RNA–Protein interactions for RNA: ENST00000466793.1

SMPDL3B-204, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 3

Gene SMPDL3B, Length 726 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-204ENST00000466793 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
SMPDL3B-204ENST00000466793 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
SMPDL3B-204ENST00000466793 C1QTNF8P60827 252 aa16.96■□□□□ 0.31
SMPDL3B-204ENST00000466793 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
SMPDL3B-204ENST00000466793 TMOD3Q9NYL9 352 aa16.96■□□□□ 0.31
SMPDL3B-204ENST00000466793 ADCY9O60503 1353 aa16.95■□□□□ 0.3
SMPDL3B-204ENST00000466793 GNPATO15228 680 aa16.95■□□□□ 0.3
SMPDL3B-204ENST00000466793 TJP1Q07157 1748 aa16.95■□□□□ 0.3
SMPDL3B-204ENST00000466793 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
SMPDL3B-204ENST00000466793 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
SMPDL3B-204ENST00000466793 N4BP2Q86UW6 1770 aaPredicted RBP16.93■□□□□ 0.3
SMPDL3B-204ENST00000466793 ARHGEF1Q92888 912 aaKnown RBP16.93■□□□□ 0.3
SMPDL3B-204ENST00000466793 AK7Q96M32 723 aa16.93■□□□□ 0.3
SMPDL3B-204ENST00000466793 SRP68Q9UHB9 627 aaKnown RBP16.93■□□□□ 0.3
SMPDL3B-204ENST00000466793 CD2APQ9Y5K6 639 aa16.93■□□□□ 0.3
SMPDL3B-204ENST00000466793 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
SMPDL3B-204ENST00000466793 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
SMPDL3B-204ENST00000466793 KCNA3P22001 575 aa16.92■□□□□ 0.3
SMPDL3B-204ENST00000466793 SULT6B1Q6IMI4 303 aa16.92■□□□□ 0.3
SMPDL3B-204ENST00000466793 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
SMPDL3B-204ENST00000466793 ATP10DQ9P241 1426 aa16.91■□□□□ 0.3
SMPDL3B-204ENST00000466793 GYS1P13807 737 aa16.91■□□□□ 0.3
SMPDL3B-204ENST00000466793 SSFA2P28290 1259 aa16.91■□□□□ 0.3
SMPDL3B-204ENST00000466793 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
SMPDL3B-204ENST00000466793 KIF13BQ9NQT8 1826 aa16.91■□□□□ 0.3
SMPDL3B-204ENST00000466793 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
SMPDL3B-204ENST00000466793 CICQ96RK0 1608 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3B-204ENST00000466793 MMP10P09238 476 aa16.9■□□□□ 0.3
SMPDL3B-204ENST00000466793 INTS5Q6P9B9 1019 aaKnown RBP16.9■□□□□ 0.3
SMPDL3B-204ENST00000466793 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
SMPDL3B-204ENST00000466793 COL3A1P02461 1466 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3B-204ENST00000466793 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
SMPDL3B-204ENST00000466793 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
SMPDL3B-204ENST00000466793 PTCD1O75127 700 aaKnown RBP16.89■□□□□ 0.29
SMPDL3B-204ENST00000466793 DDR1Q08345 913 aa16.89■□□□□ 0.29
SMPDL3B-204ENST00000466793 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
SMPDL3B-204ENST00000466793 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
SMPDL3B-204ENST00000466793 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
SMPDL3B-204ENST00000466793 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.29
SMPDL3B-204ENST00000466793 HMOX1P09601 288 aa16.88■□□□□ 0.29
SMPDL3B-204ENST00000466793 MTHFSP49914 203 aa16.88■□□□□ 0.29
SMPDL3B-204ENST00000466793 SLC39A6Q13433 755 aa16.88■□□□□ 0.29
SMPDL3B-204ENST00000466793 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
SMPDL3B-204ENST00000466793 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
SMPDL3B-204ENST00000466793 FKBP8Q14318 412 aa16.86■□□□□ 0.29
SMPDL3B-204ENST00000466793 MTHFSDQ2M296 383 aaKnown RBP16.86■□□□□ 0.29
SMPDL3B-204ENST00000466793 FLAD1Q8NFF5 587 aa16.86■□□□□ 0.29
SMPDL3B-204ENST00000466793 BCL2L12Q9HB09 334 aa16.86■□□□□ 0.29
SMPDL3B-204ENST00000466793 BRCA1P38398 1863 aaKnown RBP16.86■□□□□ 0.29
SMPDL3B-204ENST00000466793 C10orf71Q711Q0 1435 aa16.86■□□□□ 0.29
SMPDL3B-204ENST00000466793 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
SMPDL3B-204ENST00000466793 DPEP1P16444 411 aa16.85■□□□□ 0.29
SMPDL3B-204ENST00000466793 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
SMPDL3B-204ENST00000466793 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
SMPDL3B-204ENST00000466793 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
SMPDL3B-204ENST00000466793 DNAJC10Q8IXB1 793 aa16.85■□□□□ 0.29
SMPDL3B-204ENST00000466793 ZNF526Q8TF50 670 aaPredicted RBP16.85■□□□□ 0.29
SMPDL3B-204ENST00000466793 CNTNAP4Q9C0A0 1308 aa16.85■□□□□ 0.29
SMPDL3B-204ENST00000466793 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
SMPDL3B-204ENST00000466793 PRELPP51888 382 aa16.84■□□□□ 0.29
SMPDL3B-204ENST00000466793 CABP4P57796 275 aa16.84■□□□□ 0.29
SMPDL3B-204ENST00000466793 RC3H1Q5TC82 1133 aaKnown RBP16.84■□□□□ 0.29
SMPDL3B-204ENST00000466793 MRC1P22897 1456 aa16.83■□□□□ 0.28
SMPDL3B-204ENST00000466793 CEP350Q5VT06 3117 aa16.82■□□□□ 0.28
SMPDL3B-204ENST00000466793 KIF3CO14782 793 aa16.82■□□□□ 0.28
SMPDL3B-204ENST00000466793 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
SMPDL3B-204ENST00000466793 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
SMPDL3B-204ENST00000466793 TRAPPC3LQ5T215 181 aa16.82■□□□□ 0.28
SMPDL3B-204ENST00000466793 PLEKHG2Q9H7P9 1386 aa16.81■□□□□ 0.28
SMPDL3B-204ENST00000466793 GRIN3BO60391 1043 aa16.81■□□□□ 0.28
SMPDL3B-204ENST00000466793 RTCBQ9Y3I0 505 aaKnown RBP16.81■□□□□ 0.28
SMPDL3B-204ENST00000466793 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
SMPDL3B-204ENST00000466793 KCNQ3O43525 872 aa16.8■□□□□ 0.28
SMPDL3B-204ENST00000466793 TM4SF1P30408 202 aa16.8■□□□□ 0.28
SMPDL3B-204ENST00000466793 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
SMPDL3B-204ENST00000466793 SLC52A2Q9HAB3 445 aa16.8■□□□□ 0.28
SMPDL3B-204ENST00000466793 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
SMPDL3B-204ENST00000466793 GIGYF1O75420 1035 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-204ENST00000466793 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-204ENST00000466793 CHRNA5P30532 468 aa16.79■□□□□ 0.28
SMPDL3B-204ENST00000466793 AMOTQ4VCS5 1084 aa16.79■□□□□ 0.28
SMPDL3B-204ENST00000466793 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
SMPDL3B-204ENST00000466793 POLRMTO00411 1230 aaKnown RBP16.78■□□□□ 0.28
SMPDL3B-204ENST00000466793 ZBTB1Q9Y2K1 713 aa16.78■□□□□ 0.28
SMPDL3B-204ENST00000466793 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.28
SMPDL3B-204ENST00000466793 UBR2Q8IWV8 1755 aa16.77■□□□□ 0.28
SMPDL3B-204ENST00000466793 SOS1Q07889 1333 aaPredicted RBP16.77■□□□□ 0.28
SMPDL3B-204ENST00000466793 AFDNP55196 1824 aaKnown RBP16.76■□□□□ 0.27
SMPDL3B-204ENST00000466793 AKAP4Q5JQC9 854 aa16.76■□□□□ 0.27
SMPDL3B-204ENST00000466793 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
SMPDL3B-204ENST00000466793 PRAMEF22A3QJZ6 481 aa16.75■□□□□ 0.27
SMPDL3B-204ENST00000466793 USPL1Q5W0Q7 1092 aa16.75■□□□□ 0.27
SMPDL3B-204ENST00000466793 NLGN1Q8N2Q7 840 aa16.75■□□□□ 0.27
SMPDL3B-204ENST00000466793 BCS1LQ9Y276 419 aa16.75■□□□□ 0.27
SMPDL3B-204ENST00000466793 NRXN2Q9P2S2 1712 aa16.74■□□□□ 0.27
SMPDL3B-204ENST00000466793 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
SMPDL3B-204ENST00000466793 RFC4P35249 363 aa16.74■□□□□ 0.27
SMPDL3B-204ENST00000466793 NFIXQ14938 502 aa16.74■□□□□ 0.27
SMPDL3B-204ENST00000466793 NMRK2Q9NPI5 230 aa16.74■□□□□ 0.27
SMPDL3B-204ENST00000466793 TGFB2P61812 414 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms