RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 IL13P35225 146 aa20.85■□□□□ 0.93
CROCCP4-201ENST00000457096 CC2D1BQ5T0F9 858 aaKnown RBP20.85■□□□□ 0.93
CROCCP4-201ENST00000457096 ZNF784Q8NCA9 323 aaPredicted RBP20.85■□□□□ 0.93
CROCCP4-201ENST00000457096 GOLGB1Q14789 3259 aaKnown RBP20.84■□□□□ 0.93
CROCCP4-201ENST00000457096 UBR3Q6ZT12 1888 aa20.84■□□□□ 0.93
CROCCP4-201ENST00000457096 GNPATO15228 680 aa20.84■□□□□ 0.93
CROCCP4-201ENST00000457096 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.93
CROCCP4-201ENST00000457096 RBM42Q9BTD8 480 aaKnown RBP20.84■□□□□ 0.93
CROCCP4-201ENST00000457096 WWC3Q9ULE0 1092 aa20.84■□□□□ 0.93
CROCCP4-201ENST00000457096 MTHFSP49914 203 aa20.83■□□□□ 0.93
CROCCP4-201ENST00000457096 PER1O15534 1290 aaPredicted RBP20.82■□□□□ 0.92
CROCCP4-201ENST00000457096 FLAD1Q8NFF5 587 aa20.82■□□□□ 0.92
CROCCP4-201ENST00000457096 DCAF5Q96JK2 942 aa20.82■□□□□ 0.92
CROCCP4-201ENST00000457096 KDRP35968 1356 aa20.82■□□□□ 0.92
CROCCP4-201ENST00000457096 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
CROCCP4-201ENST00000457096 HMOX1P09601 288 aa20.81■□□□□ 0.92
CROCCP4-201ENST00000457096 CABP4P57796 275 aa20.81■□□□□ 0.92
CROCCP4-201ENST00000457096 SSFA2P28290 1259 aa20.79■□□□□ 0.92
CROCCP4-201ENST00000457096 AMOTQ4VCS5 1084 aa20.79■□□□□ 0.92
CROCCP4-201ENST00000457096 PTCD1O75127 700 aaKnown RBP20.78■□□□□ 0.92
CROCCP4-201ENST00000457096 HSP90AB1P08238 724 aaKnown RBP20.78■□□□□ 0.92
CROCCP4-201ENST00000457096 C1orf141Q5JVX7 400 aa20.78■□□□□ 0.92
CROCCP4-201ENST00000457096 NFATC2IPQ8NCF5 419 aa20.78■□□□□ 0.92
CROCCP4-201ENST00000457096 PLEKHG2Q9H7P9 1386 aa20.77■□□□□ 0.92
CROCCP4-201ENST00000457096 LGR6Q9HBX8 967 aa20.76■□□□□ 0.91
CROCCP4-201ENST00000457096 CHD4Q14839 1912 aa20.75■□□□□ 0.91
CROCCP4-201ENST00000457096 CD2APQ9Y5K6 639 aa20.74■□□□□ 0.91
CROCCP4-201ENST00000457096 RTCBQ9Y3I0 505 aaKnown RBP20.73■□□□□ 0.91
CROCCP4-201ENST00000457096 MMP10P09238 476 aa20.72■□□□□ 0.91
CROCCP4-201ENST00000457096 HMGB2P26583 209 aaKnown RBP20.72■□□□□ 0.91
CROCCP4-201ENST00000457096 ARHGEF1Q92888 912 aaKnown RBP20.72■□□□□ 0.91
CROCCP4-201ENST00000457096 COL5A3P25940 1745 aaPredicted RBP20.72■□□□□ 0.91
CROCCP4-201ENST00000457096 MTHFSDQ2M296 383 aaKnown RBP20.71■□□□□ 0.91
CROCCP4-201ENST00000457096 TRAPPC3LQ5T215 181 aa20.71■□□□□ 0.91
CROCCP4-201ENST00000457096 DIAPH1O60610 1272 aaKnown RBP20.7■□□□□ 0.9
CROCCP4-201ENST00000457096 SLC39A6Q13433 755 aa20.7■□□□□ 0.9
CROCCP4-201ENST00000457096 AKAP4Q5JQC9 854 aa20.7■□□□□ 0.9
CROCCP4-201ENST00000457096 RNMTO43148 476 aaKnown RBP20.69■□□□□ 0.9
CROCCP4-201ENST00000457096 CRKLP46109 303 aaKnown RBP20.69■□□□□ 0.9
CROCCP4-201ENST00000457096 CNTNAP4Q9C0A0 1308 aa20.69■□□□□ 0.9
CROCCP4-201ENST00000457096 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
CROCCP4-201ENST00000457096 COL3A1P02461 1466 aaPredicted RBP20.69■□□□□ 0.9
CROCCP4-201ENST00000457096 MYH14Q7Z406 1995 aaKnown RBP20.68■□□□□ 0.9
CROCCP4-201ENST00000457096 RPS6KA4O75676 772 aa20.68■□□□□ 0.9
CROCCP4-201ENST00000457096 RC3H1Q5TC82 1133 aaKnown RBP20.68■□□□□ 0.9
CROCCP4-201ENST00000457096 SLC52A2Q9HAB3 445 aa20.68■□□□□ 0.9
CROCCP4-201ENST00000457096 SRP68Q9UHB9 627 aaKnown RBP20.68■□□□□ 0.9
CROCCP4-201ENST00000457096 ZNF831Q5JPB2 1677 aa20.67■□□□□ 0.9
CROCCP4-201ENST00000457096 TJP1Q07157 1748 aa20.67■□□□□ 0.9
CROCCP4-201ENST00000457096 GRIN3BO60391 1043 aa20.67■□□□□ 0.9
CROCCP4-201ENST00000457096 GYS1P13807 737 aa20.67■□□□□ 0.9
CROCCP4-201ENST00000457096 DNAJC10Q8IXB1 793 aa20.67■□□□□ 0.9
CROCCP4-201ENST00000457096 CICQ96RK0 1608 aaPredicted RBP20.67■□□□□ 0.9
CROCCP4-201ENST00000457096 U2SURPO15042 1029 aaKnown RBP20.66■□□□□ 0.9
CROCCP4-201ENST00000457096 RFC4P35249 363 aa20.66■□□□□ 0.9
CROCCP4-201ENST00000457096 C4AP0C0L4 1744 aa20.64■□□□□ 0.9
CROCCP4-201ENST00000457096 INTS5Q6P9B9 1019 aaKnown RBP20.64■□□□□ 0.89
CROCCP4-201ENST00000457096 A0A0G2JLW4 131 aa20.63■□□□□ 0.89
CROCCP4-201ENST00000457096 PXDNLA1KZ92 1463 aa20.62■□□□□ 0.89
CROCCP4-201ENST00000457096 MRC1P22897 1456 aa20.62■□□□□ 0.89
CROCCP4-201ENST00000457096 NPC1L1Q9UHC9 1359 aa20.62■□□□□ 0.89
CROCCP4-201ENST00000457096 FKBP8Q14318 412 aa20.62■□□□□ 0.89
CROCCP4-201ENST00000457096 NLGN1Q8N2Q7 840 aa20.62■□□□□ 0.89
CROCCP4-201ENST00000457096 ADRA2BP18089 450 aa20.61■□□□□ 0.89
CROCCP4-201ENST00000457096 KCPQ6ZWJ8 1503 aa20.61■□□□□ 0.89
CROCCP4-201ENST00000457096 N4BP2Q86UW6 1770 aaPredicted RBP20.61■□□□□ 0.89
CROCCP4-201ENST00000457096 KIAA1551Q9HCM1 1747 aa20.61■□□□□ 0.89
CROCCP4-201ENST00000457096 C1QTNF8P60827 252 aa20.6■□□□□ 0.89
CROCCP4-201ENST00000457096 C10orf71Q711Q0 1435 aa20.6■□□□□ 0.89
CROCCP4-201ENST00000457096 ATP10DQ9P241 1426 aa20.6■□□□□ 0.89
CROCCP4-201ENST00000457096 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
CROCCP4-201ENST00000457096 USP42Q9H9J4 1324 aaKnown RBP20.59■□□□□ 0.89
CROCCP4-201ENST00000457096 CYP19A1P11511 503 aaPredicted RBP20.59■□□□□ 0.89
CROCCP4-201ENST00000457096 DDR1Q08345 913 aa20.59■□□□□ 0.89
CROCCP4-201ENST00000457096 ZNF526Q8TF50 670 aaPredicted RBP20.59■□□□□ 0.89
CROCCP4-201ENST00000457096 ADAMTS7Q9UKP4 1686 aa20.58■□□□□ 0.89
CROCCP4-201ENST00000457096 DPEP1P16444 411 aa20.58■□□□□ 0.89
CROCCP4-201ENST00000457096 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.89
CROCCP4-201ENST00000457096 CCDC87Q9NVE4 849 aa20.58■□□□□ 0.89
CROCCP4-201ENST00000457096 PARP3Q9Y6F1 533 aa20.58■□□□□ 0.89
CROCCP4-201ENST00000457096 GIGYF1O75420 1035 aaPredicted RBP20.57■□□□□ 0.88
CROCCP4-201ENST00000457096 IL17REQ8NFR9 667 aa20.57■□□□□ 0.88
CROCCP4-201ENST00000457096 ZBTB1Q9Y2K1 713 aa20.57■□□□□ 0.88
CROCCP4-201ENST00000457096 USPL1Q5W0Q7 1092 aa20.56■□□□□ 0.88
CROCCP4-201ENST00000457096 BCS1LQ9Y276 419 aa20.56■□□□□ 0.88
CROCCP4-201ENST00000457096 SOS1Q07889 1333 aaPredicted RBP20.55■□□□□ 0.88
CROCCP4-201ENST00000457096 KIF13BQ9NQT8 1826 aa20.55■□□□□ 0.88
CROCCP4-201ENST00000457096 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
CROCCP4-201ENST00000457096 PRKAR2BP31323 418 aa20.55■□□□□ 0.88
CROCCP4-201ENST00000457096 PPP2R1AP30153 589 aa20.54■□□□□ 0.88
CROCCP4-201ENST00000457096 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
CROCCP4-201ENST00000457096 ADCY9O60503 1353 aa20.54■□□□□ 0.88
CROCCP4-201ENST00000457096 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
CROCCP4-201ENST00000457096 KCNQ3O43525 872 aa20.53■□□□□ 0.88
CROCCP4-201ENST00000457096 KCNA3P22001 575 aa20.53■□□□□ 0.88
CROCCP4-201ENST00000457096 TGFB2P61812 414 aa20.53■□□□□ 0.88
CROCCP4-201ENST00000457096 CANXP27824 592 aaKnown RBP20.52■□□□□ 0.88
CROCCP4-201ENST00000457096 CHRNA5P30532 468 aa20.52■□□□□ 0.88
CROCCP4-201ENST00000457096 ZNF496Q96IT1 587 aaPredicted RBP20.52■□□□□ 0.88
CROCCP4-201ENST00000457096 COL15A1P39059 1388 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms