RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 OSBPL3Q9H4L5 887 aa5.14□□□□□ -1.59
HPS3-203ENST00000460822 ITGA6P23229 1130 aa5.13□□□□□ -1.59
HPS3-203ENST00000460822 CLN3Q13286 438 aa5.13□□□□□ -1.59
HPS3-203ENST00000460822 MAP7D1Q3KQU3 841 aa5.13□□□□□ -1.59
HPS3-203ENST00000460822 CDCA7Q9BWT1 371 aaPredicted RBP5.13□□□□□ -1.59
HPS3-203ENST00000460822 COL25A1Q9BXS0 654 aaPredicted RBP5.13□□□□□ -1.59
HPS3-203ENST00000460822 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
HPS3-203ENST00000460822 MARSP56192 900 aaKnown RBP5.13□□□□□ -1.59
HPS3-203ENST00000460822 VWA5B2Q8N398 1253 aa5.13□□□□□ -1.59
HPS3-203ENST00000460822 SCARF2Q96GP6 870 aaPredicted RBP5.13□□□□□ -1.59
HPS3-203ENST00000460822 RAB6BQ9NRW1 208 aa5.13□□□□□ -1.59
HPS3-203ENST00000460822 PHTF2Q8N3S3 785 aa5.12□□□□□ -1.59
HPS3-203ENST00000460822 ADAM23O75077 832 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 PPP1R15AO75807 674 aaPredicted RBP5.11□□□□□ -1.59
HPS3-203ENST00000460822 POU4F2Q12837 409 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 FOXR1Q6PIV2 292 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 RIPOR1Q6ZS17 1223 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 SVOPQ8N4V2 548 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 PLPP7Q8NBV4 271 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 CNKSR1Q969H4 720 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 GAS2L1Q99501 681 aaPredicted RBP5.11□□□□□ -1.59
HPS3-203ENST00000460822 ESYT1Q9BSJ8 1104 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 GNASQ5JWF2 1037 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 TMEM214Q6NUQ4 689 aaKnown RBP5.11□□□□□ -1.59
HPS3-203ENST00000460822 TAS1R3Q7RTX0 852 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 ZSCAN10Q96SZ4 725 aaPredicted RBP5.11□□□□□ -1.59
HPS3-203ENST00000460822 GRIP2Q9C0E4 1043 aa5.11□□□□□ -1.59
HPS3-203ENST00000460822 H7C1W4 665 aa5.1□□□□□ -1.59
HPS3-203ENST00000460822 SKIP12755 728 aa5.1□□□□□ -1.59
HPS3-203ENST00000460822 CENPCQ03188 943 aa5.1□□□□□ -1.59
HPS3-203ENST00000460822 TSGA10IPQ3SY00 556 aa5.1□□□□□ -1.59
HPS3-203ENST00000460822 WHAMMQ8TF30 809 aa5.1□□□□□ -1.59
HPS3-203ENST00000460822 GMCL1Q96IK5 515 aa5.1□□□□□ -1.59
HPS3-203ENST00000460822 TIMMDC1Q9NPL8 285 aa5.1□□□□□ -1.59
HPS3-203ENST00000460822 WASLO00401 505 aaPredicted RBP5.09□□□□□ -1.59
HPS3-203ENST00000460822 EML3Q32P44 896 aa5.09□□□□□ -1.59
HPS3-203ENST00000460822 NBPF10Q6P3W6 841 aaKnown RBP5.09□□□□□ -1.59
HPS3-203ENST00000460822 NBPF15Q8N660 670 aa5.09□□□□□ -1.59
HPS3-203ENST00000460822 XAGE2Q96GT9 111 aa5.09□□□□□ -1.59
HPS3-203ENST00000460822 DYRK1BQ9Y463 629 aa5.09□□□□□ -1.59
HPS3-203ENST00000460822 ACIN1Q9UKV3 1341 aaKnown RBP5.09□□□□□ -1.59
HPS3-203ENST00000460822 SENP3-EIF4A1A0A087X0R7 540 aa5.09□□□□□ -1.6
HPS3-203ENST00000460822 SPATA31C2B4DYI2 1134 aa5.09□□□□□ -1.6
HPS3-203ENST00000460822 LZTS3O60299 673 aaPredicted RBP5.09□□□□□ -1.6
HPS3-203ENST00000460822 IL2RAP01589 272 aa5.09□□□□□ -1.6
HPS3-203ENST00000460822 WDR44Q5JSH3 913 aa5.09□□□□□ -1.6
HPS3-203ENST00000460822 RNFT1Q5M7Z0 435 aa5.09□□□□□ -1.6
HPS3-203ENST00000460822 ADAMTS19Q8TE59 1207 aa5.09□□□□□ -1.6
HPS3-203ENST00000460822 MSTNO14793 375 aa5.08□□□□□ -1.6
HPS3-203ENST00000460822 RFX1P22670 979 aa5.08□□□□□ -1.6
HPS3-203ENST00000460822 HDGFL1Q5TGJ6 251 aa5.08□□□□□ -1.6
HPS3-203ENST00000460822 TMCO4Q5TGY1 634 aa5.08□□□□□ -1.6
HPS3-203ENST00000460822 CHIC2Q9UKJ5 165 aa5.08□□□□□ -1.6
HPS3-203ENST00000460822 NOD1Q9Y239 953 aa5.08□□□□□ -1.6
HPS3-203ENST00000460822 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.07□□□□□ -1.6
HPS3-203ENST00000460822 PHKA2P46019 1235 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 TLR1Q15399 786 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 TRIM22Q8IYM9 498 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 PBXIP1Q96AQ6 731 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 TRERF1Q96PN7 1200 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 GZF1Q9H116 711 aaPredicted RBP5.07□□□□□ -1.6
HPS3-203ENST00000460822 ALG2Q9H553 416 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 F11P03951 625 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 CSB-PGBD3P0DP91 1061 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 GDF10P55107 478 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 PSME1Q06323 249 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 PGBD3Q8N328 593 aa5.07□□□□□ -1.6
HPS3-203ENST00000460822 NFATC2IPQ8NCF5 419 aa5.06□□□□□ -1.6
HPS3-203ENST00000460822 RHBDD1Q8TEB9 315 aa5.06□□□□□ -1.6
HPS3-203ENST00000460822 ETNK1Q9HBU6 452 aa5.06□□□□□ -1.6
HPS3-203ENST00000460822 A0A1B0GTH6 734 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 PIK3CDO00329 1044 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 INHAP05111 366 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 CFAP70Q5T0N1 1121 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 ZNF837Q96EG3 531 aaPredicted RBP5.05□□□□□ -1.6
HPS3-203ENST00000460822 NUCKS1Q9H1E3 243 aaKnown RBP5.05□□□□□ -1.6
HPS3-203ENST00000460822 SERTAD1Q9UHV2 236 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 BACH1O14867 736 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 PDE4CQ08493 712 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 DBN1Q16643 649 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 PLA2G4EQ3MJ16 856 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 TRIM50Q86XT4 487 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 GTPBP3Q969Y2 492 aaKnown RBP5.05□□□□□ -1.6
HPS3-203ENST00000460822 FHDC1Q9C0D6 1143 aaPredicted RBP5.05□□□□□ -1.6
HPS3-203ENST00000460822 GPAMQ9HCL2 828 aa5.05□□□□□ -1.6
HPS3-203ENST00000460822 CUEDC1Q9NWM3 386 aaPredicted RBP5.05□□□□□ -1.6
HPS3-203ENST00000460822 NSFL1CQ9UNZ2 370 aaKnown RBP5.05□□□□□ -1.6
HPS3-203ENST00000460822 STAU1O95793 577 aaKnown RBP5.04□□□□□ -1.6
HPS3-203ENST00000460822 MFAP1P55081 439 aaKnown RBP5.04□□□□□ -1.6
HPS3-203ENST00000460822 GTF2IP78347 998 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 C4orf17Q53FE4 359 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 LYPD4Q6UWN0 246 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 PPARGC1BQ86YN6 1023 aaKnown RBP5.04□□□□□ -1.6
HPS3-203ENST00000460822 RGS22Q8NE09 1264 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 SPOCK3Q9BQ16 436 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 PPP1R12CQ9BZL4 782 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 RBM19Q9Y4C8 960 aaKnown RBP5.04□□□□□ -1.6
HPS3-203ENST00000460822 HRH3Q9Y5N1 445 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 USP17L5A8MUK1 530 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms