RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
MSH2-204ENST00000461394 TEFQ10587 303 aa8.63□□□□□ -1.03
MSH2-204ENST00000461394 TMEM57Q8N5G2 664 aa8.63□□□□□ -1.03
MSH2-204ENST00000461394 API5Q9BZZ5 524 aaKnown RBP8.63□□□□□ -1.03
MSH2-204ENST00000461394 CHMP4BQ9H444 224 aaKnown RBP8.63□□□□□ -1.03
MSH2-204ENST00000461394 PRDM11Q9NQV5 511 aa8.63□□□□□ -1.03
MSH2-204ENST00000461394 AXIN2Q9Y2T1 843 aa8.63□□□□□ -1.03
MSH2-204ENST00000461394 KIAA0232Q92628 1395 aa8.62□□□□□ -1.03
MSH2-204ENST00000461394 ERBB3P21860 1342 aa8.62□□□□□ -1.03
MSH2-204ENST00000461394 TAF7Q15545 349 aaPredicted RBP8.62□□□□□ -1.03
MSH2-204ENST00000461394 KRT24Q2M2I5 525 aa8.62□□□□□ -1.03
MSH2-204ENST00000461394 AKAP4Q5JQC9 854 aa8.62□□□□□ -1.03
MSH2-204ENST00000461394 STK31Q9BXU1 1019 aa8.62□□□□□ -1.03
MSH2-204ENST00000461394 RWDD1Q9H446 243 aaPredicted RBP8.62□□□□□ -1.03
MSH2-204ENST00000461394 ABCC6O95255 1503 aa8.62□□□□□ -1.03
MSH2-204ENST00000461394 ROBO1Q9Y6N7 1651 aa8.62□□□□□ -1.03
MSH2-204ENST00000461394 KDM2BQ8NHM5 1336 aa8.61□□□□□ -1.03
MSH2-204ENST00000461394 RGS3P49796 1198 aa8.61□□□□□ -1.03
MSH2-204ENST00000461394 MPRIPQ6WCQ1 1025 aa8.61□□□□□ -1.03
MSH2-204ENST00000461394 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
MSH2-204ENST00000461394 SPG7Q9UQ90 795 aa8.61□□□□□ -1.03
MSH2-204ENST00000461394 RBM19Q9Y4C8 960 aaKnown RBP8.61□□□□□ -1.03
MSH2-204ENST00000461394 NCAPD2Q15021 1401 aa8.61□□□□□ -1.03
MSH2-204ENST00000461394 KDM3BQ7LBC6 1761 aa8.61□□□□□ -1.03
MSH2-204ENST00000461394 PARP4Q9UKK3 1724 aaKnown RBP8.6□□□□□ -1.03
MSH2-204ENST00000461394 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
MSH2-204ENST00000461394 BRPF1P55201 1214 aaPredicted RBP8.6□□□□□ -1.03
MSH2-204ENST00000461394 EVA1CP58658 441 aa8.6□□□□□ -1.03
MSH2-204ENST00000461394 TOM1L2Q6ZVM7 507 aa8.6□□□□□ -1.03
MSH2-204ENST00000461394 IL17REQ8NFR9 667 aa8.6□□□□□ -1.03
MSH2-204ENST00000461394 ARHGAP45Q92619 1136 aa8.6□□□□□ -1.03
MSH2-204ENST00000461394 CPDO75976 1380 aa8.6□□□□□ -1.03
MSH2-204ENST00000461394 SCN11AQ9UI33 1791 aa8.59□□□□□ -1.03
MSH2-204ENST00000461394 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
MSH2-204ENST00000461394 RNMTO43148 476 aaKnown RBP8.59□□□□□ -1.03
MSH2-204ENST00000461394 IGHDP01880 384 aa8.59□□□□□ -1.03
MSH2-204ENST00000461394 CCDC30Q5VVM6 783 aa8.59□□□□□ -1.03
MSH2-204ENST00000461394 LGR6Q9HBX8 967 aa8.59□□□□□ -1.03
MSH2-204ENST00000461394 STRN4Q9NRL3 753 aa8.59□□□□□ -1.03
MSH2-204ENST00000461394 BABAM1Q9NWV8 329 aa8.59□□□□□ -1.03
MSH2-204ENST00000461394 PHLPP1O60346 1717 aa8.59□□□□□ -1.03
MSH2-204ENST00000461394 CACNA1FO60840 1977 aa8.59□□□□□ -1.03
MSH2-204ENST00000461394 PTPRCP08575 1304 aa8.58□□□□□ -1.04
MSH2-204ENST00000461394 SKAP1Q86WV1 359 aa8.58□□□□□ -1.04
MSH2-204ENST00000461394 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
MSH2-204ENST00000461394 PKD1L3Q7Z443 1732 aa8.57□□□□□ -1.04
MSH2-204ENST00000461394 ABCC4O15439 1325 aa8.57□□□□□ -1.04
MSH2-204ENST00000461394 SPDYE2BA6NHP3 402 aa8.57□□□□□ -1.04
MSH2-204ENST00000461394 SPDYE6P0CI01 402 aa8.57□□□□□ -1.04
MSH2-204ENST00000461394 EIF2S2P20042 333 aaKnown RBP8.57□□□□□ -1.04
MSH2-204ENST00000461394 SPDYE2Q495Y8 402 aa8.57□□□□□ -1.04
MSH2-204ENST00000461394 HDGFL1Q5TGJ6 251 aa8.57□□□□□ -1.04
MSH2-204ENST00000461394 SLC4A10Q6U841 1118 aa8.57□□□□□ -1.04
MSH2-204ENST00000461394 CHMP4AQ9BY43 222 aa8.57□□□□□ -1.04
MSH2-204ENST00000461394 MEGF6O75095 1541 aa8.57□□□□□ -1.04
MSH2-204ENST00000461394 SIPA1L3O60292 1781 aaPredicted RBP8.57□□□□□ -1.04
MSH2-204ENST00000461394 SOS1Q07889 1333 aaPredicted RBP8.56□□□□□ -1.04
MSH2-204ENST00000461394 OVOS2A0A0G2JMS6 1433 aa8.56□□□□□ -1.04
MSH2-204ENST00000461394 FKBP5Q13451 457 aaPredicted RBP8.56□□□□□ -1.04
MSH2-204ENST00000461394 IFNL2Q8IZJ0 200 aa8.56□□□□□ -1.04
MSH2-204ENST00000461394 C1orf115Q9H7X2 142 aa8.56□□□□□ -1.04
MSH2-204ENST00000461394 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
MSH2-204ENST00000461394 CEMIPQ8WUJ3 1361 aa8.56□□□□□ -1.04
MSH2-204ENST00000461394 COL14A1Q05707 1796 aaKnown RBP8.56□□□□□ -1.04
MSH2-204ENST00000461394 WDR17Q8IZU2 1322 aa8.55□□□□□ -1.04
MSH2-204ENST00000461394 AHDC1Q5TGY3 1603 aaPredicted RBP8.55□□□□□ -1.04
MSH2-204ENST00000461394 HSP90AB1P08238 724 aaKnown RBP8.55□□□□□ -1.04
MSH2-204ENST00000461394 PHKG2P15735 406 aa8.55□□□□□ -1.04
MSH2-204ENST00000461394 PDE4AP27815 886 aa8.55□□□□□ -1.04
MSH2-204ENST00000461394 PIP4K2BP78356 416 aa8.55□□□□□ -1.04
MSH2-204ENST00000461394 GSE1Q14687 1217 aa8.55□□□□□ -1.04
MSH2-204ENST00000461394 ZBTB40Q9NUA8 1239 aa8.55□□□□□ -1.04
MSH2-204ENST00000461394 PDZRN3Q9UPQ7 1066 aa8.55□□□□□ -1.04
MSH2-204ENST00000461394 COL5A2P05997 1499 aaPredicted RBP8.55□□□□□ -1.04
MSH2-204ENST00000461394 LTBP4Q8N2S1 1624 aa8.54□□□□□ -1.04
MSH2-204ENST00000461394 KCNQ3O43525 872 aa8.54□□□□□ -1.04
MSH2-204ENST00000461394 ANP32AP39687 249 aaKnown RBP8.54□□□□□ -1.04
MSH2-204ENST00000461394 CCT4P50991 539 aaKnown RBP8.54□□□□□ -1.04
MSH2-204ENST00000461394 CABP4P57796 275 aa8.54□□□□□ -1.04
MSH2-204ENST00000461394 EIF4A1P60842 406 aaKnown RBP8.54□□□□□ -1.04
MSH2-204ENST00000461394 FLIIQ13045 1269 aa8.54□□□□□ -1.04
MSH2-204ENST00000461394 G2E3Q7L622 706 aa8.54□□□□□ -1.04
MSH2-204ENST00000461394 NPM2Q86SE8 214 aaKnown RBP8.54□□□□□ -1.04
MSH2-204ENST00000461394 TTC5Q8N0Z6 440 aa8.54□□□□□ -1.04
MSH2-204ENST00000461394 USP35Q9P2H5 1018 aa8.54□□□□□ -1.04
MSH2-204ENST00000461394 ADAMTS7Q9UKP4 1686 aa8.53□□□□□ -1.04
MSH2-204ENST00000461394 F6X3S4 739 aa8.53□□□□□ -1.04
MSH2-204ENST00000461394 ZBTB7BO15156 539 aaPredicted RBP8.53□□□□□ -1.04
MSH2-204ENST00000461394 GTPBP6O43824 516 aaPredicted RBP8.53□□□□□ -1.04
MSH2-204ENST00000461394 IL2RBP14784 551 aa8.53□□□□□ -1.04
MSH2-204ENST00000461394 HDAC1Q13547 482 aaPredicted RBP8.53□□□□□ -1.04
MSH2-204ENST00000461394 INTS3Q68E01 1043 aaKnown RBP8.53□□□□□ -1.04
MSH2-204ENST00000461394 LARP1Q6PKG0 1096 aaKnown RBP8.53□□□□□ -1.04
MSH2-204ENST00000461394 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
MSH2-204ENST00000461394 DCAF5Q96JK2 942 aa8.53□□□□□ -1.04
MSH2-204ENST00000461394 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
MSH2-204ENST00000461394 BTG4Q9NY30 223 aa8.53□□□□□ -1.04
MSH2-204ENST00000461394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.53□□□□□ -1.042e-6■■■■□ 23.7
MSH2-204ENST00000461394 COL22A1Q8NFW1 1626 aaPredicted RBP8.53□□□□□ -1.04
MSH2-204ENST00000461394 N4BP2Q86UW6 1770 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms