RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ZSCAN10Q96SZ4 725 aaPredicted RBP10.36□□□□□ -0.75
UBR4-209ENST00000465036 RAB6BQ9NRW1 208 aa10.36□□□□□ -0.75
UBR4-209ENST00000465036 LOC100996750A0A140TA64 210 aa10.35□□□□□ -0.75
UBR4-209ENST00000465036 MX2P20592 715 aa10.35□□□□□ -0.75
UBR4-209ENST00000465036 IRF5Q13568 498 aa10.35□□□□□ -0.75
UBR4-209ENST00000465036 KRTAP4-6Q9BYQ5 205 aa10.35□□□□□ -0.75
UBR4-209ENST00000465036 SUZ12Q15022 739 aaKnown RBP10.34□□□□□ -0.75
UBR4-209ENST00000465036 ACDQ96AP0 544 aa10.34□□□□□ -0.75
UBR4-209ENST00000465036 PHF20L1A8MW92 1017 aa10.33□□□□□ -0.76
UBR4-209ENST00000465036 MAP2K3P46734 347 aa10.33□□□□□ -0.76
UBR4-209ENST00000465036 GNASQ5JWF2 1037 aa10.33□□□□□ -0.76
UBR4-209ENST00000465036 SIRT1Q96EB6 747 aa10.33□□□□□ -0.76
UBR4-209ENST00000465036 THBS1P07996 1170 aa10.32□□□□□ -0.76
UBR4-209ENST00000465036 GTF2E1P29083 439 aaPredicted RBP10.32□□□□□ -0.76
UBR4-209ENST00000465036 SLFNL1Q499Z3 407 aa10.32□□□□□ -0.76
UBR4-209ENST00000465036 BEND7Q8N7W2 519 aaPredicted RBP10.32□□□□□ -0.76
UBR4-209ENST00000465036 DOLKQ9UPQ8 538 aa10.32□□□□□ -0.76
UBR4-209ENST00000465036 PHF24Q9UPV7 400 aa10.32□□□□□ -0.76
UBR4-209ENST00000465036 OIP5O43482 229 aa10.3□□□□□ -0.76
UBR4-209ENST00000465036 UBAP2LQ14157 1087 aaKnown RBP10.3□□□□□ -0.76
UBR4-209ENST00000465036 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
UBR4-209ENST00000465036 TMEM214Q6NUQ4 689 aaKnown RBP10.3□□□□□ -0.76
UBR4-209ENST00000465036 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
UBR4-209ENST00000465036 RHBDD1Q8TEB9 315 aa10.3□□□□□ -0.76
UBR4-209ENST00000465036 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
UBR4-209ENST00000465036 C4orf17Q53FE4 359 aa10.29□□□□□ -0.76
UBR4-209ENST00000465036 RNF135Q8IUD6 432 aa10.29□□□□□ -0.76
UBR4-209ENST00000465036 WASHC4Q2M389 1173 aa10.28□□□□□ -0.76
UBR4-209ENST00000465036 MAP7D1Q3KQU3 841 aa10.28□□□□□ -0.76
UBR4-209ENST00000465036 PODNQ7Z5L7 613 aa10.28□□□□□ -0.76
UBR4-209ENST00000465036 NEDD1Q8NHV4 660 aa10.28□□□□□ -0.76
UBR4-209ENST00000465036 OXCT2Q9BYC2 517 aaPredicted RBP10.28□□□□□ -0.76
UBR4-209ENST00000465036 ETNK1Q9HBU6 452 aa10.28□□□□□ -0.76
UBR4-209ENST00000465036 CSB-PGBD3P0DP91 1061 aa10.27□□□□□ -0.77
UBR4-209ENST00000465036 PHKA2P46019 1235 aa10.27□□□□□ -0.77
UBR4-209ENST00000465036 GPAT2Q6NUI2 795 aa10.27□□□□□ -0.77
UBR4-209ENST00000465036 PGBD3Q8N328 593 aa10.27□□□□□ -0.77
UBR4-209ENST00000465036 CRISPLD1Q9H336 500 aa10.27□□□□□ -0.77
UBR4-209ENST00000465036 GPAMQ9HCL2 828 aa10.27□□□□□ -0.77
UBR4-209ENST00000465036 CNTNAP5Q8WYK1 1306 aa10.27□□□□□ -0.77
UBR4-209ENST00000465036 MSX1P28360 303 aa10.26□□□□□ -0.77
UBR4-209ENST00000465036 SOX11P35716 441 aa10.26□□□□□ -0.77
UBR4-209ENST00000465036 GDF2Q9UK05 429 aaPredicted RBP10.26□□□□□ -0.77
UBR4-209ENST00000465036 ATXN7L1Q9ULK2 861 aaPredicted RBP10.26□□□□□ -0.77
UBR4-209ENST00000465036 EFHC2Q5JST6 749 aa10.25□□□□□ -0.77
UBR4-209ENST00000465036 C1orf216Q8TAB5 229 aa10.25□□□□□ -0.77
UBR4-209ENST00000465036 INHAP05111 366 aa10.24□□□□□ -0.77
UBR4-209ENST00000465036 VAC14Q08AM6 782 aa10.24□□□□□ -0.77
UBR4-209ENST00000465036 TLR1Q15399 786 aa10.24□□□□□ -0.77
UBR4-209ENST00000465036 KLRG1Q96E93 195 aa10.24□□□□□ -0.77
UBR4-209ENST00000465036 DCAF5Q96JK2 942 aa10.24□□□□□ -0.77
UBR4-209ENST00000465036 NDFIP2Q9NV92 336 aa10.24□□□□□ -0.77
UBR4-209ENST00000465036 SCNN1DP51172 638 aa10.23□□□□□ -0.77
UBR4-209ENST00000465036 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
UBR4-209ENST00000465036 RUBCNLQ9H714 662 aa10.23□□□□□ -0.77
UBR4-209ENST00000465036 GDPD2Q9HCC8 539 aa10.23□□□□□ -0.77
UBR4-209ENST00000465036 GOLGA6L1Q8N7Z2 621 aa10.22□□□□□ -0.77
UBR4-209ENST00000465036 FIGNL1Q6PIW4 674 aa10.21□□□□□ -0.77
UBR4-209ENST00000465036 PLPP7Q8NBV4 271 aa10.21□□□□□ -0.77
UBR4-209ENST00000465036 GDF10P55107 478 aa10.2□□□□□ -0.78
UBR4-209ENST00000465036 SEMA3FQ13275 785 aa10.2□□□□□ -0.78
UBR4-209ENST00000465036 PLA2G4EQ3MJ16 856 aa10.2□□□□□ -0.78
UBR4-209ENST00000465036 ALYREFQ86V81 257 aaKnown RBP10.2□□□□□ -0.78
UBR4-209ENST00000465036 SLC4A9Q96Q91 983 aa10.2□□□□□ -0.78
UBR4-209ENST00000465036 STAU1O95793 577 aaKnown RBP10.19□□□□□ -0.78
UBR4-209ENST00000465036 ABL2P42684 1182 aa10.19□□□□□ -0.78
UBR4-209ENST00000465036 SMTNP53814 917 aa10.19□□□□□ -0.78
UBR4-209ENST00000465036 TBC1D9Q6ZT07 1266 aa10.19□□□□□ -0.78
UBR4-209ENST00000465036 NLRP8Q86W28 1048 aa10.19□□□□□ -0.78
UBR4-209ENST00000465036 GALNT6Q8NCL4 622 aa10.19□□□□□ -0.78
UBR4-209ENST00000465036 NIFKQ9BYG3 293 aaKnown RBP10.19□□□□□ -0.78
UBR4-209ENST00000465036 SHISA8B8ZZ34 492 aa10.18□□□□□ -0.78
UBR4-209ENST00000465036 BNIP3LO60238 219 aa10.18□□□□□ -0.78
UBR4-209ENST00000465036 MCM6Q14566 821 aa10.18□□□□□ -0.78
UBR4-209ENST00000465036 C1orf229Q6ZS94 237 aaPredicted RBP10.18□□□□□ -0.78
UBR4-209ENST00000465036 EDARADDQ8WWZ3 215 aa10.18□□□□□ -0.78
UBR4-209ENST00000465036 DNAAF2Q9NVR5 837 aaKnown RBP10.18□□□□□ -0.78
UBR4-209ENST00000465036 MKL2Q9ULH7 1088 aa10.18□□□□□ -0.78
UBR4-209ENST00000465036 MSTNO14793 375 aa10.17□□□□□ -0.78
UBR4-209ENST00000465036 FGFR3P22607 806 aa10.17□□□□□ -0.78
UBR4-209ENST00000465036 MTFR1Q15390 333 aa10.17□□□□□ -0.78
UBR4-209ENST00000465036 SLCO4C1Q6ZQN7 724 aa10.17□□□□□ -0.78
UBR4-209ENST00000465036 ZNF295-AS1Q8N0V1 137 aa10.17□□□□□ -0.78
UBR4-209ENST00000465036 PCDHGC4Q9Y5F7 938 aa10.17□□□□□ -0.78
UBR4-209ENST00000465036 CDK2AP1O14519 115 aa10.16□□□□□ -0.78
UBR4-209ENST00000465036 C2CD2LO14523 706 aa10.16□□□□□ -0.78
UBR4-209ENST00000465036 LZTS3O60299 673 aaPredicted RBP10.16□□□□□ -0.78
UBR4-209ENST00000465036 ITGB2P05107 769 aa10.16□□□□□ -0.78
UBR4-209ENST00000465036 BMP4P12644 408 aa10.16□□□□□ -0.78
UBR4-209ENST00000465036 ATP4AP20648 1035 aa10.16□□□□□ -0.78
UBR4-209ENST00000465036 PLA2G4AP47712 749 aa10.16□□□□□ -0.78
UBR4-209ENST00000465036 SNRPNP63162 240 aaKnown RBP10.16□□□□□ -0.78
UBR4-209ENST00000465036 ABHD17AQ96GS6 310 aa10.16□□□□□ -0.78
UBR4-209ENST00000465036 TMEM229AB2RXF0 380 aa10.15□□□□□ -0.78
UBR4-209ENST00000465036 ARAFP10398 606 aa10.15□□□□□ -0.78
UBR4-209ENST00000465036 ZDHHC3Q9NYG2 299 aa10.15□□□□□ -0.78
UBR4-209ENST00000465036 IQSEC3Q9UPP2 1182 aaPredicted RBP10.15□□□□□ -0.78
UBR4-209ENST00000465036 CTBSQ01459 385 aa10.14□□□□□ -0.79
UBR4-209ENST00000465036 FAM182BQ5T319 152 aa10.14□□□□□ -0.79
UBR4-209ENST00000465036 NFATC2IPQ8NCF5 419 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms