RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 SBF2Q86WG5 1849 aa13.33□□□□□ -0.28
GTF3C2-206ENST00000454704 COL18A1P39060 1754 aa13.32□□□□□ -0.28
GTF3C2-206ENST00000454704 GNAI1P63096 354 aa13.32□□□□□ -0.28
GTF3C2-206ENST00000454704 NFE2L2Q16236 605 aa13.32□□□□□ -0.28
GTF3C2-206ENST00000454704 SSH1Q8WYL5 1049 aa13.32□□□□□ -0.28
GTF3C2-206ENST00000454704 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
GTF3C2-206ENST00000454704 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
GTF3C2-206ENST00000454704 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
GTF3C2-206ENST00000454704 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
GTF3C2-206ENST00000454704 IFT57Q9NWB7 429 aa13.31□□□□□ -0.28
GTF3C2-206ENST00000454704 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
GTF3C2-206ENST00000454704 ZBTB40Q9NUA8 1239 aa13.3□□□□□ -0.28
GTF3C2-206ENST00000454704 TSR2Q969E8 191 aaKnown RBP13.3□□□□□ -0.28
GTF3C2-206ENST00000454704 GCC1Q96CN9 775 aa13.3□□□□□ -0.28
GTF3C2-206ENST00000454704 BCL2L13Q9BXK5 485 aa13.3□□□□□ -0.28
GTF3C2-206ENST00000454704 POLKQ9UBT6 870 aa13.3□□□□□ -0.28
GTF3C2-206ENST00000454704 RGPD5Q99666 1765 aa13.29□□□□□ -0.28
GTF3C2-206ENST00000454704 DDB1Q16531 1140 aa13.29□□□□□ -0.28
GTF3C2-206ENST00000454704 ITPRIPQ8IWB1 547 aa13.29□□□□□ -0.28
GTF3C2-206ENST00000454704 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
GTF3C2-206ENST00000454704 SOX12O15370 315 aa13.28□□□□□ -0.28
GTF3C2-206ENST00000454704 PTF1AQ7RTS3 328 aa13.28□□□□□ -0.28
GTF3C2-206ENST00000454704 PPP1R1BQ9UD71 204 aaPredicted RBP13.28□□□□□ -0.28
GTF3C2-206ENST00000454704 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
GTF3C2-206ENST00000454704 WDR17Q8IZU2 1322 aa13.28□□□□□ -0.28
GTF3C2-206ENST00000454704 CASZ1Q86V15 1759 aa13.27□□□□□ -0.28
GTF3C2-206ENST00000454704 KCNQ2O43526 872 aa13.27□□□□□ -0.29
GTF3C2-206ENST00000454704 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
GTF3C2-206ENST00000454704 PRKAR2BP31323 418 aa13.27□□□□□ -0.29
GTF3C2-206ENST00000454704 SPON1Q9HCB6 807 aa13.27□□□□□ -0.29
GTF3C2-206ENST00000454704 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
GTF3C2-206ENST00000454704 TNNQ9UQP3 1299 aa13.27□□□□□ -0.29
GTF3C2-206ENST00000454704 NFAT5O94916 1531 aa13.26□□□□□ -0.29
GTF3C2-206ENST00000454704 IL13P35225 146 aa13.26□□□□□ -0.29
GTF3C2-206ENST00000454704 NUCB1Q02818 461 aa13.26□□□□□ -0.29
GTF3C2-206ENST00000454704 TMEM57Q8N5G2 664 aa13.26□□□□□ -0.29
GTF3C2-206ENST00000454704 MARCH10Q8NA82 808 aaPredicted RBP13.26□□□□□ -0.29
GTF3C2-206ENST00000454704 COG3Q96JB2 828 aa13.26□□□□□ -0.29
GTF3C2-206ENST00000454704 API5Q9BZZ5 524 aaKnown RBP13.26□□□□□ -0.29
GTF3C2-206ENST00000454704 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
GTF3C2-206ENST00000454704 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
GTF3C2-206ENST00000454704 PLSCR1O15162 318 aa13.25□□□□□ -0.29
GTF3C2-206ENST00000454704 SEC24BO95487 1268 aa13.25□□□□□ -0.29
GTF3C2-206ENST00000454704 SLC4A3P48751 1232 aa13.25□□□□□ -0.29
GTF3C2-206ENST00000454704 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
GTF3C2-206ENST00000454704 ABCC4O15439 1325 aa13.25□□□□□ -0.29
GTF3C2-206ENST00000454704 CSB-PGBD3P0DP91 1061 aa13.24□□□□□ -0.29
GTF3C2-206ENST00000454704 YY1P25490 414 aa13.24□□□□□ -0.29
GTF3C2-206ENST00000454704 C22orf23Q9BZE7 217 aa13.24□□□□□ -0.29
GTF3C2-206ENST00000454704 ANTXR1Q9H6X2 564 aa13.24□□□□□ -0.29
GTF3C2-206ENST00000454704 USP54Q70EL1 1684 aa13.24□□□□□ -0.29
GTF3C2-206ENST00000454704 BCL9O00512 1426 aa13.23□□□□□ -0.29
GTF3C2-206ENST00000454704 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
GTF3C2-206ENST00000454704 BMP2KLQ5H9B9 411 aa13.23□□□□□ -0.29
GTF3C2-206ENST00000454704 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
GTF3C2-206ENST00000454704 KCNH5Q8NCM2 988 aa13.23□□□□□ -0.29
GTF3C2-206ENST00000454704 CDCA7Q9BWT1 371 aaPredicted RBP13.23□□□□□ -0.29
GTF3C2-206ENST00000454704 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 VAMP4O75379 141 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 SNX21Q969T3 373 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 CARD10Q9BWT7 1032 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 PDGFDQ9GZP0 370 aaPredicted RBP13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 UTRNP46939 3433 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 ABCC6O95255 1503 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 TNS2Q63HR2 1409 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 FRAT2O75474 233 aaPredicted RBP13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 PTMSP20962 102 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 L1TD1Q5T7N2 865 aaKnown RBP13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 PROM2Q8N271 834 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 TBC1D2Q9BYX2 928 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 CHMP5Q9NZZ3 219 aa13.22□□□□□ -0.29
GTF3C2-206ENST00000454704 ZBTB7BO15156 539 aaPredicted RBP13.21□□□□□ -0.3
GTF3C2-206ENST00000454704 ZBTB7AO95365 584 aa13.21□□□□□ -0.3
GTF3C2-206ENST00000454704 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.3
GTF3C2-206ENST00000454704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.21□□□□□ -0.3
GTF3C2-206ENST00000454704 N4BP2Q86UW6 1770 aaPredicted RBP13.2□□□□□ -0.3
GTF3C2-206ENST00000454704 NHSQ6T4R5 1651 aa13.2□□□□□ -0.3
GTF3C2-206ENST00000454704 HSCBQ8IWL3 235 aa13.2□□□□□ -0.3
GTF3C2-206ENST00000454704 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
GTF3C2-206ENST00000454704 LTN1O94822 1766 aa13.19□□□□□ -0.3
GTF3C2-206ENST00000454704 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
GTF3C2-206ENST00000454704 TXNRD1Q16881 649 aa13.19□□□□□ -0.3
GTF3C2-206ENST00000454704 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
GTF3C2-206ENST00000454704 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
GTF3C2-206ENST00000454704 EXOC5O00471 708 aa13.18□□□□□ -0.3
GTF3C2-206ENST00000454704 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
GTF3C2-206ENST00000454704 ISY1Q9ULR0 285 aaKnown RBP13.18□□□□□ -0.3
GTF3C2-206ENST00000454704 PTGER2P43116 358 aa13.17□□□□□ -0.3
GTF3C2-206ENST00000454704 NME9Q86XW9 330 aa13.17□□□□□ -0.3
GTF3C2-206ENST00000454704 MBIPQ9NS73 344 aa13.17□□□□□ -0.3
GTF3C2-206ENST00000454704 EMILIN1Q9Y6C2 1016 aa13.17□□□□□ -0.3
GTF3C2-206ENST00000454704 PTPRCP08575 1304 aa13.16□□□□□ -0.3
GTF3C2-206ENST00000454704 ERBB3P21860 1342 aa13.16□□□□□ -0.3
GTF3C2-206ENST00000454704 ACSBG1Q96GR2 724 aa13.16□□□□□ -0.3
GTF3C2-206ENST00000454704 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
GTF3C2-206ENST00000454704 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
GTF3C2-206ENST00000454704 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
GTF3C2-206ENST00000454704 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
GTF3C2-206ENST00000454704 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms