RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 RBM25P49756 843 aaKnown RBP9.89□□□□□ -0.83
KPNA1-202ENST00000464940 KANK3Q6NY19 840 aa9.89□□□□□ -0.83
KPNA1-202ENST00000464940 VWA5B2Q8N398 1253 aa9.89□□□□□ -0.83
KPNA1-202ENST00000464940 WHAMMQ8TF30 809 aa9.89□□□□□ -0.83
KPNA1-202ENST00000464940 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
KPNA1-202ENST00000464940 SOX11P35716 441 aa9.88□□□□□ -0.83
KPNA1-202ENST00000464940 MARSP56192 900 aaKnown RBP9.88□□□□□ -0.83
KPNA1-202ENST00000464940 NBPF20Q3BBV1 942 aa9.88□□□□□ -0.83
KPNA1-202ENST00000464940 SV2AQ7L0J3 742 aa9.88□□□□□ -0.83
KPNA1-202ENST00000464940 CDC14CA4D256 554 aa9.87□□□□□ -0.83
KPNA1-202ENST00000464940 ESPNB1AK53 854 aa9.87□□□□□ -0.83
KPNA1-202ENST00000464940 FOXK2Q01167 660 aa9.87□□□□□ -0.83
KPNA1-202ENST00000464940 ALG2Q9H553 416 aa9.87□□□□□ -0.83
KPNA1-202ENST00000464940 RSF1Q96T23 1441 aaPredicted RBP9.87□□□□□ -0.83
KPNA1-202ENST00000464940 CFTRP13569 1480 aa9.86□□□□□ -0.83
KPNA1-202ENST00000464940 PALM3A6NDB9 673 aaPredicted RBP9.86□□□□□ -0.83
KPNA1-202ENST00000464940 PRDM2Q13029 1718 aa9.86□□□□□ -0.83
KPNA1-202ENST00000464940 SCARF2Q96GP6 870 aaPredicted RBP9.86□□□□□ -0.83
KPNA1-202ENST00000464940 CEP126Q9P2H0 1117 aa9.86□□□□□ -0.83
KPNA1-202ENST00000464940 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
KPNA1-202ENST00000464940 LMOD1P29536 600 aaPredicted RBP9.85□□□□□ -0.83
KPNA1-202ENST00000464940 SEMA3FQ13275 785 aa9.85□□□□□ -0.83
KPNA1-202ENST00000464940 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
KPNA1-202ENST00000464940 SEPT12Q8IYM1 358 aa9.85□□□□□ -0.83
KPNA1-202ENST00000464940 E9PSI1 815 aa9.84□□□□□ -0.83
KPNA1-202ENST00000464940 GIGYF1O75420 1035 aaPredicted RBP9.84□□□□□ -0.83
KPNA1-202ENST00000464940 DHX9Q08211 1270 aaKnown RBP9.84□□□□□ -0.83
KPNA1-202ENST00000464940 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
KPNA1-202ENST00000464940 CTSOP43234 321 aaPredicted RBP9.83□□□□□ -0.84
KPNA1-202ENST00000464940 RNF20Q5VTR2 975 aa9.83□□□□□ -0.84
KPNA1-202ENST00000464940 TFIP11Q9UBB9 837 aaKnown RBP9.83□□□□□ -0.84
KPNA1-202ENST00000464940 INTS6LQ5JSJ4 861 aaKnown RBP9.82□□□□□ -0.84
KPNA1-202ENST00000464940 PHTF2Q8N3S3 785 aa9.82□□□□□ -0.84
KPNA1-202ENST00000464940 ZNF428Q96B54 188 aa9.82□□□□□ -0.84
KPNA1-202ENST00000464940 ATG7O95352 703 aa9.81□□□□□ -0.84
KPNA1-202ENST00000464940 ADAMTS2O95450 1211 aa9.81□□□□□ -0.84
KPNA1-202ENST00000464940 CCDC27Q2M243 656 aa9.81□□□□□ -0.84
KPNA1-202ENST00000464940 AGBL1Q96MI9 1066 aa9.81□□□□□ -0.84
KPNA1-202ENST00000464940 CARNS1A5YM72 827 aa9.8□□□□□ -0.84
KPNA1-202ENST00000464940 RELBQ01201 579 aa9.8□□□□□ -0.84
KPNA1-202ENST00000464940 INSM2Q96T92 566 aaPredicted RBP9.8□□□□□ -0.84
KPNA1-202ENST00000464940 POLMQ9NP87 494 aaPredicted RBP9.8□□□□□ -0.84
KPNA1-202ENST00000464940 AMOTL2Q9Y2J4 779 aa9.8□□□□□ -0.84
KPNA1-202ENST00000464940 IVNS1ABPQ9Y6Y0 642 aa9.8□□□□□ -0.84
KPNA1-202ENST00000464940 MAP3K10Q02779 954 aa9.79□□□□□ -0.84
KPNA1-202ENST00000464940 SRSF11Q05519 484 aaKnown RBP9.79□□□□□ -0.84
KPNA1-202ENST00000464940 LYPD4Q6UWN0 246 aa9.79□□□□□ -0.84
KPNA1-202ENST00000464940 RNF217Q8TC41 542 aa9.79□□□□□ -0.84
KPNA1-202ENST00000464940 SENP3-EIF4A1A0A087X0R7 540 aa9.78□□□□□ -0.84
KPNA1-202ENST00000464940 ERVH48-1M5A8F1 160 aa9.78□□□□□ -0.84
KPNA1-202ENST00000464940 SND1Q7KZF4 910 aaKnown RBP eCLIP9.78□□□□□ -0.84
KPNA1-202ENST00000464940 TRIM52Q96A61 297 aa9.78□□□□□ -0.84
KPNA1-202ENST00000464940 URB2Q14146 1524 aaKnown RBP9.77□□□□□ -0.84
KPNA1-202ENST00000464940 SLFNL1Q499Z3 407 aa9.77□□□□□ -0.85
KPNA1-202ENST00000464940 CDCA8Q53HL2 280 aa9.77□□□□□ -0.85
KPNA1-202ENST00000464940 UCN2Q96RP3 112 aa9.77□□□□□ -0.85
KPNA1-202ENST00000464940 CHIC2Q9UKJ5 165 aa9.77□□□□□ -0.85
KPNA1-202ENST00000464940 TMEM88BA6NKF7 163 aa9.76□□□□□ -0.85
KPNA1-202ENST00000464940 RAB15P59190 212 aa9.76□□□□□ -0.85
KPNA1-202ENST00000464940 ZNF395Q9H8N7 513 aaPredicted RBP9.76□□□□□ -0.85
KPNA1-202ENST00000464940 MAFBQ9Y5Q3 323 aaPredicted RBP9.76□□□□□ -0.85
KPNA1-202ENST00000464940 CELA2BP08218 269 aaPredicted RBP9.75□□□□□ -0.85
KPNA1-202ENST00000464940 B4GALNT3Q6L9W6 998 aa9.75□□□□□ -0.85
KPNA1-202ENST00000464940 ENAMQ9NRM1 1142 aa9.75□□□□□ -0.85
KPNA1-202ENST00000464940 TMPRSS4Q9NRS4 437 aa9.75□□□□□ -0.85
KPNA1-202ENST00000464940 MAP7D1Q3KQU3 841 aa9.73□□□□□ -0.85
KPNA1-202ENST00000464940 TSGA10IPQ3SY00 556 aa9.73□□□□□ -0.85
KPNA1-202ENST00000464940 RNF135Q8IUD6 432 aa9.73□□□□□ -0.85
KPNA1-202ENST00000464940 NFATC2IPQ8NCF5 419 aa9.73□□□□□ -0.85
KPNA1-202ENST00000464940 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
KPNA1-202ENST00000464940 CCDC88BA6NC98 1476 aa9.72□□□□□ -0.85
KPNA1-202ENST00000464940 LILRA1O75019 489 aa9.72□□□□□ -0.85
KPNA1-202ENST00000464940 GAS6Q14393 721 aa9.72□□□□□ -0.85
KPNA1-202ENST00000464940 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
KPNA1-202ENST00000464940 ZNF784Q8NCA9 323 aaPredicted RBP9.72□□□□□ -0.85
KPNA1-202ENST00000464940 GNEQ9Y223 722 aaKnown RBP9.72□□□□□ -0.85
KPNA1-202ENST00000464940 MSTNO14793 375 aa9.71□□□□□ -0.86
KPNA1-202ENST00000464940 ATP9BO43861 1147 aa9.71□□□□□ -0.86
KPNA1-202ENST00000464940 ADH1AP07327 375 aa9.71□□□□□ -0.86
KPNA1-202ENST00000464940 PCDHB11Q9Y5F2 797 aa9.71□□□□□ -0.86
KPNA1-202ENST00000464940 PHF20L1A8MW92 1017 aa9.7□□□□□ -0.86
KPNA1-202ENST00000464940 LZTS3O60299 673 aaPredicted RBP9.7□□□□□ -0.86
KPNA1-202ENST00000464940 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
KPNA1-202ENST00000464940 ERVK-9P63128 1117 aa9.7□□□□□ -0.86
KPNA1-202ENST00000464940 PLA2G4EQ3MJ16 856 aa9.7□□□□□ -0.86
KPNA1-202ENST00000464940 LYSMD3Q7Z3D4 306 aa9.7□□□□□ -0.86
KPNA1-202ENST00000464940 CDCA7Q9BWT1 371 aaPredicted RBP9.7□□□□□ -0.86
KPNA1-202ENST00000464940 PIK3CDO00329 1044 aa9.69□□□□□ -0.86
KPNA1-202ENST00000464940 USP4Q13107 963 aa9.69□□□□□ -0.86
KPNA1-202ENST00000464940 XP32Q5T750 250 aa9.69□□□□□ -0.86
KPNA1-202ENST00000464940 CC2D2BQ6DHV5 1058 aa9.69□□□□□ -0.86
KPNA1-202ENST00000464940 PLPP7Q8NBV4 271 aa9.69□□□□□ -0.86
KPNA1-202ENST00000464940 IFT140Q96RY7 1462 aa9.69□□□□□ -0.86
KPNA1-202ENST00000464940 CUEDC1Q9NWM3 386 aaPredicted RBP9.69□□□□□ -0.86
KPNA1-202ENST00000464940 ABCC8Q09428 1581 aa9.68□□□□□ -0.86
KPNA1-202ENST00000464940 ADAM23O75077 832 aa9.68□□□□□ -0.86
KPNA1-202ENST00000464940 SKIP12755 728 aa9.68□□□□□ -0.86
KPNA1-202ENST00000464940 PTGIRP43119 386 aa9.68□□□□□ -0.86
KPNA1-202ENST00000464940 ELOAQ14241 798 aaKnown RBP9.68□□□□□ -0.86
KPNA1-202ENST00000464940 DCAF5Q96JK2 942 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms