RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 FOXK1P85037 733 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 HSP90AB2PQ58FF8 381 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 GET4Q7L5D6 327 aaPredicted RBP5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 RPS6KC1Q96S38 1066 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 BACH2Q9BYV9 841 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 MYBBP1AQ9BQG0 1328 aaKnown RBP5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 ZNF644Q9H582 1327 aaPredicted RBP5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 NPC1L1Q9UHC9 1359 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 ABCC2Q92887 1545 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 GTF2E1P29083 439 aaPredicted RBP5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 RFC5P40937 340 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 RBM33Q96EV2 1170 aaKnown RBP5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 UCN2Q96RP3 112 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 MRS2Q9HD23 443 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 CFDP1Q9UEE9 299 aaPredicted RBP5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 SH3BP1Q9Y3L3 701 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 IFT172Q9UG01 1749 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 HAX1O00165 279 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 AMOTL1Q8IY63 956 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 TMC2Q8TDI7 906 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 CHIC2Q9UKJ5 165 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 COL4A3BPQ9Y5P4 624 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 A2MP01023 1474 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 TRPM2O94759 1503 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 MYOM1P52179 1685 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 C19orf67A6NJJ6 358 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 FMNL3Q8IVF7 1028 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 ZNF512BQ96KM6 892 aaPredicted RBP5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 SENP7Q9BQF6 1050 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 PCDH12Q9NPG4 1184 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 FBXO9Q9UK97 447 aaPredicted RBP5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 RTEL1-TNFRSF6BF6WH68 1400 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 TTC37Q6PGP7 1564 aa5.61□□□□□ -1.51
CLCA3P-202ENST00000466454 PALM3A6NDB9 673 aaPredicted RBP5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 MARSP56192 900 aaKnown RBP5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 ZNF280DQ6N043 979 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 MAP3K20Q9NYL2 800 aaKnown RBP5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 PTPRTO14522 1441 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 POTEFA5A3E0 1075 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 SOWAHDA6NJG2 315 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 KIF3CO14782 793 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 PER1O15534 1290 aaPredicted RBP5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 ATG7O95352 703 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 LIG1P18858 919 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 MAP3K9P80192 1104 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 TMUB1Q9BVT8 246 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 VIRMAQ69YN4 1812 aaKnown RBP5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 TET3O43151 1660 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 POLD1P28340 1107 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 SCNN1AP37088 669 aa5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 IRX5P78411 483 aaPredicted RBP5.6□□□□□ -1.51
CLCA3P-202ENST00000466454 ABCC1P33527 1531 aa5.59□□□□□ -1.51
CLCA3P-202ENST00000466454 SERPINB4P48594 390 aa5.59□□□□□ -1.51
CLCA3P-202ENST00000466454 PRKAG2Q9UGJ0 569 aa5.59□□□□□ -1.51
CLCA3P-202ENST00000466454 MRPL42Q9Y6G3 142 aaKnown RBP5.59□□□□□ -1.51
CLCA3P-202ENST00000466454 KLF15Q9UIH9 416 aa5.59□□□□□ -1.51
CLCA3P-202ENST00000466454 ZMIZ1Q9ULJ6 1067 aa5.59□□□□□ -1.51
CLCA3P-202ENST00000466454 BOLA1Q9Y3E2 137 aa5.59□□□□□ -1.51
CLCA3P-202ENST00000466454 USP32Q8NFA0 1604 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 GPR37L1O60883 481 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 BIRC2Q13490 618 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 ZNF746Q6NUN9 644 aaPredicted RBP5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 METTL16Q86W50 562 aaKnown RBP5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 BANK1Q8NDB2 785 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 IL17RAQ96F46 866 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 JPH4Q96JJ6 628 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 MKRN1Q9UHC7 482 aaKnown RBP5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 CHD1O14646 1710 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 NUP155O75694 1391 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 LMOD1P29536 600 aaPredicted RBP5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 MAP9Q49MG5 647 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 SCYL1Q96KG9 808 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 IFT57Q9NWB7 429 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 INO80Q9ULG1 1556 aaPredicted RBP5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 TIE1P35590 1138 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 ARMCX6Q7L4S7 300 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 RAVER1Q8IY67 606 aaKnown RBP5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 CXorf38Q8TB03 319 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 STK32AQ8WU08 396 aa5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 CCDC85AQ96PX6 553 aaPredicted RBP5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 DDX56Q9NY93 547 aaKnown RBP5.58□□□□□ -1.52
CLCA3P-202ENST00000466454 SYCP2Q9BX26 1530 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 NRXN1Q9ULB1 1477 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 ABCA9Q8IUA7 1624 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 HMGB1P1B2RPK0 211 aaPredicted RBP5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 GTF2F1P35269 517 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 BRINP2Q9C0B6 783 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 TMX4Q9H1E5 349 aaPredicted RBP5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 TTF2Q9UNY4 1162 aaKnown RBP5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 LMTK2Q8IWU2 1503 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 MYOM2P54296 1465 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 CCDC144AA2RUR9 1427 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 PIK3C2GO75747 1445 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 LMOD3Q0VAK6 560 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 WDR78Q5VTH9 848 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 ZKSCAN2Q63HK3 967 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 ATL2Q8NHH9 583 aa5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 KHSRPQ92945 711 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLCA3P-202ENST00000466454 ZC3H13Q5T200 1668 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms