RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 CEP152O94986 1710 aa10.41□□□□□ -0.74
LSMEM1-203ENST00000455302 COL16A1Q07092 1604 aaPredicted RBP10.4□□□□□ -0.74
LSMEM1-203ENST00000455302 MAST1Q9Y2H9 1570 aa10.4□□□□□ -0.74
LSMEM1-203ENST00000455302 VAC14Q08AM6 782 aa10.4□□□□□ -0.74
LSMEM1-203ENST00000455302 SPNS2Q8IVW8 549 aa10.4□□□□□ -0.74
LSMEM1-203ENST00000455302 ANKK1Q8NFD2 765 aa10.4□□□□□ -0.74
LSMEM1-203ENST00000455302 SALL2Q9Y467 1007 aaPredicted RBP10.4□□□□□ -0.74
LSMEM1-203ENST00000455302 CDK12Q9NYV4 1490 aaPredicted RBP10.4□□□□□ -0.74
LSMEM1-203ENST00000455302 TET3O43151 1660 aa10.4□□□□□ -0.74
LSMEM1-203ENST00000455302 KANK1Q14678 1352 aa10.39□□□□□ -0.75
LSMEM1-203ENST00000455302 NWD1Q149M9 1564 aa10.39□□□□□ -0.75
LSMEM1-203ENST00000455302 AFF2P51816 1311 aa10.39□□□□□ -0.75
LSMEM1-203ENST00000455302 DUOX2Q9NRD8 1548 aa10.39□□□□□ -0.75
LSMEM1-203ENST00000455302 PPP4CP60510 307 aa10.39□□□□□ -0.75
LSMEM1-203ENST00000455302 ADGRD1Q6QNK2 874 aa10.39□□□□□ -0.75
LSMEM1-203ENST00000455302 PBXIP1Q96AQ6 731 aa10.39□□□□□ -0.75
LSMEM1-203ENST00000455302 KIF15Q9NS87 1388 aa10.39□□□□□ -0.75
LSMEM1-203ENST00000455302 ATF3P18847 181 aa10.38□□□□□ -0.75
LSMEM1-203ENST00000455302 SEMA3FQ13275 785 aa10.38□□□□□ -0.75
LSMEM1-203ENST00000455302 NR6A1Q15406 480 aa10.38□□□□□ -0.75
LSMEM1-203ENST00000455302 PUS10Q3MIT2 529 aaKnown RBP10.38□□□□□ -0.75
LSMEM1-203ENST00000455302 ALG2Q9H553 416 aa10.38□□□□□ -0.75
LSMEM1-203ENST00000455302 EIF4G2P78344 907 aaKnown RBP eCLIP10.37□□□□□ -0.75
LSMEM1-203ENST00000455302 LSM11P83369 360 aaKnown RBP eCLIP10.37□□□□□ -0.75
LSMEM1-203ENST00000455302 LYPD8Q6UX82 237 aa10.37□□□□□ -0.75
LSMEM1-203ENST00000455302 RETREG2Q8NC44 543 aa10.37□□□□□ -0.75
LSMEM1-203ENST00000455302 USB1Q9BQ65 265 aaKnown RBP10.37□□□□□ -0.75
LSMEM1-203ENST00000455302 RRP7BPQ9NSQ0 103 aa10.37□□□□□ -0.75
LSMEM1-203ENST00000455302 RGS12O14924 1447 aa10.36□□□□□ -0.75
LSMEM1-203ENST00000455302 ERBINQ96RT1 1412 aa10.36□□□□□ -0.75
LSMEM1-203ENST00000455302 EPS8L1Q8TE68 723 aa10.36□□□□□ -0.75
LSMEM1-203ENST00000455302 PPP1R12CQ9BZL4 782 aa10.36□□□□□ -0.75
LSMEM1-203ENST00000455302 MYOM3Q5VTT5 1437 aa10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 NCOA3Q9Y6Q9 1424 aa10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 ADGRB3O60242 1522 aa10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 PER1O15534 1290 aaPredicted RBP10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 GPR37L1O60883 481 aa10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 NR1I2O75469 434 aa10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 FMNL1O95466 1100 aaPredicted RBP10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 RBM6P78332 1123 aaKnown RBP10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 ADAMTS19Q8TE59 1207 aa10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 C8orf37Q96NL8 207 aa10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 QTRT2Q9H974 415 aaKnown RBP10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 AHDC1Q5TGY3 1603 aaPredicted RBP10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 PLEKHG1Q9ULL1 1385 aa10.35□□□□□ -0.75
LSMEM1-203ENST00000455302 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 HRO43593 1189 aa10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 BRINP3Q76B58 766 aa10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 C19orf44Q9H6X5 657 aa10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 SLC52A1Q9NWF4 448 aa10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 TSR3Q9UJK0 312 aaKnown RBP10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 CCDC9Q9Y3X0 531 aaKnown RBP10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 CFAP65Q6ZU64 1925 aaKnown RBP10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
LSMEM1-203ENST00000455302 RFX1P22670 979 aa10.33□□□□□ -0.76
LSMEM1-203ENST00000455302 MMRN1Q13201 1228 aa10.33□□□□□ -0.76
LSMEM1-203ENST00000455302 BRICD5Q6PL45 260 aa10.33□□□□□ -0.76
LSMEM1-203ENST00000455302 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
LSMEM1-203ENST00000455302 ATAD2Q6PL18 1390 aa10.33□□□□□ -0.76
LSMEM1-203ENST00000455302 PATL2C9JE40 543 aaKnown RBP10.32□□□□□ -0.76
LSMEM1-203ENST00000455302 CSB-PGBD3P0DP91 1061 aa10.32□□□□□ -0.76
LSMEM1-203ENST00000455302 AEBP1Q8IUX7 1158 aa10.32□□□□□ -0.76
LSMEM1-203ENST00000455302 SCUBE3Q8IX30 993 aa10.32□□□□□ -0.76
LSMEM1-203ENST00000455302 NGLY1Q96IV0 654 aa10.32□□□□□ -0.76
LSMEM1-203ENST00000455302 TBX22Q9Y458 520 aa10.32□□□□□ -0.76
LSMEM1-203ENST00000455302 PCDHB3Q9Y5E6 796 aa10.32□□□□□ -0.76
LSMEM1-203ENST00000455302 NOS1P29475 1434 aa10.32□□□□□ -0.76
LSMEM1-203ENST00000455302 RIMS2Q9UQ26 1411 aa10.32□□□□□ -0.76
LSMEM1-203ENST00000455302 PALM3A6NDB9 673 aaPredicted RBP10.31□□□□□ -0.76
LSMEM1-203ENST00000455302 NR1H3Q13133 447 aa10.31□□□□□ -0.76
LSMEM1-203ENST00000455302 CFAP70Q5T0N1 1121 aa10.31□□□□□ -0.76
LSMEM1-203ENST00000455302 LMTK2Q8IWU2 1503 aa10.31□□□□□ -0.76
LSMEM1-203ENST00000455302 ZC3H4Q9UPT8 1303 aaKnown RBP10.31□□□□□ -0.76
LSMEM1-203ENST00000455302 BLOC1S3Q6QNY0 202 aa10.3□□□□□ -0.76
LSMEM1-203ENST00000455302 RNF19BQ6ZMZ0 732 aa10.3□□□□□ -0.76
LSMEM1-203ENST00000455302 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.3□□□□□ -0.76
LSMEM1-203ENST00000455302 ZNF592Q92610 1267 aa10.3□□□□□ -0.76
LSMEM1-203ENST00000455302 LRRC59Q96AG4 307 aaKnown RBP10.3□□□□□ -0.76
LSMEM1-203ENST00000455302 FKBPLQ9UIM3 349 aa10.3□□□□□ -0.76
LSMEM1-203ENST00000455302 USTQ9Y2C2 406 aa10.3□□□□□ -0.76
LSMEM1-203ENST00000455302 ZFYVE9O95405 1425 aa10.3□□□□□ -0.76
LSMEM1-203ENST00000455302 DIP2AQ14689 1571 aa10.3□□□□□ -0.76
LSMEM1-203ENST00000455302 ADAMTS2O95450 1211 aa10.29□□□□□ -0.76
LSMEM1-203ENST00000455302 JUNDP17535 347 aa10.29□□□□□ -0.76
LSMEM1-203ENST00000455302 LMOD1P29536 600 aaPredicted RBP10.29□□□□□ -0.76
LSMEM1-203ENST00000455302 PTPRNQ16849 979 aa10.29□□□□□ -0.76
LSMEM1-203ENST00000455302 ANKRD13DQ6ZTN6 518 aa10.29□□□□□ -0.76
LSMEM1-203ENST00000455302 WNT2BQ93097 391 aa10.29□□□□□ -0.76
LSMEM1-203ENST00000455302 TFIP11Q9UBB9 837 aaKnown RBP10.29□□□□□ -0.76
LSMEM1-203ENST00000455302 ABCC5O15440 1437 aa10.29□□□□□ -0.76
LSMEM1-203ENST00000455302 SETD5Q9C0A6 1442 aa10.29□□□□□ -0.76
LSMEM1-203ENST00000455302 ZBBXA8MT70 800 aa10.28□□□□□ -0.76
LSMEM1-203ENST00000455302 APLP1P51693 650 aa10.28□□□□□ -0.76
LSMEM1-203ENST00000455302 ARMC2Q8NEN0 867 aa10.28□□□□□ -0.76
LSMEM1-203ENST00000455302 CHIC2Q9UKJ5 165 aa10.28□□□□□ -0.76
LSMEM1-203ENST00000455302 ASXL1Q8IXJ9 1541 aa10.28□□□□□ -0.76
LSMEM1-203ENST00000455302 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.27□□□□□ -0.77
LSMEM1-203ENST00000455302 KANK4Q5T7N3 995 aaPredicted RBP10.27□□□□□ -0.77
LSMEM1-203ENST00000455302 THAP11Q96EK4 314 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms