RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 PHTF2Q8N3S3 785 aa8.92□□□□□ -0.98
COL21A1-205ENST00000461489 GPAMQ9HCL2 828 aa8.92□□□□□ -0.98
COL21A1-205ENST00000461489 ENAMQ9NRM1 1142 aa8.92□□□□□ -0.98
COL21A1-205ENST00000461489 SCARF2Q96GP6 870 aaPredicted RBP8.91□□□□□ -0.98
COL21A1-205ENST00000461489 MX2P20592 715 aa8.9□□□□□ -0.98
COL21A1-205ENST00000461489 SIRT1Q96EB6 747 aa8.9□□□□□ -0.98
COL21A1-205ENST00000461489 FHDC1Q9C0D6 1143 aaPredicted RBP8.9□□□□□ -0.98
COL21A1-205ENST00000461489 NSFL1CQ9UNZ2 370 aaKnown RBP8.9□□□□□ -0.98
COL21A1-205ENST00000461489 HRH3Q9Y5N1 445 aa8.9□□□□□ -0.98
COL21A1-205ENST00000461489 A0A1B0GTH6 734 aa8.89□□□□□ -0.99
COL21A1-205ENST00000461489 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
COL21A1-205ENST00000461489 ETNK1Q9HBU6 452 aa8.89□□□□□ -0.99
COL21A1-205ENST00000461489 STAU1O95793 577 aaKnown RBP8.88□□□□□ -0.99
COL21A1-205ENST00000461489 BCRP11274 1271 aa8.88□□□□□ -0.99
COL21A1-205ENST00000461489 C4orf17Q53FE4 359 aa8.88□□□□□ -0.99
COL21A1-205ENST00000461489 KANK3Q6NY19 840 aa8.88□□□□□ -0.99
COL21A1-205ENST00000461489 CSB-PGBD3P0DP91 1061 aa8.87□□□□□ -0.99
COL21A1-205ENST00000461489 SEMA3FQ13275 785 aa8.87□□□□□ -0.99
COL21A1-205ENST00000461489 TLR1Q15399 786 aa8.87□□□□□ -0.99
COL21A1-205ENST00000461489 PGBD3Q8N328 593 aa8.87□□□□□ -0.99
COL21A1-205ENST00000461489 NEDD1Q8NHV4 660 aa8.87□□□□□ -0.99
COL21A1-205ENST00000461489 ACDQ96AP0 544 aa8.87□□□□□ -0.99
COL21A1-205ENST00000461489 MCM6Q14566 821 aa8.86□□□□□ -0.99
COL21A1-205ENST00000461489 RHBDD1Q8TEB9 315 aa8.86□□□□□ -0.99
COL21A1-205ENST00000461489 RUBCNLQ9H714 662 aa8.86□□□□□ -0.99
COL21A1-205ENST00000461489 CHIC2Q9UKJ5 165 aa8.86□□□□□ -0.99
COL21A1-205ENST00000461489 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
COL21A1-205ENST00000461489 THBS1P07996 1170 aa8.85□□□□□ -0.99
COL21A1-205ENST00000461489 MSX1P28360 303 aa8.85□□□□□ -0.99
COL21A1-205ENST00000461489 MAP7D1Q3KQU3 841 aa8.85□□□□□ -0.99
COL21A1-205ENST00000461489 PLPP7Q8NBV4 271 aa8.85□□□□□ -0.99
COL21A1-205ENST00000461489 CFHR5Q9BXR6 569 aa8.85□□□□□ -0.99
COL21A1-205ENST00000461489 DNMT3AQ9Y6K1 912 aaPredicted RBP8.85□□□□□ -0.99
COL21A1-205ENST00000461489 SOX11P35716 441 aa8.84□□□□□ -0.99
COL21A1-205ENST00000461489 MAP2K3P46734 347 aa8.84□□□□□ -0.99
COL21A1-205ENST00000461489 GDF10P55107 478 aa8.84□□□□□ -0.99
COL21A1-205ENST00000461489 EFHC2Q5JST6 749 aa8.84□□□□□ -0.99
COL21A1-205ENST00000461489 PPARGC1BQ86YN6 1023 aaKnown RBP8.84□□□□□ -0.99
COL21A1-205ENST00000461489 LBRQ14739 615 aaKnown RBP8.83□□□□□ -1
COL21A1-205ENST00000461489 PODNQ7Z5L7 613 aa8.83□□□□□ -1
COL21A1-205ENST00000461489 PHF20L1A8MW92 1017 aa8.82□□□□□ -1
COL21A1-205ENST00000461489 INHAP05111 366 aa8.82□□□□□ -1
COL21A1-205ENST00000461489 PRKCSHP14314 528 aaPredicted RBP8.82□□□□□ -1
COL21A1-205ENST00000461489 PLA2G4AP47712 749 aa8.82□□□□□ -1
COL21A1-205ENST00000461489 SCNN1DP51172 638 aa8.82□□□□□ -1
COL21A1-205ENST00000461489 TBC1D9Q6ZT07 1266 aa8.82□□□□□ -1
COL21A1-205ENST00000461489 OXCT2Q9BYC2 517 aaPredicted RBP8.82□□□□□ -1
COL21A1-205ENST00000461489 CNTNAP5Q8WYK1 1306 aa8.81□□□□□ -1
COL21A1-205ENST00000461489 GPAT2Q6NUI2 795 aa8.81□□□□□ -1
COL21A1-205ENST00000461489 BEND7Q8N7W2 519 aaPredicted RBP8.81□□□□□ -1
COL21A1-205ENST00000461489 LRRC4BQ9NT99 713 aa8.81□□□□□ -1
COL21A1-205ENST00000461489 OIP5O43482 229 aa8.8□□□□□ -1
COL21A1-205ENST00000461489 COG6Q9Y2V7 657 aa8.8□□□□□ -1
COL21A1-205ENST00000461489 SMTNP53814 917 aa8.79□□□□□ -1
COL21A1-205ENST00000461489 UBAP2LQ14157 1087 aaKnown RBP8.79□□□□□ -1
COL21A1-205ENST00000461489 KLRG1Q96E93 195 aa8.79□□□□□ -1
COL21A1-205ENST00000461489 ABHD17AQ96GS6 310 aa8.79□□□□□ -1
COL21A1-205ENST00000461489 NIFKQ9BYG3 293 aaKnown RBP8.79□□□□□ -1
COL21A1-205ENST00000461489 SERTAD1Q9UHV2 236 aa8.79□□□□□ -1
COL21A1-205ENST00000461489 ATXN7L1Q9ULK2 861 aaPredicted RBP8.79□□□□□ -1
COL21A1-205ENST00000461489 PIK3CDO00329 1044 aa8.78□□□□□ -1
COL21A1-205ENST00000461489 BMP4P12644 408 aa8.78□□□□□ -1
COL21A1-205ENST00000461489 FOXK2Q01167 660 aa8.78□□□□□ -1
COL21A1-205ENST00000461489 WWC1Q8IX03 1113 aa8.78□□□□□ -1
COL21A1-205ENST00000461489 AIDAQ96BJ3 306 aa8.78□□□□□ -1
COL21A1-205ENST00000461489 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
COL21A1-205ENST00000461489 IGHA1P01876 353 aa8.77□□□□□ -1.01
COL21A1-205ENST00000461489 GDF2Q9UK05 429 aaPredicted RBP8.77□□□□□ -1.01
COL21A1-205ENST00000461489 BNIP3LO60238 219 aa8.76□□□□□ -1.01
COL21A1-205ENST00000461489 SKIP12755 728 aa8.76□□□□□ -1.01
COL21A1-205ENST00000461489 FGFR3P22607 806 aa8.76□□□□□ -1.01
COL21A1-205ENST00000461489 SUZ12Q15022 739 aaKnown RBP8.76□□□□□ -1.01
COL21A1-205ENST00000461489 EML3Q32P44 896 aa8.76□□□□□ -1.01
COL21A1-205ENST00000461489 FIGNL1Q6PIW4 674 aa8.76□□□□□ -1.01
COL21A1-205ENST00000461489 GALNT6Q8NCL4 622 aa8.76□□□□□ -1.01
COL21A1-205ENST00000461489 C1orf216Q8TAB5 229 aa8.76□□□□□ -1.01
COL21A1-205ENST00000461489 TMEM229AB2RXF0 380 aa8.75□□□□□ -1.01
COL21A1-205ENST00000461489 SHISA8B8ZZ34 492 aa8.75□□□□□ -1.01
COL21A1-205ENST00000461489 ATP4AP20648 1035 aa8.75□□□□□ -1.01
COL21A1-205ENST00000461489 GOLGA6L1Q8N7Z2 621 aa8.75□□□□□ -1.01
COL21A1-205ENST00000461489 A6NJY4 79 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 CTBSQ01459 385 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 NBPF1Q3BBV0 1214 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 DCAF5Q96JK2 942 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 SLC4A9Q96Q91 983 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 RRAGCQ9HB90 399 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 NDFIP2Q9NV92 336 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 NOD1Q9Y239 953 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 PCDHGC4Q9Y5F7 938 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 PCDHGA11Q9Y5H2 935 aa8.74□□□□□ -1.01
COL21A1-205ENST00000461489 CDK2AP1O14519 115 aa8.73□□□□□ -1.01
COL21A1-205ENST00000461489 C2CD2LO14523 706 aa8.73□□□□□ -1.01
COL21A1-205ENST00000461489 RAD21O60216 631 aa8.73□□□□□ -1.01
COL21A1-205ENST00000461489 PSME1Q06323 249 aa8.73□□□□□ -1.01
COL21A1-205ENST00000461489 ARSJQ5FYB0 599 aaPredicted RBP8.73□□□□□ -1.01
COL21A1-205ENST00000461489 NLRP8Q86W28 1048 aa8.73□□□□□ -1.01
COL21A1-205ENST00000461489 EDARADDQ8WWZ3 215 aa8.73□□□□□ -1.01
COL21A1-205ENST00000461489 POM121Q96HA1 1249 aa8.73□□□□□ -1.01
COL21A1-205ENST00000461489 ZCCHC2Q9C0B9 1178 aaKnown RBP8.73□□□□□ -1.01
COL21A1-205ENST00000461489 ALG2Q9H553 416 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms