RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 OXCT2Q9BYC2 517 aaPredicted RBP10.33□□□□□ -0.76
CFHR3-204ENST00000461558 SNRKQ9NRH2 765 aa10.33□□□□□ -0.76
CFHR3-204ENST00000461558 GNRH1P01148 92 aa10.32□□□□□ -0.76
CFHR3-204ENST00000461558 F11P03951 625 aa10.32□□□□□ -0.76
CFHR3-204ENST00000461558 IL2RAP01589 272 aa10.31□□□□□ -0.76
CFHR3-204ENST00000461558 CNKSR1Q969H4 720 aa10.31□□□□□ -0.76
CFHR3-204ENST00000461558 ESYT1Q9BSJ8 1104 aa10.31□□□□□ -0.76
CFHR3-204ENST00000461558 SNRPNP63162 240 aaKnown RBP10.3□□□□□ -0.76
CFHR3-204ENST00000461558 CCDC85AQ96PX6 553 aaPredicted RBP10.3□□□□□ -0.76
CFHR3-204ENST00000461558 CEP126Q9P2H0 1117 aa10.3□□□□□ -0.76
CFHR3-204ENST00000461558 MKL2Q9ULH7 1088 aa10.3□□□□□ -0.76
CFHR3-204ENST00000461558 MYCP01106 439 aaPredicted RBP10.29□□□□□ -0.76
CFHR3-204ENST00000461558 CENPCQ03188 943 aa10.29□□□□□ -0.76
CFHR3-204ENST00000461558 ALYREFQ86V81 257 aaKnown RBP10.29□□□□□ -0.76
CFHR3-204ENST00000461558 CDCA7Q9BWT1 371 aaPredicted RBP10.29□□□□□ -0.76
CFHR3-204ENST00000461558 KRBA1A5PL33 1030 aa10.28□□□□□ -0.76
CFHR3-204ENST00000461558 BAG6P46379 1132 aa10.28□□□□□ -0.76
CFHR3-204ENST00000461558 CFHR5Q9BXR6 569 aa10.28□□□□□ -0.76
CFHR3-204ENST00000461558 HRH3Q9Y5N1 445 aa10.28□□□□□ -0.76
CFHR3-204ENST00000461558 THBS1P07996 1170 aa10.27□□□□□ -0.77
CFHR3-204ENST00000461558 SHISA8B8ZZ34 492 aa10.26□□□□□ -0.77
CFHR3-204ENST00000461558 SLC24A1O60721 1099 aa10.26□□□□□ -0.77
CFHR3-204ENST00000461558 ZSCAN10Q96SZ4 725 aaPredicted RBP10.26□□□□□ -0.77
CFHR3-204ENST00000461558 RRAGCQ9HB90 399 aa10.26□□□□□ -0.77
CFHR3-204ENST00000461558 GPAMQ9HCL2 828 aa10.26□□□□□ -0.77
CFHR3-204ENST00000461558 PHF24Q9UPV7 400 aa10.26□□□□□ -0.77
CFHR3-204ENST00000461558 A0A1B0GTH6 734 aa10.25□□□□□ -0.77
CFHR3-204ENST00000461558 PHKA2P46019 1235 aa10.25□□□□□ -0.77
CFHR3-204ENST00000461558 XAGE2Q96GT9 111 aa10.25□□□□□ -0.77
CFHR3-204ENST00000461558 FHDC1Q9C0D6 1143 aaPredicted RBP10.25□□□□□ -0.77
CFHR3-204ENST00000461558 GDF2Q9UK05 429 aaPredicted RBP10.25□□□□□ -0.77
CFHR3-204ENST00000461558 KLRG1Q96E93 195 aa10.24□□□□□ -0.77
CFHR3-204ENST00000461558 GNASQ5JWF2 1037 aa10.23□□□□□ -0.77
CFHR3-204ENST00000461558 EDARADDQ8WWZ3 215 aa10.23□□□□□ -0.77
CFHR3-204ENST00000461558 TBC1D2BQ9UPU7 963 aa10.23□□□□□ -0.77
CFHR3-204ENST00000461558 COL8A1P27658 744 aa10.22□□□□□ -0.77
CFHR3-204ENST00000461558 GTF2E1P29083 439 aaPredicted RBP10.22□□□□□ -0.77
CFHR3-204ENST00000461558 C4orf17Q53FE4 359 aa10.22□□□□□ -0.77
CFHR3-204ENST00000461558 ESCO1Q5FWF5 840 aa10.22□□□□□ -0.77
CFHR3-204ENST00000461558 TMEM214Q6NUQ4 689 aaKnown RBP10.22□□□□□ -0.77
CFHR3-204ENST00000461558 C1orf229Q6ZS94 237 aaPredicted RBP10.22□□□□□ -0.77
CFHR3-204ENST00000461558 Q8N3U1 123 aa10.22□□□□□ -0.77
CFHR3-204ENST00000461558 FURINP09958 794 aa10.21□□□□□ -0.77
CFHR3-204ENST00000461558 UBAP2LQ14157 1087 aaKnown RBP10.21□□□□□ -0.77
CFHR3-204ENST00000461558 LBRQ14739 615 aaKnown RBP10.21□□□□□ -0.77
CFHR3-204ENST00000461558 GOLGA6L1Q8N7Z2 621 aa10.21□□□□□ -0.77
CFHR3-204ENST00000461558 DOLKQ9UPQ8 538 aa10.21□□□□□ -0.77
CFHR3-204ENST00000461558 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
CFHR3-204ENST00000461558 GRIN2CQ14957 1233 aa10.2□□□□□ -0.78
CFHR3-204ENST00000461558 TSGA10IPQ3SY00 556 aa10.2□□□□□ -0.78
CFHR3-204ENST00000461558 PHTF2Q8N3S3 785 aa10.2□□□□□ -0.78
CFHR3-204ENST00000461558 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.19□□□□□ -0.78
CFHR3-204ENST00000461558 AMPD1P23109 780 aa10.19□□□□□ -0.78
CFHR3-204ENST00000461558 USP4Q13107 963 aa10.19□□□□□ -0.78
CFHR3-204ENST00000461558 RUBCNLQ9H714 662 aa10.19□□□□□ -0.78
CFHR3-204ENST00000461558 ETNK1Q9HBU6 452 aa10.19□□□□□ -0.78
CFHR3-204ENST00000461558 PIK3R2O00459 728 aa10.18□□□□□ -0.78
CFHR3-204ENST00000461558 STAU1O95793 577 aaKnown RBP10.18□□□□□ -0.78
CFHR3-204ENST00000461558 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
CFHR3-204ENST00000461558 MSX1P28360 303 aa10.18□□□□□ -0.78
CFHR3-204ENST00000461558 IRF5Q13568 498 aa10.18□□□□□ -0.78
CFHR3-204ENST00000461558 SLFNL1Q499Z3 407 aa10.18□□□□□ -0.78
CFHR3-204ENST00000461558 RNF135Q8IUD6 432 aa10.18□□□□□ -0.78
CFHR3-204ENST00000461558 PGBD3Q8N328 593 aa10.18□□□□□ -0.78
CFHR3-204ENST00000461558 PRM3Q9NNZ6 103 aa10.18□□□□□ -0.78
CFHR3-204ENST00000461558 EFHC2Q5JST6 749 aa10.17□□□□□ -0.78
CFHR3-204ENST00000461558 PPARGC1BQ86YN6 1023 aaKnown RBP10.17□□□□□ -0.78
CFHR3-204ENST00000461558 RHBDD1Q8TEB9 315 aa10.17□□□□□ -0.78
CFHR3-204ENST00000461558 KRTAP9-2Q9BYQ4 174 aa10.17□□□□□ -0.78
CFHR3-204ENST00000461558 ATXN7L1Q9ULK2 861 aaPredicted RBP10.17□□□□□ -0.78
CFHR3-204ENST00000461558 BMP4P12644 408 aa10.16□□□□□ -0.78
CFHR3-204ENST00000461558 TLR1Q15399 786 aa10.16□□□□□ -0.78
CFHR3-204ENST00000461558 OXLD1Q5BKU9 147 aa10.16□□□□□ -0.78
CFHR3-204ENST00000461558 CHIC2Q9UKJ5 165 aa10.16□□□□□ -0.78
CFHR3-204ENST00000461558 LINC00114Q6XXX2 140 aa10.15□□□□□ -0.78
CFHR3-204ENST00000461558 SLCO4C1Q6ZQN7 724 aa10.15□□□□□ -0.78
CFHR3-204ENST00000461558 SUV39H2Q9H5I1 410 aa10.15□□□□□ -0.78
CFHR3-204ENST00000461558 GNB5O14775 395 aa10.14□□□□□ -0.79
CFHR3-204ENST00000461558 SIRT1Q96EB6 747 aa10.14□□□□□ -0.79
CFHR3-204ENST00000461558 ABHD17AQ96GS6 310 aa10.14□□□□□ -0.79
CFHR3-204ENST00000461558 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
CFHR3-204ENST00000461558 GGA1Q9UJY5 639 aa10.14□□□□□ -0.79
CFHR3-204ENST00000461558 HOXB4P17483 251 aaPredicted RBP10.13□□□□□ -0.79
CFHR3-204ENST00000461558 CRISPLD1Q9H336 500 aa10.13□□□□□ -0.79
CFHR3-204ENST00000461558 NDFIP2Q9NV92 336 aa10.13□□□□□ -0.79
CFHR3-204ENST00000461558 KRTAP9-6A0A140TA67 174 aa10.12□□□□□ -0.79
CFHR3-204ENST00000461558 C2CD2LO14523 706 aa10.12□□□□□ -0.79
CFHR3-204ENST00000461558 FGFR3P22607 806 aa10.12□□□□□ -0.79
CFHR3-204ENST00000461558 PLA2G4AP47712 749 aa10.12□□□□□ -0.79
CFHR3-204ENST00000461558 SCNN1DP51172 638 aa10.12□□□□□ -0.79
CFHR3-204ENST00000461558 VAC14Q08AM6 782 aa10.12□□□□□ -0.79
CFHR3-204ENST00000461558 C1QTNF9BB2RNN3 333 aa10.11□□□□□ -0.79
CFHR3-204ENST00000461558 BNIP3LO60238 219 aa10.11□□□□□ -0.79
CFHR3-204ENST00000461558 TBC1D9Q6ZT07 1266 aa10.11□□□□□ -0.79
CFHR3-204ENST00000461558 NOP53Q9NZM5 478 aaKnown RBP10.11□□□□□ -0.79
CFHR3-204ENST00000461558 INHAP05111 366 aa10.1□□□□□ -0.79
CFHR3-204ENST00000461558 GDF10P55107 478 aa10.1□□□□□ -0.79
CFHR3-204ENST00000461558 EPXP11678 715 aa10.09□□□□□ -0.79
CFHR3-204ENST00000461558 CTBSQ01459 385 aa10.09□□□□□ -0.79
CFHR3-204ENST00000461558 CD163Q86VB7 1156 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms