RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 KIF14Q15058 1648 aa10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 ZSCAN30Q86W11 494 aa10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 ZSCAN29Q8IWY8 852 aaPredicted RBP10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 ALS2CR12Q96Q35 445 aa10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 ERICH4A6NGS2 130 aa10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 SSBP05455 408 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 TUBBP07437 444 aa10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 TWISTNBQ3B726 338 aaPredicted RBP10.33□□□□□ -0.76
SHROOM4-203ENST00000460112 CTAGE5O15320 804 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 CCDC12Q8WUD4 166 aaPredicted RBP10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 BACH2Q9BYV9 841 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 HDGFL1Q5TGJ6 251 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 LARP1BQ659C4 914 aaKnown RBP10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 AIDAQ96BJ3 306 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 DDX23Q9BUQ8 820 aaKnown RBP10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 PIBF1Q8WXW3 757 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 ESPNB1AK53 854 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 PRPF40AO75400 957 aaKnown RBP10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 FERMT2Q96AC1 680 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 CFAP65Q6ZU64 1925 aaKnown RBP10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 KIF5CO60282 957 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 BLOC1S2Q6QNY1 142 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 U3KPZ7 1027 aaPredicted RBP10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 RNF214Q8ND24 703 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 NUP62CLQ9H1M0 184 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 NAA15Q9BXJ9 866 aaKnown RBP10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 PDRG1Q9NUG6 133 aa10.32□□□□□ -0.76
SHROOM4-203ENST00000460112 C6orf163Q5TEZ5 329 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 THEMISQ8N1K5 641 aaPredicted RBP10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 FAM114A1Q8IWE2 563 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 STARD3NLO95772 234 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 FAM69CQ0P6D2 419 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 DNMBPQ6XZF7 1577 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 LUZP1Q86V48 1076 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 GPATCH11Q8N954 259 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 RAI14Q9P0K7 980 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 K7ELQ4 463 aaPredicted RBP10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 PPP4R3BQ5MIZ7 849 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 TMCO3Q6UWJ1 677 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 COMMD10Q9Y6G5 202 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 GSTTP1A0A1W2PQM5 241 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 FAM193AP78312 1265 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 TOM1L2Q6ZVM7 507 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 NCAPD3P42695 1498 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 GRIN2BQ13224 1484 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 CEBPZQ03701 1054 aaKnown RBP10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 HS1BP3Q53T59 392 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 CAVIN4Q5BKX8 364 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 LRP2BPQ9P2M1 347 aa10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 CGNQ9P2M7 1197 aaKnown RBP10.31□□□□□ -0.76
SHROOM4-203ENST00000460112 A0A087WZG4 1122 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 CCDC172P0C7W6 258 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 IFFO1Q0D2I5 559 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 BIVM-ERCC5R4GMW8 1640 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 LRRC27Q9C0I9 530 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 USO1O60763 962 aaKnown RBP10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 PROSER2Q86WR7 435 aaPredicted RBP10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 PANK1Q8TE04 598 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 NKTRP30414 1462 aaKnown RBP10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 LARP1Q6PKG0 1096 aaKnown RBP10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 AACSQ86V21 672 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 SPC24Q8NBT2 197 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 EHBP1Q8NDI1 1231 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 STRN4Q9NRL3 753 aa10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 V9GYY5 206 aaPredicted RBP10.3□□□□□ -0.76
SHROOM4-203ENST00000460112 CTNNA2P26232 953 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 TTC12Q9H892 705 aaPredicted RBP10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 NSD2O96028 1365 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 MTHFSP49914 203 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 SPECC1LQ69YQ0 1117 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 ATF7IPQ6VMQ6 1270 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 USP37Q86T82 979 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 CRACR2BQ8N4Y2 399 aaPredicted RBP10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 RNF41Q9H4P4 317 aaPredicted RBP10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 CEP126Q9P2H0 1117 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 RAB11FIP3O75154 756 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 BAG4O95429 457 aaKnown RBP10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 SFPQP23246 707 aaKnown RBP eCLIP10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 CACNA2D4Q7Z3S7 1137 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 KDM4AO75164 1064 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 MAP3K11Q16584 847 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 PLVAPQ9BX97 442 aa10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 SCAND2PQ9GZW5 306 aaPredicted RBP10.29□□□□□ -0.76
SHROOM4-203ENST00000460112 CASQ1P31415 396 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 GSDMDP57764 484 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 AMPD3Q01432 767 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 PRIMPOLQ96LW4 560 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 RPGRIP1LQ68CZ1 1315 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 FKBP4Q02790 459 aaKnown RBP eCLIP10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 IFI16Q16666 785 aaKnown RBP10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 ZNF530Q6P9A1 599 aaPredicted RBP10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 ZPR1O75312 459 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 KIF4AO95239 1232 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 CABP2Q9NPB3 220 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 DYNC1I1O14576 645 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 CTR9Q6PD62 1173 aa10.28□□□□□ -0.76
SHROOM4-203ENST00000460112 UBXN4Q92575 508 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms