752 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 DNAAF2Q9NVR5 837 aaKnown RBP7.65□□□□□ -1.18
VPS50-209ENST00000467326 KIAA1024Q9UPX6 916 aa7.65□□□□□ -1.18
VPS50-209ENST00000467326 SPATA31C2B4DYI2 1134 aa7.64□□□□□ -1.19
VPS50-209ENST00000467326 LMOD1P29536 600 aaPredicted RBP7.64□□□□□ -1.19
VPS50-209ENST00000467326 CFAP70Q5T0N1 1121 aa7.64□□□□□ -1.19
VPS50-209ENST00000467326 TMEM214Q6NUQ4 689 aaKnown RBP7.64□□□□□ -1.19
VPS50-209ENST00000467326 NBPF10Q6P3W6 841 aaKnown RBP7.64□□□□□ -1.19
VPS50-209ENST00000467326 TAS1R3Q7RTX0 852 aa7.64□□□□□ -1.19
VPS50-209ENST00000467326 NBPF15Q8N660 670 aa7.64□□□□□ -1.19
VPS50-209ENST00000467326 ZNF594Q96JF6 807 aaPredicted RBP7.64□□□□□ -1.19
VPS50-209ENST00000467326 SERTAD1Q9UHV2 236 aa7.64□□□□□ -1.19
VPS50-209ENST00000467326 ARID3CA6NKF2 412 aa7.63□□□□□ -1.19
VPS50-209ENST00000467326 MSTNO14793 375 aa7.63□□□□□ -1.19
VPS50-209ENST00000467326 POU4F2Q12837 409 aa7.63□□□□□ -1.19
VPS50-209ENST00000467326 VWA5B2Q8N398 1253 aa7.63□□□□□ -1.19
VPS50-209ENST00000467326 RHBDD1Q8TEB9 315 aa7.63□□□□□ -1.19
VPS50-209ENST00000467326 ZNF358Q9NW07 568 aa7.63□□□□□ -1.19
VPS50-209ENST00000467326 BACH1O14867 736 aa7.62□□□□□ -1.19
VPS50-209ENST00000467326 RASA1P20936 1047 aa7.62□□□□□ -1.19
VPS50-209ENST00000467326 SMTNP53814 917 aa7.62□□□□□ -1.19
VPS50-209ENST00000467326 SRSF11Q05519 484 aaKnown RBP7.62□□□□□ -1.19
VPS50-209ENST00000467326 WDR44Q5JSH3 913 aa7.62□□□□□ -1.19
VPS50-209ENST00000467326 RNFT1Q5M7Z0 435 aa7.62□□□□□ -1.19
VPS50-209ENST00000467326 CCDC102BQ68D86 513 aa7.62□□□□□ -1.19
VPS50-209ENST00000467326 SIX5Q8N196 739 aa7.62□□□□□ -1.19
VPS50-209ENST00000467326 LARGE2Q8N3Y3 721 aa7.62□□□□□ -1.19
VPS50-209ENST00000467326 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
VPS50-209ENST00000467326 CCDC97Q96F63 343 aaPredicted RBP7.62□□□□□ -1.19
VPS50-209ENST00000467326 ERICH6Q7L0X2 663 aa7.61□□□□□ -1.19
VPS50-209ENST00000467326 PODNQ7Z5L7 613 aa7.61□□□□□ -1.19
VPS50-209ENST00000467326 PPARGC1BQ86YN6 1023 aaKnown RBP7.61□□□□□ -1.19
VPS50-209ENST00000467326 SLC4A9Q96Q91 983 aa7.61□□□□□ -1.19
VPS50-209ENST00000467326 TIMMDC1Q9NPL8 285 aa7.61□□□□□ -1.19
VPS50-209ENST00000467326 DYRK1BQ9Y463 629 aa7.61□□□□□ -1.19
VPS50-209ENST00000467326 RBM19Q9Y4C8 960 aaKnown RBP7.61□□□□□ -1.19
VPS50-209ENST00000467326 A6NJY4 79 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L15C9J2P7 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L10C9JJH3 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L13C9JLJ4 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L12C9JPN9 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L11C9JVI0 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L21D6R901 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L18D6R9N7 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L22D6RA61 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L17D6RBQ6 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L19D6RCP7 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L20D6RJB6 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 ADAMTS2O95450 1211 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 USP17L24Q0WX57 530 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 MTFR1Q15390 333 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 CRTC2Q53ET0 693 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms