RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 KIAA1551Q9HCM1 1747 aa21.51■■□□□ 1.03
APP-211ENST00000462267 DPEP1P16444 411 aa21.5■■□□□ 1.03
APP-211ENST00000462267 ATP6V1AP38606 617 aa21.5■■□□□ 1.03
APP-211ENST00000462267 ITPK1Q13572 414 aa21.5■■□□□ 1.03
APP-211ENST00000462267 HSP90AB2PQ58FF8 381 aa21.5■■□□□ 1.03
APP-211ENST00000462267 CCDC87Q9NVE4 849 aa21.5■■□□□ 1.03
APP-211ENST00000462267 N4BP2Q86UW6 1770 aaPredicted RBP21.49■■□□□ 1.03
APP-211ENST00000462267 TMF1P82094 1093 aa21.49■■□□□ 1.03
APP-211ENST00000462267 KIF24Q5T7B8 1368 aa21.48■■□□□ 1.03
APP-211ENST00000462267 FYB1O15117 783 aa21.48■■□□□ 1.03
APP-211ENST00000462267 TRAPPC3LQ5T215 181 aa21.48■■□□□ 1.03
APP-211ENST00000462267 TMOD3Q9NYL9 352 aa21.48■■□□□ 1.03
APP-211ENST00000462267 FLT4P35916 1363 aa21.48■■□□□ 1.03
APP-211ENST00000462267 GGNBP2Q9H3C7 697 aa21.47■■□□□ 1.03
APP-211ENST00000462267 ASAP1Q9ULH1 1129 aa21.47■■□□□ 1.03
APP-211ENST00000462267 SPG7Q9UQ90 795 aa21.47■■□□□ 1.03
APP-211ENST00000462267 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
APP-211ENST00000462267 PCNTO95613 3336 aa21.46■■□□□ 1.03
APP-211ENST00000462267 SMC1BQ8NDV3 1235 aa21.46■■□□□ 1.03
APP-211ENST00000462267 SLC24A1O60721 1099 aa21.45■■□□□ 1.02
APP-211ENST00000462267 KCPQ6ZWJ8 1503 aa21.45■■□□□ 1.02
APP-211ENST00000462267 PKD1L3Q7Z443 1732 aa21.44■■□□□ 1.02
APP-211ENST00000462267 ADRA2BP18089 450 aa21.44■■□□□ 1.02
APP-211ENST00000462267 RRAGCQ9HB90 399 aa21.44■■□□□ 1.02
APP-211ENST00000462267 PIM2Q9P1W9 311 aa21.44■■□□□ 1.02
APP-211ENST00000462267 PARP3Q9Y6F1 533 aa21.44■■□□□ 1.02
APP-211ENST00000462267 KCNA3P22001 575 aa21.43■■□□□ 1.02
APP-211ENST00000462267 DCAF5Q96JK2 942 aa21.43■■□□□ 1.02
APP-211ENST00000462267 TESK2Q96S53 571 aa21.43■■□□□ 1.02
APP-211ENST00000462267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.43■■□□□ 1.02
APP-211ENST00000462267 ARHGEF1Q92888 912 aaKnown RBP21.42■■□□□ 1.02
APP-211ENST00000462267 RNF181Q9P0P0 153 aa21.42■■□□□ 1.02
APP-211ENST00000462267 BRCA1P38398 1863 aaKnown RBP21.41■■□□□ 1.02
APP-211ENST00000462267 NCAPD2Q15021 1401 aa21.41■■□□□ 1.02
APP-211ENST00000462267 GYS1P13807 737 aa21.41■■□□□ 1.02
APP-211ENST00000462267 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
APP-211ENST00000462267 RC3H1Q5TC82 1133 aaKnown RBP21.41■■□□□ 1.02
APP-211ENST00000462267 ATG3Q9NT62 314 aa21.41■■□□□ 1.02
APP-211ENST00000462267 C4AP0C0L4 1744 aa21.41■■□□□ 1.02
APP-211ENST00000462267 HSPA1AP0DMV8 641 aaKnown RBP21.4■■□□□ 1.02
APP-211ENST00000462267 HSPA1BP0DMV9 641 aaKnown RBP21.4■■□□□ 1.02
APP-211ENST00000462267 RFC4P35249 363 aa21.4■■□□□ 1.02
APP-211ENST00000462267 ARFGEF1Q9Y6D6 1849 aa21.4■■□□□ 1.02
APP-211ENST00000462267 IFNL2Q8IZJ0 200 aa21.39■■□□□ 1.01
APP-211ENST00000462267 TNRC6CQ9HCJ0 1690 aaKnown RBP21.37■■□□□ 1.01
APP-211ENST00000462267 KDRP35968 1356 aa21.37■■□□□ 1.01
APP-211ENST00000462267 ST20-MTHFSA0A0A6YYL1 179 aa21.37■■□□□ 1.01
APP-211ENST00000462267 RPS6KA4O75676 772 aa21.37■■□□□ 1.01
APP-211ENST00000462267 PHKG2P15735 406 aa21.37■■□□□ 1.01
APP-211ENST00000462267 TONSLQ96HA7 1378 aa21.36■■□□□ 1.01
APP-211ENST00000462267 CNTNAP4Q9C0A0 1308 aa21.36■■□□□ 1.01
APP-211ENST00000462267 ZC3H4Q9UPT8 1303 aaKnown RBP21.36■■□□□ 1.01
APP-211ENST00000462267 SLC4A9Q96Q91 983 aa21.35■■□□□ 1.01
APP-211ENST00000462267 EMILIN1Q9Y6C2 1016 aa21.34■■□□□ 1.01
APP-211ENST00000462267 VEGFAP15692 232 aaPredicted RBP21.33■■□□□ 1.01
APP-211ENST00000462267 RBM42Q9BTD8 480 aaKnown RBP21.33■■□□□ 1.01
APP-211ENST00000462267 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1
APP-211ENST00000462267 EYA1Q99502 592 aa21.32■■□□□ 1
APP-211ENST00000462267 ERVV-2B6SEH9 535 aa21.31■■□□□ 1
APP-211ENST00000462267 WASHC2AQ641Q2 1341 aa21.29■■□□□ 1
APP-211ENST00000462267 SBF1O95248 1867 aa21.29■■□□□ 1
APP-211ENST00000462267 GLTPD2A6NH11 291 aa21.29■■□□□ 1
APP-211ENST00000462267 PPM1GO15355 546 aaPredicted RBP21.29■■□□□ 1
APP-211ENST00000462267 CHRNA5P30532 468 aa21.29■■□□□ 1
APP-211ENST00000462267 DDR1Q08345 913 aa21.28■■□□□ 1
APP-211ENST00000462267 KDM6AO15550 1401 aaPredicted RBP21.28■■□□□ 1
APP-211ENST00000462267 FKBP8Q14318 412 aa21.27■■□□□ 1
APP-211ENST00000462267 KIF20BQ96Q89 1820 aa21.27■□□□□ 0.99
APP-211ENST00000462267 COL5A3P25940 1745 aaPredicted RBP21.26■□□□□ 0.99
APP-211ENST00000462267 HSP90AB1P08238 724 aaKnown RBP21.26■□□□□ 0.99
APP-211ENST00000462267 LMNB1P20700 586 aa21.26■□□□□ 0.99
APP-211ENST00000462267 USP42Q9H9J4 1324 aaKnown RBP21.26■□□□□ 0.99
APP-211ENST00000462267 SLC34A2O95436 690 aa21.25■□□□□ 0.99
APP-211ENST00000462267 SRP68Q9UHB9 627 aaKnown RBP21.25■□□□□ 0.99
APP-211ENST00000462267 RASSF7Q02833 373 aa21.24■□□□□ 0.99
APP-211ENST00000462267 POLRMTO00411 1230 aaKnown RBP21.23■□□□□ 0.99
APP-211ENST00000462267 CRKLP46109 303 aaKnown RBP21.23■□□□□ 0.99
APP-211ENST00000462267 MYH14Q7Z406 1995 aaKnown RBP21.23■□□□□ 0.99
APP-211ENST00000462267 TM4SF1P30408 202 aa21.22■□□□□ 0.99
APP-211ENST00000462267 CABP4P57796 275 aa21.21■□□□□ 0.99
APP-211ENST00000462267 CDCA8Q53HL2 280 aa21.21■□□□□ 0.99
APP-211ENST00000462267 ANKRD26Q9UPS8 1709 aa21.21■□□□□ 0.99
APP-211ENST00000462267 CARD14Q9BXL6 1004 aa21.2■□□□□ 0.98
APP-211ENST00000462267 PTCD1O75127 700 aaKnown RBP21.19■□□□□ 0.98
APP-211ENST00000462267 CREBZFQ9NS37 354 aa21.19■□□□□ 0.98
APP-211ENST00000462267 POTECB2RU33 542 aa21.18■□□□□ 0.98
APP-211ENST00000462267 DPY19L2Q6NUT2 758 aa21.18■□□□□ 0.98
APP-211ENST00000462267 PRDM10Q9NQV6 1147 aa21.18■□□□□ 0.98
APP-211ENST00000462267 ZPR1O75312 459 aa21.17■□□□□ 0.98
APP-211ENST00000462267 PLEKHO1Q53GL0 409 aaPredicted RBP21.17■□□□□ 0.98
APP-211ENST00000462267 TTLL6Q8N841 843 aa21.17■□□□□ 0.98
APP-211ENST00000462267 POLKQ9UBT6 870 aa21.17■□□□□ 0.98
APP-211ENST00000462267 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
APP-211ENST00000462267 MKRN1Q9UHC7 482 aaKnown RBP21.16■□□□□ 0.98
APP-211ENST00000462267 INTS5Q6P9B9 1019 aaKnown RBP21.15■□□□□ 0.98
APP-211ENST00000462267 NFKBIEO00221 500 aa21.14■□□□□ 0.97
APP-211ENST00000462267 FOXN1O15353 648 aa21.14■□□□□ 0.97
APP-211ENST00000462267 AMOTQ4VCS5 1084 aa21.14■□□□□ 0.97
APP-211ENST00000462267 ZNF530Q6P9A1 599 aaPredicted RBP21.14■□□□□ 0.97
APP-211ENST00000462267 MTHFSP49914 203 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms