RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 GNB5O14775 395 aa10.53□□□□□ -0.72
XRN1-206ENST00000467077 BMP4P12644 408 aa10.53□□□□□ -0.72
XRN1-206ENST00000467077 LBRQ14739 615 aaKnown RBP10.53□□□□□ -0.72
XRN1-206ENST00000467077 FBXO45P0C2W1 286 aa10.52□□□□□ -0.73
XRN1-206ENST00000467077 RFC5P40937 340 aa10.52□□□□□ -0.73
XRN1-206ENST00000467077 SLCO4C1Q6ZQN7 724 aa10.52□□□□□ -0.73
XRN1-206ENST00000467077 C1orf229Q6ZS94 237 aaPredicted RBP10.52□□□□□ -0.73
XRN1-206ENST00000467077 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.73
XRN1-206ENST00000467077 NOP53Q9NZM5 478 aaKnown RBP10.52□□□□□ -0.73
XRN1-206ENST00000467077 SCTRP47872 440 aa10.51□□□□□ -0.73
XRN1-206ENST00000467077 MCCD1P59942 119 aaPredicted RBP10.51□□□□□ -0.73
XRN1-206ENST00000467077 EFHC2Q5JST6 749 aa10.51□□□□□ -0.73
XRN1-206ENST00000467077 GNASQ5JWF2 1037 aa10.51□□□□□ -0.73
XRN1-206ENST00000467077 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
XRN1-206ENST00000467077 ATXN7L1Q9ULK2 861 aaPredicted RBP10.51□□□□□ -0.73
XRN1-206ENST00000467077 ZNF330Q9Y3S2 320 aaPredicted RBP10.51□□□□□ -0.73
XRN1-206ENST00000467077 PHKA2P46019 1235 aa10.5□□□□□ -0.73
XRN1-206ENST00000467077 ZSCAN10Q96SZ4 725 aaPredicted RBP10.5□□□□□ -0.73
XRN1-206ENST00000467077 KDM4CQ9H3R0 1056 aa10.5□□□□□ -0.73
XRN1-206ENST00000467077 OSBPL3Q9H4L5 887 aa10.5□□□□□ -0.73
XRN1-206ENST00000467077 SUV39H2Q9H5I1 410 aa10.5□□□□□ -0.73
XRN1-206ENST00000467077 TRAK2O60296 914 aa10.49□□□□□ -0.73
XRN1-206ENST00000467077 GNRH1P01148 92 aa10.49□□□□□ -0.73
XRN1-206ENST00000467077 THBS1P07996 1170 aa10.49□□□□□ -0.73
XRN1-206ENST00000467077 CNKSR1Q969H4 720 aa10.49□□□□□ -0.73
XRN1-206ENST00000467077 ESYT1Q9BSJ8 1104 aa10.49□□□□□ -0.73
XRN1-206ENST00000467077 FAM117AQ9C073 453 aa10.49□□□□□ -0.73
XRN1-206ENST00000467077 C1QTNF9BB2RNN3 333 aa10.48□□□□□ -0.73
XRN1-206ENST00000467077 TMEM214Q6NUQ4 689 aaKnown RBP10.48□□□□□ -0.73
XRN1-206ENST00000467077 RUBCNLQ9H714 662 aa10.48□□□□□ -0.73
XRN1-206ENST00000467077 GGA1Q9UJY5 639 aa10.48□□□□□ -0.73
XRN1-206ENST00000467077 LINC00114Q6XXX2 140 aa10.47□□□□□ -0.73
XRN1-206ENST00000467077 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
XRN1-206ENST00000467077 MYCP01106 439 aaPredicted RBP10.46□□□□□ -0.73
XRN1-206ENST00000467077 FGFR3P22607 806 aa10.46□□□□□ -0.73
XRN1-206ENST00000467077 CENPCQ03188 943 aa10.46□□□□□ -0.73
XRN1-206ENST00000467077 CD163Q86VB7 1156 aa10.46□□□□□ -0.73
XRN1-206ENST00000467077 ABHD17AQ96GS6 310 aa10.46□□□□□ -0.73
XRN1-206ENST00000467077 TMEM259Q4ZIN3 620 aa10.45□□□□□ -0.74
XRN1-206ENST00000467077 IL2RAP01589 272 aa10.44□□□□□ -0.74
XRN1-206ENST00000467077 NR1H3Q13133 447 aa10.44□□□□□ -0.74
XRN1-206ENST00000467077 CHRNA4P43681 627 aa10.43□□□□□ -0.74
XRN1-206ENST00000467077 DGKGP49619 791 aa10.43□□□□□ -0.74
XRN1-206ENST00000467077 ARAFP10398 606 aa10.42□□□□□ -0.74
XRN1-206ENST00000467077 EPXP11678 715 aa10.42□□□□□ -0.74
XRN1-206ENST00000467077 HOXB4P17483 251 aaPredicted RBP10.42□□□□□ -0.74
XRN1-206ENST00000467077 UBAP2LQ14157 1087 aaKnown RBP10.42□□□□□ -0.74
XRN1-206ENST00000467077 RNF135Q8IUD6 432 aa10.42□□□□□ -0.74
XRN1-206ENST00000467077 SEMA6BQ9H3T3 888 aa10.42□□□□□ -0.74
XRN1-206ENST00000467077 MSX1P28360 303 aa10.41□□□□□ -0.74
XRN1-206ENST00000467077 C4orf17Q53FE4 359 aa10.41□□□□□ -0.74
XRN1-206ENST00000467077 ESCO1Q5FWF5 840 aa10.41□□□□□ -0.74
XRN1-206ENST00000467077 ZMYM1Q5SVZ6 1142 aa10.41□□□□□ -0.74
XRN1-206ENST00000467077 FIGNL1Q6PIW4 674 aa10.41□□□□□ -0.74
XRN1-206ENST00000467077 BTBD6Q96KE9 485 aa10.41□□□□□ -0.74
XRN1-206ENST00000467077 C2CD2LO14523 706 aa10.4□□□□□ -0.74
XRN1-206ENST00000467077 NEURL1BA8MQ27 555 aa10.39□□□□□ -0.75
XRN1-206ENST00000467077 BNIP3LO60238 219 aa10.39□□□□□ -0.75
XRN1-206ENST00000467077 CTBSQ01459 385 aa10.39□□□□□ -0.75
XRN1-206ENST00000467077 RHBDD1Q8TEB9 315 aa10.39□□□□□ -0.75
XRN1-206ENST00000467077 PCMTD1Q96MG8 357 aaPredicted RBP10.39□□□□□ -0.75
XRN1-206ENST00000467077 DOC2BQ14184 412 aa10.38□□□□□ -0.75
XRN1-206ENST00000467077 GJD4Q96KN9 370 aaPredicted RBP10.38□□□□□ -0.75
XRN1-206ENST00000467077 SCO2A0A1W2PP80 73 aa10.37□□□□□ -0.75
XRN1-206ENST00000467077 TBC1D9Q6ZT07 1266 aa10.37□□□□□ -0.75
XRN1-206ENST00000467077 CHSY3Q70JA7 882 aa10.37□□□□□ -0.75
XRN1-206ENST00000467077 XAGE2Q96GT9 111 aa10.37□□□□□ -0.75
XRN1-206ENST00000467077 FHDC1Q9C0D6 1143 aaPredicted RBP10.37□□□□□ -0.75
XRN1-206ENST00000467077 CRISPLD1Q9H336 500 aa10.37□□□□□ -0.75
XRN1-206ENST00000467077 NDFIP2Q9NV92 336 aa10.37□□□□□ -0.75
XRN1-206ENST00000467077 KRTAP9-2Q9BYQ4 174 aa10.36□□□□□ -0.75
XRN1-206ENST00000467077 HRH3Q9Y5N1 445 aa10.36□□□□□ -0.75
XRN1-206ENST00000467077 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.35□□□□□ -0.75
XRN1-206ENST00000467077 ADH6P28332 368 aa10.35□□□□□ -0.75
XRN1-206ENST00000467077 GATA4P43694 442 aa10.35□□□□□ -0.75
XRN1-206ENST00000467077 TLR1Q15399 786 aa10.34□□□□□ -0.75
XRN1-206ENST00000467077 PCDHGC4Q9Y5F7 938 aa10.34□□□□□ -0.75
XRN1-206ENST00000467077 ITGB7P26010 798 aa10.33□□□□□ -0.76
XRN1-206ENST00000467077 PLA2G4AP47712 749 aa10.33□□□□□ -0.76
XRN1-206ENST00000467077 SPATA31C1P0DKV0 1188 aa10.32□□□□□ -0.76
XRN1-206ENST00000467077 KRTAP9-6A0A140TA67 174 aa10.31□□□□□ -0.76
XRN1-206ENST00000467077 PPARGC1BQ86YN6 1023 aaKnown RBP10.31□□□□□ -0.76
XRN1-206ENST00000467077 C1orf216Q8TAB5 229 aa10.31□□□□□ -0.76
XRN1-206ENST00000467077 GOPCQ9HD26 462 aa10.31□□□□□ -0.76
XRN1-206ENST00000467077 AVENQ9NQS1 362 aaPredicted RBP10.31□□□□□ -0.76
XRN1-206ENST00000467077 ATXN7O15265 892 aaPredicted RBP10.3□□□□□ -0.76
XRN1-206ENST00000467077 NLRP8Q86W28 1048 aa10.3□□□□□ -0.76
XRN1-206ENST00000467077 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
XRN1-206ENST00000467077 ZCCHC2Q9C0B9 1178 aaKnown RBP10.3□□□□□ -0.76
XRN1-206ENST00000467077 NDUFB9Q9Y6M9 179 aa10.3□□□□□ -0.76
XRN1-206ENST00000467077 DCDC2BA2VCK2 349 aa10.29□□□□□ -0.76
XRN1-206ENST00000467077 SPDYE3A6NKU9 549 aa10.29□□□□□ -0.76
XRN1-206ENST00000467077 CCDC85AQ96PX6 553 aaPredicted RBP10.29□□□□□ -0.76
XRN1-206ENST00000467077 APBB1O00213 710 aa10.28□□□□□ -0.76
XRN1-206ENST00000467077 PLVAPQ9BX97 442 aa10.28□□□□□ -0.76
XRN1-206ENST00000467077 ETNK1Q9HBU6 452 aa10.28□□□□□ -0.76
XRN1-206ENST00000467077 DNAAF2Q9NVR5 837 aaKnown RBP10.28□□□□□ -0.76
XRN1-206ENST00000467077 CD33P20138 364 aa10.27□□□□□ -0.77
XRN1-206ENST00000467077 PRRT3Q5FWE3 981 aa10.27□□□□□ -0.77
XRN1-206ENST00000467077 FAM182BQ5T319 152 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms