RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 STK26Q9P289 416 aa9.25□□□□□ -0.93
TPM3-214ENST00000466010 PCDHB15Q9Y5E8 787 aa9.25□□□□□ -0.93
TPM3-214ENST00000466010 EIF3AQ14152 1382 aaKnown RBP9.24□□□□□ -0.93
TPM3-214ENST00000466010 KDM4AO75164 1064 aa9.24□□□□□ -0.93
TPM3-214ENST00000466010 ESCO1Q5FWF5 840 aa9.24□□□□□ -0.93
TPM3-214ENST00000466010 TMEM132EQ6IEE7 984 aa9.24□□□□□ -0.93
TPM3-214ENST00000466010 HELBQ8NG08 1087 aaPredicted RBP9.24□□□□□ -0.93
TPM3-214ENST00000466010 CABLES1Q8TDN4 633 aa9.24□□□□□ -0.93
TPM3-214ENST00000466010 GJD4Q96KN9 370 aaPredicted RBP9.24□□□□□ -0.93
TPM3-214ENST00000466010 PPP1R12CQ9BZL4 782 aa9.24□□□□□ -0.93
TPM3-214ENST00000466010 TMEM134Q9H6X4 195 aa9.24□□□□□ -0.93
TPM3-214ENST00000466010 DLC1Q96QB1 1528 aa9.24□□□□□ -0.93
TPM3-214ENST00000466010 PNPLA6Q8IY17 1366 aa9.24□□□□□ -0.93
TPM3-214ENST00000466010 E9PSI1 815 aa9.23□□□□□ -0.93
TPM3-214ENST00000466010 CFAP70Q5T0N1 1121 aa9.23□□□□□ -0.93
TPM3-214ENST00000466010 DCAF11Q8TEB1 546 aa9.23□□□□□ -0.93
TPM3-214ENST00000466010 LRP6O75581 1613 aa9.23□□□□□ -0.93
TPM3-214ENST00000466010 SOX11P35716 441 aa9.22□□□□□ -0.93
TPM3-214ENST00000466010 CCDC27Q2M243 656 aa9.22□□□□□ -0.93
TPM3-214ENST00000466010 NUDT18Q6ZVK8 323 aa9.22□□□□□ -0.93
TPM3-214ENST00000466010 WAPLQ7Z5K2 1190 aa9.22□□□□□ -0.93
TPM3-214ENST00000466010 PELP1Q8IZL8 1130 aaKnown RBP9.22□□□□□ -0.93
TPM3-214ENST00000466010 ORAI2Q96SN7 254 aa9.22□□□□□ -0.93
TPM3-214ENST00000466010 POGKQ9P215 609 aa9.22□□□□□ -0.93
TPM3-214ENST00000466010 KIF1AQ12756 1690 aa9.21□□□□□ -0.93
TPM3-214ENST00000466010 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
TPM3-214ENST00000466010 FDX1P10109 184 aa9.21□□□□□ -0.94
TPM3-214ENST00000466010 POTEAQ6S8J7 498 aa9.21□□□□□ -0.94
TPM3-214ENST00000466010 ADAMTS19Q8TE59 1207 aa9.21□□□□□ -0.94
TPM3-214ENST00000466010 PRAM1Q96QH2 718 aa9.21□□□□□ -0.94
TPM3-214ENST00000466010 METRNQ9UJH8 293 aa9.21□□□□□ -0.94
TPM3-214ENST00000466010 PNMA3Q9UL41 463 aa9.21□□□□□ -0.94
TPM3-214ENST00000466010 ANKARQ7Z5J8 1434 aa9.21□□□□□ -0.94
TPM3-214ENST00000466010 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.94
TPM3-214ENST00000466010 POTEFA5A3E0 1075 aa9.2□□□□□ -0.94
TPM3-214ENST00000466010 PPP1R3GB7ZBB8 358 aa9.2□□□□□ -0.94
TPM3-214ENST00000466010 NUDT7P0C024 238 aa9.2□□□□□ -0.94
TPM3-214ENST00000466010 PSME1Q06323 249 aa9.2□□□□□ -0.94
TPM3-214ENST00000466010 PPP4R3BQ5MIZ7 849 aa9.2□□□□□ -0.94
TPM3-214ENST00000466010 B4GALNT3Q6L9W6 998 aa9.2□□□□□ -0.94
TPM3-214ENST00000466010 PACS2Q86VP3 889 aa9.2□□□□□ -0.94
TPM3-214ENST00000466010 FAM198AQ9UFP1 575 aa9.2□□□□□ -0.94
TPM3-214ENST00000466010 ADGRB1O14514 1584 aa9.2□□□□□ -0.94
TPM3-214ENST00000466010 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
TPM3-214ENST00000466010 PALM3A6NDB9 673 aaPredicted RBP9.19□□□□□ -0.94
TPM3-214ENST00000466010 HOXA2O43364 376 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 FOXO3O43524 673 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 RXRBP28702 533 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
TPM3-214ENST00000466010 EVX2Q03828 476 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 VAC14Q08AM6 782 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 DOK7Q18PE1 504 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 DDX17Q92841 729 aaKnown RBP9.19□□□□□ -0.94
TPM3-214ENST00000466010 TATDN2Q93075 761 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 PLEKHH1Q9ULM0 1364 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 PXDNQ92626 1479 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 ADGRB2O60241 1585 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 COL22A1Q8NFW1 1626 aaPredicted RBP9.19□□□□□ -0.94
TPM3-214ENST00000466010 FMN2Q9NZ56 1722 aa9.19□□□□□ -0.94
TPM3-214ENST00000466010 AFF2P51816 1311 aa9.18□□□□□ -0.94
TPM3-214ENST00000466010 SRPK2P78362 688 aaKnown RBP9.18□□□□□ -0.94
TPM3-214ENST00000466010 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.94
TPM3-214ENST00000466010 NGLY1Q96IV0 654 aa9.18□□□□□ -0.94
TPM3-214ENST00000466010 C8orf37Q96NL8 207 aa9.18□□□□□ -0.94
TPM3-214ENST00000466010 TSKSQ9UJT2 592 aa9.18□□□□□ -0.94
TPM3-214ENST00000466010 IVNS1ABPQ9Y6Y0 642 aa9.18□□□□□ -0.94
TPM3-214ENST00000466010 ARHGEF10O15013 1369 aa9.17□□□□□ -0.94
TPM3-214ENST00000466010 PTPREP23469 700 aa9.17□□□□□ -0.94
TPM3-214ENST00000466010 MTMR2Q13614 643 aa9.17□□□□□ -0.94
TPM3-214ENST00000466010 PNMA1Q8ND90 353 aa9.17□□□□□ -0.94
TPM3-214ENST00000466010 TSC1Q92574 1164 aa9.17□□□□□ -0.94
TPM3-214ENST00000466010 ALG2Q9H553 416 aa9.17□□□□□ -0.94
TPM3-214ENST00000466010 VRTNQ9H8Y1 702 aa9.17□□□□□ -0.94
TPM3-214ENST00000466010 BCL2L12Q9HB09 334 aa9.17□□□□□ -0.94
TPM3-214ENST00000466010 SBNO1A3KN83 1393 aa9.16□□□□□ -0.94
TPM3-214ENST00000466010 SPATA31A3Q5VYP0 1347 aa9.16□□□□□ -0.94
TPM3-214ENST00000466010 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
TPM3-214ENST00000466010 ATG7O95352 703 aa9.16□□□□□ -0.94
TPM3-214ENST00000466010 COL9A1P20849 921 aa9.16□□□□□ -0.94
TPM3-214ENST00000466010 RBM6P78332 1123 aaKnown RBP9.16□□□□□ -0.94
TPM3-214ENST00000466010 CTDSPL2Q05D32 466 aa9.16□□□□□ -0.94
TPM3-214ENST00000466010 TRIM34Q9BYJ4 488 aa9.16□□□□□ -0.94
TPM3-214ENST00000466010 ZSWIM6Q9HCJ5 1215 aa9.16□□□□□ -0.94
TPM3-214ENST00000466010 HMX1Q9NP08 348 aaPredicted RBP9.16□□□□□ -0.94
TPM3-214ENST00000466010 TRAK1Q9UPV9 953 aa9.16□□□□□ -0.94
TPM3-214ENST00000466010 TNS3Q68CZ2 1445 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 GPRASP1Q5JY77 1395 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 KIAA1210Q9ULL0 1709 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 WASLO00401 505 aaPredicted RBP9.15□□□□□ -0.94
TPM3-214ENST00000466010 GABBR2O75899 941 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 ADAMTS2O95450 1211 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 GCGRP47871 477 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 SEMA3FQ13275 785 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 SAFB2Q14151 953 aaKnown RBP eCLIP9.15□□□□□ -0.94
TPM3-214ENST00000466010 KRT28Q7Z3Y7 464 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 ZNF428Q96B54 188 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 QTRT2Q9H974 415 aaKnown RBP9.15□□□□□ -0.94
TPM3-214ENST00000466010 USP21Q9UK80 565 aa9.15□□□□□ -0.94
TPM3-214ENST00000466010 TRPC5Q9UL62 973 aaPredicted RBP9.15□□□□□ -0.94
TPM3-214ENST00000466010 TULP4Q9NRJ4 1543 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms