RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 GDF11O95390 407 aa10.07□□□□□ -0.8
PRPF40A-205ENST00000467114 THBS1P07996 1170 aa10.07□□□□□ -0.8
PRPF40A-205ENST00000467114 SOX11P35716 441 aa10.07□□□□□ -0.8
PRPF40A-205ENST00000467114 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
PRPF40A-205ENST00000467114 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
PRPF40A-205ENST00000467114 PHKA2P46019 1235 aa10.06□□□□□ -0.8
PRPF40A-205ENST00000467114 C4orf17Q53FE4 359 aa10.06□□□□□ -0.8
PRPF40A-205ENST00000467114 OXLD1Q5BKU9 147 aa10.06□□□□□ -0.8
PRPF40A-205ENST00000467114 GNASQ5JWF2 1037 aa10.06□□□□□ -0.8
PRPF40A-205ENST00000467114 TMEM214Q6NUQ4 689 aaKnown RBP10.06□□□□□ -0.8
PRPF40A-205ENST00000467114 STAU1O95793 577 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-205ENST00000467114 GTF2E1P29083 439 aaPredicted RBP10.05□□□□□ -0.8
PRPF40A-205ENST00000467114 MARSP56192 900 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-205ENST00000467114 PPARGC1BQ86YN6 1023 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-205ENST00000467114 KCTD17Q8N5Z5 321 aa10.05□□□□□ -0.8
PRPF40A-205ENST00000467114 ENAMQ9NRM1 1142 aa10.05□□□□□ -0.8
PRPF40A-205ENST00000467114 MX2P20592 715 aa10.04□□□□□ -0.8
PRPF40A-205ENST00000467114 SEMA3FQ13275 785 aa10.04□□□□□ -0.8
PRPF40A-205ENST00000467114 LBRQ14739 615 aaKnown RBP10.04□□□□□ -0.8
PRPF40A-205ENST00000467114 PLPP7Q8NBV4 271 aa10.04□□□□□ -0.8
PRPF40A-205ENST00000467114 RHBDD1Q8TEB9 315 aa10.04□□□□□ -0.8
PRPF40A-205ENST00000467114 SCARF2Q96GP6 870 aaPredicted RBP10.04□□□□□ -0.8
PRPF40A-205ENST00000467114 CFHR5Q9BXR6 569 aa10.04□□□□□ -0.8
PRPF40A-205ENST00000467114 GPAMQ9HCL2 828 aa10.04□□□□□ -0.8
PRPF40A-205ENST00000467114 BCRP11274 1271 aa10.03□□□□□ -0.8
PRPF40A-205ENST00000467114 SCNN1DP51172 638 aa10.03□□□□□ -0.8
PRPF40A-205ENST00000467114 UBAP2LQ14157 1087 aaKnown RBP10.03□□□□□ -0.8
PRPF40A-205ENST00000467114 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
PRPF40A-205ENST00000467114 NSFL1CQ9UNZ2 370 aaKnown RBP10.03□□□□□ -0.8
PRPF40A-205ENST00000467114 COG6Q9Y2V7 657 aa10.03□□□□□ -0.8
PRPF40A-205ENST00000467114 INHAP05111 366 aa10.02□□□□□ -0.81
PRPF40A-205ENST00000467114 IRS1P35568 1242 aa10.02□□□□□ -0.81
PRPF40A-205ENST00000467114 TLR1Q15399 786 aa10.02□□□□□ -0.81
PRPF40A-205ENST00000467114 KANK3Q6NY19 840 aa10.02□□□□□ -0.81
PRPF40A-205ENST00000467114 ACDQ96AP0 544 aa10.02□□□□□ -0.81
PRPF40A-205ENST00000467114 MSX1P28360 303 aa10.01□□□□□ -0.81
PRPF40A-205ENST00000467114 GDF10P55107 478 aa10□□□□□ -0.81
PRPF40A-205ENST00000467114 CSB-PGBD3P0DP91 1061 aa9.99□□□□□ -0.81
PRPF40A-205ENST00000467114 MAP2K3P46734 347 aa9.99□□□□□ -0.81
PRPF40A-205ENST00000467114 PGBD3Q8N328 593 aa9.99□□□□□ -0.81
PRPF40A-205ENST00000467114 RUBCNLQ9H714 662 aa9.99□□□□□ -0.81
PRPF40A-205ENST00000467114 PHF24Q9UPV7 400 aa9.99□□□□□ -0.81
PRPF40A-205ENST00000467114 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
PRPF40A-205ENST00000467114 DNMT3AQ9Y6K1 912 aaPredicted RBP9.98□□□□□ -0.81
PRPF40A-205ENST00000467114 PIK3CDO00329 1044 aa9.97□□□□□ -0.81
PRPF40A-205ENST00000467114 SMTNP53814 917 aa9.97□□□□□ -0.81
PRPF40A-205ENST00000467114 EFHC2Q5JST6 749 aa9.97□□□□□ -0.81
PRPF40A-205ENST00000467114 ALG2Q9H553 416 aa9.97□□□□□ -0.81
PRPF40A-205ENST00000467114 TMEM229AB2RXF0 380 aa9.96□□□□□ -0.82
PRPF40A-205ENST00000467114 OIP5O43482 229 aa9.96□□□□□ -0.82
PRPF40A-205ENST00000467114 SLC4A9Q96Q91 983 aa9.96□□□□□ -0.82
PRPF40A-205ENST00000467114 OXCT2Q9BYC2 517 aaPredicted RBP9.96□□□□□ -0.82
PRPF40A-205ENST00000467114 NDFIP2Q9NV92 336 aa9.96□□□□□ -0.82
PRPF40A-205ENST00000467114 ATXN7L1Q9ULK2 861 aaPredicted RBP9.96□□□□□ -0.82
PRPF40A-205ENST00000467114 PLA2G4AP47712 749 aa9.95□□□□□ -0.82
PRPF40A-205ENST00000467114 TBC1D9Q6ZT07 1266 aa9.95□□□□□ -0.82
PRPF40A-205ENST00000467114 ZNF295-AS1Q8N0V1 137 aa9.95□□□□□ -0.82
PRPF40A-205ENST00000467114 NEDD1Q8NHV4 660 aa9.95□□□□□ -0.82
PRPF40A-205ENST00000467114 C1orf216Q8TAB5 229 aa9.95□□□□□ -0.82
PRPF40A-205ENST00000467114 NIFKQ9BYG3 293 aaKnown RBP9.95□□□□□ -0.82
PRPF40A-205ENST00000467114 PCDHGA11Q9Y5H2 935 aa9.95□□□□□ -0.82
PRPF40A-205ENST00000467114 CNTNAP5Q8WYK1 1306 aa9.94□□□□□ -0.82
PRPF40A-205ENST00000467114 LZTS3O60299 673 aaPredicted RBP9.94□□□□□ -0.82
PRPF40A-205ENST00000467114 MTFR1Q15390 333 aa9.94□□□□□ -0.82
PRPF40A-205ENST00000467114 NFATC2IPQ8NCF5 419 aa9.94□□□□□ -0.82
PRPF40A-205ENST00000467114 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
PRPF40A-205ENST00000467114 IQSEC3Q9UPP2 1182 aaPredicted RBP9.94□□□□□ -0.82
PRPF40A-205ENST00000467114 PHF20L1A8MW92 1017 aa9.93□□□□□ -0.82
PRPF40A-205ENST00000467114 ATP4AP20648 1035 aa9.93□□□□□ -0.82
PRPF40A-205ENST00000467114 WWC1Q8IX03 1113 aa9.93□□□□□ -0.82
PRPF40A-205ENST00000467114 BEND7Q8N7W2 519 aaPredicted RBP9.93□□□□□ -0.82
PRPF40A-205ENST00000467114 POM121Q96HA1 1249 aa9.93□□□□□ -0.82
PRPF40A-205ENST00000467114 DNAAF2Q9NVR5 837 aaKnown RBP9.93□□□□□ -0.82
PRPF40A-205ENST00000467114 A6NJY4 79 aa9.92□□□□□ -0.82
PRPF40A-205ENST00000467114 CDK2AP1O14519 115 aa9.92□□□□□ -0.82
PRPF40A-205ENST00000467114 BNIP3LO60238 219 aa9.92□□□□□ -0.82
PRPF40A-205ENST00000467114 EML3Q32P44 896 aa9.92□□□□□ -0.82
PRPF40A-205ENST00000467114 ABHD17AQ96GS6 310 aa9.92□□□□□ -0.82
PRPF40A-205ENST00000467114 SERTAD1Q9UHV2 236 aa9.92□□□□□ -0.82
PRPF40A-205ENST00000467114 GDF2Q9UK05 429 aaPredicted RBP9.92□□□□□ -0.82
PRPF40A-205ENST00000467114 SKIP12755 728 aa9.91□□□□□ -0.82
PRPF40A-205ENST00000467114 FOXK2Q01167 660 aa9.91□□□□□ -0.82
PRPF40A-205ENST00000467114 FIGNL1Q6PIW4 674 aa9.91□□□□□ -0.82
PRPF40A-205ENST00000467114 PODNQ7Z5L7 613 aa9.91□□□□□ -0.82
PRPF40A-205ENST00000467114 NLRP8Q86W28 1048 aa9.91□□□□□ -0.82
PRPF40A-205ENST00000467114 NOD1Q9Y239 953 aa9.91□□□□□ -0.82
PRPF40A-205ENST00000467114 C2CD2LO14523 706 aa9.9□□□□□ -0.82
PRPF40A-205ENST00000467114 IGHA1P01876 353 aa9.9□□□□□ -0.82
PRPF40A-205ENST00000467114 FGFR3P22607 806 aa9.9□□□□□ -0.82
PRPF40A-205ENST00000467114 FLIIQ13045 1269 aa9.9□□□□□ -0.82
PRPF40A-205ENST00000467114 C1orf229Q6ZS94 237 aaPredicted RBP9.9□□□□□ -0.82
PRPF40A-205ENST00000467114 RAD21O60216 631 aa9.89□□□□□ -0.83
PRPF40A-205ENST00000467114 GOLGA6L1Q8N7Z2 621 aa9.89□□□□□ -0.83
PRPF40A-205ENST00000467114 AIDAQ96BJ3 306 aa9.89□□□□□ -0.83
PRPF40A-205ENST00000467114 ZCCHC2Q9C0B9 1178 aaKnown RBP9.89□□□□□ -0.83
PRPF40A-205ENST00000467114 PCDHGC4Q9Y5F7 938 aa9.89□□□□□ -0.83
PRPF40A-205ENST00000467114 USP3Q9Y6I4 520 aa9.89□□□□□ -0.83
PRPF40A-205ENST00000467114 SHISA8B8ZZ34 492 aa9.88□□□□□ -0.83
PRPF40A-205ENST00000467114 BMP4P12644 408 aa9.88□□□□□ -0.83
PRPF40A-205ENST00000467114 GTF2IP78347 998 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms