RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 IL2RAP01589 272 aa6.89□□□□□ -1.31
XRN1-205ENST00000465507 TLR1Q15399 786 aa6.89□□□□□ -1.31
XRN1-205ENST00000465507 CFAP70Q5T0N1 1121 aa6.89□□□□□ -1.31
XRN1-205ENST00000465507 FOXD4L5Q5VV16 416 aaPredicted RBP6.89□□□□□ -1.31
XRN1-205ENST00000465507 LARP1Q6PKG0 1096 aaKnown RBP6.89□□□□□ -1.31
XRN1-205ENST00000465507 ERICH6Q7L0X2 663 aa6.89□□□□□ -1.31
XRN1-205ENST00000465507 CCDC155Q8N6L0 562 aa6.89□□□□□ -1.31
XRN1-205ENST00000465507 NFATC2IPQ8NCF5 419 aa6.89□□□□□ -1.31
XRN1-205ENST00000465507 VRTNQ9H8Y1 702 aa6.89□□□□□ -1.31
XRN1-205ENST00000465507 DNAAF2Q9NVR5 837 aaKnown RBP6.89□□□□□ -1.31
XRN1-205ENST00000465507 KIAA1024Q9UPX6 916 aa6.89□□□□□ -1.31
XRN1-205ENST00000465507 GNRH1P01148 92 aa6.88□□□□□ -1.31
XRN1-205ENST00000465507 GTF2E1P29083 439 aaPredicted RBP6.88□□□□□ -1.31
XRN1-205ENST00000465507 CLDN10P78369 228 aa6.88□□□□□ -1.31
XRN1-205ENST00000465507 ESCO1Q5FWF5 840 aa6.88□□□□□ -1.31
XRN1-205ENST00000465507 TBCELQ5QJ74 424 aa6.88□□□□□ -1.31
XRN1-205ENST00000465507 CCDC102BQ68D86 513 aa6.88□□□□□ -1.31
XRN1-205ENST00000465507 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
XRN1-205ENST00000465507 TRIM50Q86XT4 487 aa6.88□□□□□ -1.31
XRN1-205ENST00000465507 CNTNAP3BQ96NU0 1288 aa6.88□□□□□ -1.31
XRN1-205ENST00000465507 CNTNAP3Q9BZ76 1288 aa6.88□□□□□ -1.31
XRN1-205ENST00000465507 CHIC2Q9UKJ5 165 aa6.88□□□□□ -1.31
XRN1-205ENST00000465507 SFI1A8K8P3 1242 aa6.87□□□□□ -1.31
XRN1-205ENST00000465507 ATP1A2P50993 1020 aa6.87□□□□□ -1.31
XRN1-205ENST00000465507 CENPCQ03188 943 aa6.87□□□□□ -1.31
XRN1-205ENST00000465507 POU4F2Q12837 409 aa6.87□□□□□ -1.31
XRN1-205ENST00000465507 LYSMD3Q7Z3D4 306 aa6.87□□□□□ -1.31
XRN1-205ENST00000465507 PLEKHM2Q8IWE5 1019 aa6.87□□□□□ -1.31
XRN1-205ENST00000465507 RNF217Q8TC41 542 aa6.87□□□□□ -1.31
XRN1-205ENST00000465507 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
XRN1-205ENST00000465507 SERPINA10Q9UK55 444 aa6.87□□□□□ -1.31
XRN1-205ENST00000465507 PCDHGA11Q9Y5H2 935 aa6.87□□□□□ -1.31
XRN1-205ENST00000465507 SLC35F4A4IF30 521 aa6.86□□□□□ -1.31
XRN1-205ENST00000465507 SCNN1DP51172 638 aa6.86□□□□□ -1.31
XRN1-205ENST00000465507 CLN3Q13286 438 aa6.86□□□□□ -1.31
XRN1-205ENST00000465507 CRTC2Q53ET0 693 aaPredicted RBP6.86□□□□□ -1.31
XRN1-205ENST00000465507 GAS2L2Q8NHY3 880 aa6.86□□□□□ -1.31
XRN1-205ENST00000465507 GAS2L1Q99501 681 aaPredicted RBP6.86□□□□□ -1.31
XRN1-205ENST00000465507 ESYT1Q9BSJ8 1104 aa6.86□□□□□ -1.31
XRN1-205ENST00000465507 COL25A1Q9BXS0 654 aaPredicted RBP6.86□□□□□ -1.31
XRN1-205ENST00000465507 TMEM229AB2RXF0 380 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L15C9J2P7 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L10C9JJH3 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L13C9JLJ4 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L12C9JPN9 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L11C9JVI0 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L21D6R901 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L18D6R9N7 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L22D6RA61 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L17D6RBQ6 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L19D6RCP7 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L20D6RJB6 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 LZTS3O60299 673 aaPredicted RBP6.85□□□□□ -1.31
XRN1-205ENST00000465507 INHAP05111 366 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 USP17L24Q0WX57 530 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 RNFT1Q5M7Z0 435 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 TNS4Q8IZW8 715 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 HINFPQ9BQA5 517 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 ZNF358Q9NW07 568 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 PARP3Q9Y6F1 533 aa6.85□□□□□ -1.31
XRN1-205ENST00000465507 CDC14CA4D256 554 aa6.84□□□□□ -1.31
XRN1-205ENST00000465507 ITGA6P23229 1130 aa6.84□□□□□ -1.31
XRN1-205ENST00000465507 DPYDQ12882 1025 aa6.84□□□□□ -1.31
XRN1-205ENST00000465507 TSEN2Q8NCE0 465 aaKnown RBP6.84□□□□□ -1.31
XRN1-205ENST00000465507 NANOS1Q8WY41 292 aaKnown RBP6.84□□□□□ -1.31
XRN1-205ENST00000465507 AIDAQ96BJ3 306 aa6.84□□□□□ -1.31
XRN1-205ENST00000465507 CABP1Q9NZU7 370 aa6.84□□□□□ -1.31
XRN1-205ENST00000465507 SENP3-EIF4A1A0A087X0R7 540 aa6.83□□□□□ -1.32
XRN1-205ENST00000465507 ZBTB7BO15156 539 aaPredicted RBP6.83□□□□□ -1.32
XRN1-205ENST00000465507 PLA2G4AP47712 749 aa6.83□□□□□ -1.32
XRN1-205ENST00000465507 RNF144AP50876 292 aaPredicted RBP6.83□□□□□ -1.32
XRN1-205ENST00000465507 GNASQ5JWF2 1037 aa6.83□□□□□ -1.32
XRN1-205ENST00000465507 KANK4Q5T7N3 995 aaPredicted RBP6.83□□□□□ -1.32
XRN1-205ENST00000465507 RIPOR1Q6ZS17 1223 aa6.83□□□□□ -1.32
XRN1-205ENST00000465507 VWA5B2Q8N398 1253 aa6.83□□□□□ -1.32
XRN1-205ENST00000465507 CHMP7Q8WUX9 453 aaPredicted RBP6.83□□□□□ -1.32
XRN1-205ENST00000465507 XAGE2Q96GT9 111 aa6.83□□□□□ -1.32
XRN1-205ENST00000465507 GPAMQ9HCL2 828 aa6.83□□□□□ -1.32
XRN1-205ENST00000465507 NOVA2Q9UNW9 492 aaKnown RBP6.82□□□□□ -1.32
XRN1-205ENST00000465507 USP3Q9Y6I4 520 aa6.82□□□□□ -1.32
XRN1-205ENST00000465507 BACH1O14867 736 aa6.81□□□□□ -1.32
XRN1-205ENST00000465507 GSK3AP49840 483 aa6.81□□□□□ -1.32
XRN1-205ENST00000465507 SMTNP53814 917 aa6.81□□□□□ -1.32
XRN1-205ENST00000465507 TAS1R3Q7RTX0 852 aa6.81□□□□□ -1.32
XRN1-205ENST00000465507 LARGE2Q8N3Y3 721 aa6.81□□□□□ -1.32
XRN1-205ENST00000465507 TIMMDC1Q9NPL8 285 aa6.81□□□□□ -1.32
XRN1-205ENST00000465507 ZNF232Q9UNY5 417 aa6.81□□□□□ -1.32
XRN1-205ENST00000465507 A6NJY4 79 aa6.8□□□□□ -1.32
XRN1-205ENST00000465507 WASLO00401 505 aaPredicted RBP6.8□□□□□ -1.32
XRN1-205ENST00000465507 SEC13P55735 322 aa6.8□□□□□ -1.32
XRN1-205ENST00000465507 PTK7Q13308 1070 aa6.8□□□□□ -1.32
XRN1-205ENST00000465507 C4orf17Q53FE4 359 aa6.8□□□□□ -1.32
XRN1-205ENST00000465507 ZNF385CQ66K41 422 aaPredicted RBP6.8□□□□□ -1.32
XRN1-205ENST00000465507 SV2AQ7L0J3 742 aa6.8□□□□□ -1.32
XRN1-205ENST00000465507 ANKMY2Q8IV38 441 aa6.8□□□□□ -1.32
XRN1-205ENST00000465507 WHAMMQ8TF30 809 aa6.8□□□□□ -1.32
XRN1-205ENST00000465507 GRIP2Q9C0E4 1043 aa6.8□□□□□ -1.32
XRN1-205ENST00000465507 GPC1P35052 558 aa6.79□□□□□ -1.32
XRN1-205ENST00000465507 NBPF10Q6P3W6 841 aaKnown RBP6.79□□□□□ -1.32
XRN1-205ENST00000465507 SLC9A9Q8IVB4 645 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms