RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 PLVAPQ9BX97 442 aa6.87□□□□□ -1.31
NDUFA4-202ENST00000463308 GRIP2Q9C0E4 1043 aa6.87□□□□□ -1.31
NDUFA4-202ENST00000463308 WASLO00401 505 aaPredicted RBP6.86□□□□□ -1.31
NDUFA4-202ENST00000463308 H2AFB1P0C5Y9 115 aa6.86□□□□□ -1.31
NDUFA4-202ENST00000463308 H2AFB2P0C5Z0 115 aa6.86□□□□□ -1.31
NDUFA4-202ENST00000463308 FZD5Q13467 585 aa6.86□□□□□ -1.31
NDUFA4-202ENST00000463308 CSPP1Q1MSJ5 1256 aa6.86□□□□□ -1.31
NDUFA4-202ENST00000463308 SEPT12Q8IYM1 358 aa6.86□□□□□ -1.31
NDUFA4-202ENST00000463308 A0A1W2PRU2 124 aa6.85□□□□□ -1.31
NDUFA4-202ENST00000463308 C2CD2LO14523 706 aa6.85□□□□□ -1.31
NDUFA4-202ENST00000463308 PRRT3Q5FWE3 981 aa6.85□□□□□ -1.31
NDUFA4-202ENST00000463308 TRIM11Q96F44 468 aa6.85□□□□□ -1.31
NDUFA4-202ENST00000463308 ESPNB1AK53 854 aa6.84□□□□□ -1.31
NDUFA4-202ENST00000463308 FGFR3P22607 806 aa6.84□□□□□ -1.31
NDUFA4-202ENST00000463308 UBAP2LQ14157 1087 aaKnown RBP6.84□□□□□ -1.31
NDUFA4-202ENST00000463308 PPP2R2DQ66LE6 453 aa6.84□□□□□ -1.31
NDUFA4-202ENST00000463308 ADAM32Q8TC27 787 aa6.84□□□□□ -1.31
NDUFA4-202ENST00000463308 CYLDQ9NQC7 956 aa6.84□□□□□ -1.31
NDUFA4-202ENST00000463308 A0A1B0GTH6 734 aa6.83□□□□□ -1.32
NDUFA4-202ENST00000463308 LILRB3O75022 631 aa6.83□□□□□ -1.32
NDUFA4-202ENST00000463308 PLCB2Q00722 1185 aa6.83□□□□□ -1.32
NDUFA4-202ENST00000463308 AMHR2Q16671 573 aa6.83□□□□□ -1.32
NDUFA4-202ENST00000463308 NACC1Q96RE7 527 aa6.83□□□□□ -1.32
NDUFA4-202ENST00000463308 NEURL1BA8MQ27 555 aa6.82□□□□□ -1.32
NDUFA4-202ENST00000463308 CSB-PGBD3P0DP91 1061 aa6.82□□□□□ -1.32
NDUFA4-202ENST00000463308 ELNP15502 786 aa6.82□□□□□ -1.32
NDUFA4-202ENST00000463308 QPCTQ16769 361 aa6.82□□□□□ -1.32
NDUFA4-202ENST00000463308 PGBD3Q8N328 593 aa6.82□□□□□ -1.32
NDUFA4-202ENST00000463308 CLN3Q13286 438 aa6.81□□□□□ -1.32
NDUFA4-202ENST00000463308 EFHC2Q5JST6 749 aa6.81□□□□□ -1.32
NDUFA4-202ENST00000463308 DZIP3Q86Y13 1208 aaKnown RBP6.81□□□□□ -1.32
NDUFA4-202ENST00000463308 OCSTAMPQ9BR26 566 aa6.81□□□□□ -1.32
NDUFA4-202ENST00000463308 GPAMQ9HCL2 828 aa6.81□□□□□ -1.32
NDUFA4-202ENST00000463308 ADH6P28332 368 aa6.8□□□□□ -1.32
NDUFA4-202ENST00000463308 CTBSQ01459 385 aa6.8□□□□□ -1.32
NDUFA4-202ENST00000463308 AVENQ9NQS1 362 aaPredicted RBP6.8□□□□□ -1.32
NDUFA4-202ENST00000463308 NDFIP2Q9NV92 336 aa6.8□□□□□ -1.32
NDUFA4-202ENST00000463308 HAP1P54257 671 aaPredicted RBP6.79□□□□□ -1.32
NDUFA4-202ENST00000463308 CCDC125Q86Z20 511 aa6.79□□□□□ -1.32
NDUFA4-202ENST00000463308 ABHD17AQ96GS6 310 aa6.79□□□□□ -1.32
NDUFA4-202ENST00000463308 LAMC2Q13753 1193 aa6.77□□□□□ -1.33
NDUFA4-202ENST00000463308 ARID1BQ8NFD5 2236 aaPredicted RBP6.77□□□□□ -1.33
NDUFA4-202ENST00000463308 BNIP3LO60238 219 aa6.76□□□□□ -1.33
NDUFA4-202ENST00000463308 CYP2U1Q7Z449 544 aa6.76□□□□□ -1.33
NDUFA4-202ENST00000463308 LIMD1Q9UGP4 676 aa6.76□□□□□ -1.33
NDUFA4-202ENST00000463308 FIGNL1Q6PIW4 674 aa6.75□□□□□ -1.33
NDUFA4-202ENST00000463308 ERVK-9P63128 1117 aa6.74□□□□□ -1.33
NDUFA4-202ENST00000463308 RTL5Q5HYW3 569 aaPredicted RBP6.74□□□□□ -1.33
NDUFA4-202ENST00000463308 CC2D2BQ6DHV5 1058 aa6.74□□□□□ -1.33
NDUFA4-202ENST00000463308 PNMA1Q8ND90 353 aa6.74□□□□□ -1.33
NDUFA4-202ENST00000463308 RNF112Q9ULX5 631 aa6.74□□□□□ -1.33
NDUFA4-202ENST00000463308 FAM182BQ5T319 152 aa6.73□□□□□ -1.33
NDUFA4-202ENST00000463308 FCHSD1Q86WN1 690 aa6.73□□□□□ -1.33
NDUFA4-202ENST00000463308 RUBCNLQ9H714 662 aa6.73□□□□□ -1.33
NDUFA4-202ENST00000463308 CTDSPL2Q05D32 466 aa6.72□□□□□ -1.33
NDUFA4-202ENST00000463308 MYSM1Q5VVJ2 828 aa6.72□□□□□ -1.33
NDUFA4-202ENST00000463308 CRISPLD1Q9H336 500 aa6.72□□□□□ -1.33
NDUFA4-202ENST00000463308 C9orf172C9J069 976 aa6.71□□□□□ -1.34
NDUFA4-202ENST00000463308 IRAK1P51617 712 aa6.71□□□□□ -1.34
NDUFA4-202ENST00000463308 MSX1P28360 303 aa6.7□□□□□ -1.34
NDUFA4-202ENST00000463308 GTF2E1P29083 439 aaPredicted RBP6.7□□□□□ -1.34
NDUFA4-202ENST00000463308 PHKA2P46019 1235 aa6.7□□□□□ -1.34
NDUFA4-202ENST00000463308 TRIM28Q13263 835 aaKnown RBP6.7□□□□□ -1.34
NDUFA4-202ENST00000463308 NR6A1Q15406 480 aa6.7□□□□□ -1.34
NDUFA4-202ENST00000463308 GNASQ5JWF2 1037 aa6.7□□□□□ -1.34
NDUFA4-202ENST00000463308 KLF15Q9UIH9 416 aa6.7□□□□□ -1.34
NDUFA4-202ENST00000463308 ALAS2P22557 587 aa6.69□□□□□ -1.34
NDUFA4-202ENST00000463308 ARHGEF10LQ9HCE6 1279 aa6.69□□□□□ -1.34
NDUFA4-202ENST00000463308 RNF114Q9Y508 228 aa6.69□□□□□ -1.34
NDUFA4-202ENST00000463308 PCDHGC4Q9Y5F7 938 aa6.69□□□□□ -1.34
NDUFA4-202ENST00000463308 ADGRE1Q14246 886 aa6.68□□□□□ -1.34
NDUFA4-202ENST00000463308 TXNRD3Q86VQ6 643 aa6.68□□□□□ -1.34
NDUFA4-202ENST00000463308 LRRN4Q8WUT4 740 aa6.68□□□□□ -1.34
NDUFA4-202ENST00000463308 ZSCAN10Q96SZ4 725 aaPredicted RBP6.68□□□□□ -1.34
NDUFA4-202ENST00000463308 ESYT1Q9BSJ8 1104 aa6.68□□□□□ -1.34
NDUFA4-202ENST00000463308 PRDM6Q9NQX0 595 aa6.67□□□□□ -1.34
NDUFA4-202ENST00000463308 PCMTD2Q9NV79 361 aa6.67□□□□□ -1.34
NDUFA4-202ENST00000463308 ELOA3CA0A087WX78 387 aaPredicted RBP6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 ELOA3DA6NLF2 546 aaPredicted RBP6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 CENPCQ03188 943 aa6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 MBTPS1Q14703 1052 aa6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 ELOA3BQ3SY89 546 aa6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 ZNF468Q5VIY5 522 aaPredicted RBP6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 RNF20Q5VTR2 975 aa6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 NLRP8Q86W28 1048 aa6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 PARP9Q8IXQ6 854 aa6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 ELOA3Q8NG57 546 aa6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 CNKSR1Q969H4 720 aa6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 KRTAP4-11Q9BYQ6 195 aa6.66□□□□□ -1.34
NDUFA4-202ENST00000463308 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
NDUFA4-202ENST00000463308 TRAK2O60296 914 aa6.65□□□□□ -1.34
NDUFA4-202ENST00000463308 GNRH1P01148 92 aa6.65□□□□□ -1.34
NDUFA4-202ENST00000463308 NRG1Q02297 640 aaPredicted RBP6.65□□□□□ -1.34
NDUFA4-202ENST00000463308 GRIK4Q16099 956 aa6.65□□□□□ -1.34
NDUFA4-202ENST00000463308 TP53INP1Q96A56 240 aa6.65□□□□□ -1.34
NDUFA4-202ENST00000463308 ZCCHC2Q9C0B9 1178 aaKnown RBP6.65□□□□□ -1.34
NDUFA4-202ENST00000463308 ESF1Q9H501 851 aaKnown RBP6.65□□□□□ -1.34
NDUFA4-202ENST00000463308 GIGYF1O75420 1035 aaPredicted RBP6.64□□□□□ -1.35
NDUFA4-202ENST00000463308 TAL1P17542 331 aaPredicted RBP6.64□□□□□ -1.35
NDUFA4-202ENST00000463308 CLK2P49760 499 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms