RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 FLT4P35916 1363 aa16.37■□□□□ 0.21
PCYT1A-213ENST00000460827 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
PCYT1A-213ENST00000460827 BRCA1P38398 1863 aaKnown RBP16.36■□□□□ 0.21
PCYT1A-213ENST00000460827 MMP10P09238 476 aa16.36■□□□□ 0.21
PCYT1A-213ENST00000460827 ITPK1Q13572 414 aa16.36■□□□□ 0.21
PCYT1A-213ENST00000460827 WDR90Q96KV7 1748 aa16.36■□□□□ 0.21
PCYT1A-213ENST00000460827 GNPATO15228 680 aa16.35■□□□□ 0.21
PCYT1A-213ENST00000460827 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
PCYT1A-213ENST00000460827 KIF20BQ96Q89 1820 aa16.35■□□□□ 0.21
PCYT1A-213ENST00000460827 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
PCYT1A-213ENST00000460827 ASAP1Q9ULH1 1129 aa16.34■□□□□ 0.21
PCYT1A-213ENST00000460827 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
PCYT1A-213ENST00000460827 BCS1LQ9Y276 419 aa16.33■□□□□ 0.2
PCYT1A-213ENST00000460827 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
PCYT1A-213ENST00000460827 TGFB2P61812 414 aa16.32■□□□□ 0.2
PCYT1A-213ENST00000460827 ATP6V1AP38606 617 aa16.31■□□□□ 0.2
PCYT1A-213ENST00000460827 ARHGAP27Q6ZUM4 889 aa16.31■□□□□ 0.2
PCYT1A-213ENST00000460827 TMOD3Q9NYL9 352 aa16.31■□□□□ 0.2
PCYT1A-213ENST00000460827 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
PCYT1A-213ENST00000460827 ARFGEF1Q9Y6D6 1849 aa16.31■□□□□ 0.2
PCYT1A-213ENST00000460827 SLC24A1O60721 1099 aa16.3■□□□□ 0.2
PCYT1A-213ENST00000460827 CAPN15O75808 1086 aa16.3■□□□□ 0.2
PCYT1A-213ENST00000460827 HTRA3P83110 453 aa16.3■□□□□ 0.2
PCYT1A-213ENST00000460827 COL13A1Q5TAT6 717 aaPredicted RBP16.3■□□□□ 0.2
PCYT1A-213ENST00000460827 RBM46Q8TBY0 533 aaKnown RBP16.3■□□□□ 0.2
PCYT1A-213ENST00000460827 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
PCYT1A-213ENST00000460827 ATG3Q9NT62 314 aa16.3■□□□□ 0.2
PCYT1A-213ENST00000460827 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
PCYT1A-213ENST00000460827 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
PCYT1A-213ENST00000460827 C4AP0C0L4 1744 aa16.29■□□□□ 0.2
PCYT1A-213ENST00000460827 DPEP1P16444 411 aa16.29■□□□□ 0.2
PCYT1A-213ENST00000460827 JMYQ8N9B5 988 aa16.29■□□□□ 0.2
PCYT1A-213ENST00000460827 KLRG1Q96E93 195 aa16.29■□□□□ 0.2
PCYT1A-213ENST00000460827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.26e-9■■■■■ 40
PCYT1A-213ENST00000460827 MYH14Q7Z406 1995 aaKnown RBP16.29■□□□□ 0.2
PCYT1A-213ENST00000460827 KDRP35968 1356 aa16.28■□□□□ 0.2
PCYT1A-213ENST00000460827 TONSLQ96HA7 1378 aa16.28■□□□□ 0.2
PCYT1A-213ENST00000460827 ZNF831Q5JPB2 1677 aa16.28■□□□□ 0.2
PCYT1A-213ENST00000460827 TMF1P82094 1093 aa16.28■□□□□ 0.2
PCYT1A-213ENST00000460827 NLGN1Q8N2Q7 840 aa16.28■□□□□ 0.2
PCYT1A-213ENST00000460827 SLC4A9Q96Q91 983 aa16.28■□□□□ 0.2
PCYT1A-213ENST00000460827 FCHSD2O94868 740 aa16.27■□□□□ 0.2
PCYT1A-213ENST00000460827 KCNA3P22001 575 aa16.27■□□□□ 0.2
PCYT1A-213ENST00000460827 C9orf131Q5VYM1 1079 aa16.27■□□□□ 0.2
PCYT1A-213ENST00000460827 COL5A3P25940 1745 aaPredicted RBP16.27■□□□□ 0.19
PCYT1A-213ENST00000460827 GYS1P13807 737 aa16.26■□□□□ 0.19
PCYT1A-213ENST00000460827 PHKG2P15735 406 aa16.26■□□□□ 0.19
PCYT1A-213ENST00000460827 TRAPPC3LQ5T215 181 aa16.26■□□□□ 0.19
PCYT1A-213ENST00000460827 ARHGEF1Q92888 912 aaKnown RBP16.26■□□□□ 0.19
PCYT1A-213ENST00000460827 EYA1Q99502 592 aa16.26■□□□□ 0.19
PCYT1A-213ENST00000460827 RTCBQ9Y3I0 505 aaKnown RBP16.26■□□□□ 0.19
PCYT1A-213ENST00000460827 SBF1O95248 1867 aa16.26■□□□□ 0.19
PCYT1A-213ENST00000460827 FSTL1Q12841 308 aa16.25■□□□□ 0.19
PCYT1A-213ENST00000460827 IFNL2Q8IZJ0 200 aa16.25■□□□□ 0.19
PCYT1A-213ENST00000460827 CARD14Q9BXL6 1004 aa16.25■□□□□ 0.19
PCYT1A-213ENST00000460827 CCDC87Q9NVE4 849 aa16.25■□□□□ 0.19
PCYT1A-213ENST00000460827 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
PCYT1A-213ENST00000460827 WASHC2AQ641Q2 1341 aa16.24■□□□□ 0.19
PCYT1A-213ENST00000460827 DSG3P32926 999 aa16.24■□□□□ 0.19
PCYT1A-213ENST00000460827 RC3H1Q5TC82 1133 aaKnown RBP16.24■□□□□ 0.19
PCYT1A-213ENST00000460827 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
PCYT1A-213ENST00000460827 PPM1GO15355 546 aaPredicted RBP16.23■□□□□ 0.19
PCYT1A-213ENST00000460827 CNTNAP4Q9C0A0 1308 aa16.22■□□□□ 0.19
PCYT1A-213ENST00000460827 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
PCYT1A-213ENST00000460827 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
PCYT1A-213ENST00000460827 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
PCYT1A-213ENST00000460827 TNRC6CQ9HCJ0 1690 aaKnown RBP16.21■□□□□ 0.19
PCYT1A-213ENST00000460827 RFC4P35249 363 aa16.21■□□□□ 0.19
PCYT1A-213ENST00000460827 PARP3Q9Y6F1 533 aa16.21■□□□□ 0.19
PCYT1A-213ENST00000460827 KDM2BQ8NHM5 1336 aa16.2■□□□□ 0.18
PCYT1A-213ENST00000460827 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
PCYT1A-213ENST00000460827 PIM2Q9P1W9 311 aa16.2■□□□□ 0.18
PCYT1A-213ENST00000460827 ERVV-2B6SEH9 535 aa16.19■□□□□ 0.18
PCYT1A-213ENST00000460827 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
PCYT1A-213ENST00000460827 TNS4Q8IZW8 715 aa16.19■□□□□ 0.18
PCYT1A-213ENST00000460827 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
PCYT1A-213ENST00000460827 RNF181Q9P0P0 153 aa16.19■□□□□ 0.18
PCYT1A-213ENST00000460827 PRELPP51888 382 aa16.18■□□□□ 0.18
PCYT1A-213ENST00000460827 DDR1Q08345 913 aa16.18■□□□□ 0.18
PCYT1A-213ENST00000460827 POLKQ9UBT6 870 aa16.18■□□□□ 0.18
PCYT1A-213ENST00000460827 ADAMTS7Q9UKP4 1686 aa16.16■□□□□ 0.18
PCYT1A-213ENST00000460827 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
PCYT1A-213ENST00000460827 FKBP8Q14318 412 aa16.16■□□□□ 0.18
PCYT1A-213ENST00000460827 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
PCYT1A-213ENST00000460827 SRP68Q9UHB9 627 aaKnown RBP16.16■□□□□ 0.18
PCYT1A-213ENST00000460827 KDM6AO15550 1401 aaPredicted RBP16.16■□□□□ 0.18
PCYT1A-213ENST00000460827 CHRNA5P30532 468 aa16.15■□□□□ 0.18
PCYT1A-213ENST00000460827 SMC1BQ8NDV3 1235 aa16.15■□□□□ 0.18
PCYT1A-213ENST00000460827 USP42Q9H9J4 1324 aaKnown RBP16.15■□□□□ 0.18
PCYT1A-213ENST00000460827 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
PCYT1A-213ENST00000460827 TJP1Q07157 1748 aa16.14■□□□□ 0.17
PCYT1A-213ENST00000460827 CCDC88AQ3V6T2 1871 aa16.13■□□□□ 0.17
PCYT1A-213ENST00000460827 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
PCYT1A-213ENST00000460827 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
PCYT1A-213ENST00000460827 HSP90AB1P08238 724 aaKnown RBP16.12■□□□□ 0.17
PCYT1A-213ENST00000460827 TM4SF1P30408 202 aa16.12■□□□□ 0.17
PCYT1A-213ENST00000460827 ZC3H4Q9UPT8 1303 aaKnown RBP16.12■□□□□ 0.17
PCYT1A-213ENST00000460827 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
PCYT1A-213ENST00000460827 CABP4P57796 275 aa16.11■□□□□ 0.17
PCYT1A-213ENST00000460827 RASSF7Q02833 373 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms