RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 NBPF11Q86T75 865 aa3.96□□□□□ -1.78
TMEM56-204ENST00000463375 RNF135Q8IUD6 432 aa3.96□□□□□ -1.78
TMEM56-204ENST00000463375 C2CD2LO14523 706 aa3.95□□□□□ -1.78
TMEM56-204ENST00000463375 ZMYND10O75800 440 aa3.95□□□□□ -1.78
TMEM56-204ENST00000463375 BMP4P12644 408 aa3.95□□□□□ -1.78
TMEM56-204ENST00000463375 LRP8Q14114 963 aa3.95□□□□□ -1.78
TMEM56-204ENST00000463375 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
TMEM56-204ENST00000463375 LRRN4Q8WUT4 740 aa3.95□□□□□ -1.78
TMEM56-204ENST00000463375 NDFIP2Q9NV92 336 aa3.95□□□□□ -1.78
TMEM56-204ENST00000463375 A0A1B0GTH6 734 aa3.94□□□□□ -1.78
TMEM56-204ENST00000463375 CLK2P49760 499 aaKnown RBP3.94□□□□□ -1.78
TMEM56-204ENST00000463375 ERVK-9P63128 1117 aa3.94□□□□□ -1.78
TMEM56-204ENST00000463375 NR6A1Q15406 480 aa3.94□□□□□ -1.78
TMEM56-204ENST00000463375 CHSY3Q70JA7 882 aa3.94□□□□□ -1.78
TMEM56-204ENST00000463375 DZIP3Q86Y13 1208 aaKnown RBP3.94□□□□□ -1.78
TMEM56-204ENST00000463375 CCDC125Q86Z20 511 aa3.94□□□□□ -1.78
TMEM56-204ENST00000463375 TRIM11Q96F44 468 aa3.94□□□□□ -1.78
TMEM56-204ENST00000463375 NLRP3Q96P20 1036 aa3.94□□□□□ -1.78
TMEM56-204ENST00000463375 TPSG1Q9NRR2 321 aa3.94□□□□□ -1.78
TMEM56-204ENST00000463375 FGFR3P22607 806 aa3.93□□□□□ -1.78
TMEM56-204ENST00000463375 PRSS36Q5K4E3 855 aa3.93□□□□□ -1.78
TMEM56-204ENST00000463375 CYP2U1Q7Z449 544 aa3.93□□□□□ -1.78
TMEM56-204ENST00000463375 GPAMQ9HCL2 828 aa3.93□□□□□ -1.78
TMEM56-204ENST00000463375 CC2D2BQ6DHV5 1058 aa3.92□□□□□ -1.78
TMEM56-204ENST00000463375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.92□□□□□ -1.78
TMEM56-204ENST00000463375 PNMA1Q8ND90 353 aa3.92□□□□□ -1.78
TMEM56-204ENST00000463375 ABHD17AQ96GS6 310 aa3.92□□□□□ -1.78
TMEM56-204ENST00000463375 AVENQ9NQS1 362 aaPredicted RBP3.92□□□□□ -1.78
TMEM56-204ENST00000463375 NEURL1BA8MQ27 555 aa3.91□□□□□ -1.78
TMEM56-204ENST00000463375 TRIM66O15016 1216 aa3.91□□□□□ -1.78
TMEM56-204ENST00000463375 BNIP3LO60238 219 aa3.91□□□□□ -1.78
TMEM56-204ENST00000463375 CTBSQ01459 385 aa3.91□□□□□ -1.78
TMEM56-204ENST00000463375 EFHC2Q5JST6 749 aa3.91□□□□□ -1.78
TMEM56-204ENST00000463375 TRAK2O60296 914 aa3.9□□□□□ -1.79
TMEM56-204ENST00000463375 CSB-PGBD3P0DP91 1061 aa3.9□□□□□ -1.79
TMEM56-204ENST00000463375 ADH6P28332 368 aa3.9□□□□□ -1.79
TMEM56-204ENST00000463375 MCTP1Q6DN14 999 aa3.9□□□□□ -1.79
TMEM56-204ENST00000463375 PGBD3Q8N328 593 aa3.9□□□□□ -1.79
TMEM56-204ENST00000463375 PLVAPQ9BX97 442 aa3.9□□□□□ -1.79
TMEM56-204ENST00000463375 CRISPLD1Q9H336 500 aa3.9□□□□□ -1.79
TMEM56-204ENST00000463375 ARHGEF10LQ9HCE6 1279 aa3.9□□□□□ -1.79
TMEM56-204ENST00000463375 SPDYE3A6NKU9 549 aa3.89□□□□□ -1.79
TMEM56-204ENST00000463375 HYAL3O43820 417 aaPredicted RBP3.89□□□□□ -1.79
TMEM56-204ENST00000463375 H2AFB1P0C5Y9 115 aa3.89□□□□□ -1.79
TMEM56-204ENST00000463375 H2AFB2P0C5Z0 115 aa3.89□□□□□ -1.79
TMEM56-204ENST00000463375 PLCB2Q00722 1185 aa3.89□□□□□ -1.79
TMEM56-204ENST00000463375 FAM182BQ5T319 152 aa3.89□□□□□ -1.79
TMEM56-204ENST00000463375 FCHSD1Q86WN1 690 aa3.89□□□□□ -1.79
TMEM56-204ENST00000463375 RUBCNLQ9H714 662 aa3.89□□□□□ -1.79
TMEM56-204ENST00000463375 HRH3Q9Y5N1 445 aa3.89□□□□□ -1.79
TMEM56-204ENST00000463375 GIGYF1O75420 1035 aaPredicted RBP3.88□□□□□ -1.79
TMEM56-204ENST00000463375 MSX1P28360 303 aa3.88□□□□□ -1.79
TMEM56-204ENST00000463375 SCTRP47872 440 aa3.88□□□□□ -1.79
TMEM56-204ENST00000463375 PRRT3Q5FWE3 981 aa3.88□□□□□ -1.79
TMEM56-204ENST00000463375 FIGNL1Q6PIW4 674 aa3.88□□□□□ -1.79
TMEM56-204ENST00000463375 EPS8L1Q8TE68 723 aa3.88□□□□□ -1.79
TMEM56-204ENST00000463375 ESYT1Q9BSJ8 1104 aa3.88□□□□□ -1.79
TMEM56-204ENST00000463375 RSPH6AQ9H0K4 717 aa3.88□□□□□ -1.79
TMEM56-204ENST00000463375 OSBPL3Q9H4L5 887 aa3.88□□□□□ -1.79
TMEM56-204ENST00000463375 DNAAF2Q9NVR5 837 aaKnown RBP3.88□□□□□ -1.79
TMEM56-204ENST00000463375 KLF15Q9UIH9 416 aa3.88□□□□□ -1.79
TMEM56-204ENST00000463375 APBA3O96018 575 aa3.87□□□□□ -1.79
TMEM56-204ENST00000463375 GNRH1P01148 92 aa3.87□□□□□ -1.79
TMEM56-204ENST00000463375 IL2RAP01589 272 aa3.87□□□□□ -1.79
TMEM56-204ENST00000463375 C4orf17Q53FE4 359 aa3.87□□□□□ -1.79
TMEM56-204ENST00000463375 GNASQ5JWF2 1037 aa3.87□□□□□ -1.79
TMEM56-204ENST00000463375 ZC3H15Q8WU90 426 aaKnown RBP3.87□□□□□ -1.79
TMEM56-204ENST00000463375 CNKSR1Q969H4 720 aa3.87□□□□□ -1.79
TMEM56-204ENST00000463375 FMNL2Q96PY5 1086 aa3.87□□□□□ -1.79
TMEM56-204ENST00000463375 NACC1Q96RE7 527 aa3.87□□□□□ -1.79
TMEM56-204ENST00000463375 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
TMEM56-204ENST00000463375 FHDC1Q9C0D6 1143 aaPredicted RBP3.87□□□□□ -1.79
TMEM56-204ENST00000463375 COBLO75128 1261 aa3.86□□□□□ -1.79
TMEM56-204ENST00000463375 YBX3P16989 372 aaKnown RBP eCLIP3.86□□□□□ -1.79
TMEM56-204ENST00000463375 PHKA2P46019 1235 aa3.86□□□□□ -1.79
TMEM56-204ENST00000463375 CENPCQ03188 943 aa3.86□□□□□ -1.79
TMEM56-204ENST00000463375 RNF20Q5VTR2 975 aa3.86□□□□□ -1.79
TMEM56-204ENST00000463375 FBXO31Q5XUX0 539 aaPredicted RBP3.86□□□□□ -1.79
TMEM56-204ENST00000463375 ZSCAN10Q96SZ4 725 aaPredicted RBP3.86□□□□□ -1.79
TMEM56-204ENST00000463375 MDFIQ99750 246 aa3.86□□□□□ -1.79
TMEM56-204ENST00000463375 HMX1Q9NP08 348 aaPredicted RBP3.86□□□□□ -1.79
TMEM56-204ENST00000463375 HCN2Q9UL51 889 aa3.86□□□□□ -1.79
TMEM56-204ENST00000463375 PCDHGC4Q9Y5F7 938 aa3.86□□□□□ -1.79
TMEM56-204ENST00000463375 COL17A1Q9UMD9 1497 aaPredicted RBP3.86□□□□□ -1.79
TMEM56-204ENST00000463375 PAX4O43316 350 aa3.85□□□□□ -1.79
TMEM56-204ENST00000463375 TXKP42681 527 aa3.85□□□□□ -1.79
TMEM56-204ENST00000463375 ZNF468Q5VIY5 522 aaPredicted RBP3.85□□□□□ -1.79
TMEM56-204ENST00000463375 NLRP8Q86W28 1048 aa3.85□□□□□ -1.79
TMEM56-204ENST00000463375 AK7Q96M32 723 aa3.85□□□□□ -1.79
TMEM56-204ENST00000463375 PRDM6Q9NQX0 595 aa3.85□□□□□ -1.79
TMEM56-204ENST00000463375 RAB6BQ9NRW1 208 aa3.85□□□□□ -1.79
TMEM56-204ENST00000463375 POLR3EQ9NVU0 708 aa3.85□□□□□ -1.79
TMEM56-204ENST00000463375 ZBBXA8MT70 800 aa3.84□□□□□ -1.79
TMEM56-204ENST00000463375 ATP4AP20648 1035 aa3.84□□□□□ -1.79
TMEM56-204ENST00000463375 COL9A3Q14050 684 aaPredicted RBP3.84□□□□□ -1.79
TMEM56-204ENST00000463375 C1orf216Q8TAB5 229 aa3.84□□□□□ -1.79
TMEM56-204ENST00000463375 RHBDD1Q8TEB9 315 aa3.84□□□□□ -1.79
TMEM56-204ENST00000463375 XAGE2Q96GT9 111 aa3.84□□□□□ -1.79
TMEM56-204ENST00000463375 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.84□□□□□ -1.79
TMEM56-204ENST00000463375 ZCCHC2Q9C0B9 1178 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms