RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 HSP90AB2PQ58FF8 381 aa14.64□□□□□ -0.07
USP41-202ENST00000454608 SMIM5Q71RC9 77 aa14.64□□□□□ -0.07
USP41-202ENST00000454608 C10orf71Q711Q0 1435 aa14.64□□□□□ -0.07
USP41-202ENST00000454608 ZNF831Q5JPB2 1677 aa14.64□□□□□ -0.07
USP41-202ENST00000454608 C4AP0C0L4 1744 aa14.63□□□□□ -0.07
USP41-202ENST00000454608 TNRC6CQ9HCJ0 1690 aaKnown RBP14.63□□□□□ -0.07
USP41-202ENST00000454608 A0A0G2JLW4 131 aa14.63□□□□□ -0.07
USP41-202ENST00000454608 ATP6V1AP38606 617 aa14.63□□□□□ -0.07
USP41-202ENST00000454608 CCDC87Q9NVE4 849 aa14.63□□□□□ -0.07
USP41-202ENST00000454608 TMOD3Q9NYL9 352 aa14.63□□□□□ -0.07
USP41-202ENST00000454608 SPG7Q9UQ90 795 aa14.63□□□□□ -0.07
USP41-202ENST00000454608 KDM2BQ8NHM5 1336 aa14.63□□□□□ -0.07
USP41-202ENST00000454608 FCHSD2O94868 740 aa14.62□□□□□ -0.07
USP41-202ENST00000454608 PRELPP51888 382 aa14.62□□□□□ -0.07
USP41-202ENST00000454608 NCAPD2Q15021 1401 aa14.62□□□□□ -0.07
USP41-202ENST00000454608 TNS4Q8IZW8 715 aa14.62□□□□□ -0.07
USP41-202ENST00000454608 GGNBP2Q9H3C7 697 aa14.62□□□□□ -0.07
USP41-202ENST00000454608 ADRA2BP18089 450 aa14.61□□□□□ -0.07
USP41-202ENST00000454608 TMF1P82094 1093 aa14.61□□□□□ -0.07
USP41-202ENST00000454608 ITPK1Q13572 414 aa14.61□□□□□ -0.07
USP41-202ENST00000454608 TRAPPC3LQ5T215 181 aa14.61□□□□□ -0.07
USP41-202ENST00000454608 TESK2Q96S53 571 aa14.61□□□□□ -0.07
USP41-202ENST00000454608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.61□□□□□ -0.07
USP41-202ENST00000454608 RTCBQ9Y3I0 505 aaKnown RBP14.61□□□□□ -0.07
USP41-202ENST00000454608 SBF1O95248 1867 aa14.61□□□□□ -0.07
USP41-202ENST00000454608 DPEP1P16444 411 aa14.6□□□□□ -0.07
USP41-202ENST00000454608 C9orf131Q5VYM1 1079 aa14.6□□□□□ -0.07
USP41-202ENST00000454608 COL5A3P25940 1745 aaPredicted RBP14.59□□□□□ -0.07
USP41-202ENST00000454608 CAPN15O75808 1086 aa14.59□□□□□ -0.07
USP41-202ENST00000454608 ASAP1Q9ULH1 1129 aa14.59□□□□□ -0.07
USP41-202ENST00000454608 ANKRD26Q9UPS8 1709 aa14.58□□□□□ -0.07
USP41-202ENST00000454608 KCPQ6ZWJ8 1503 aa14.58□□□□□ -0.08
USP41-202ENST00000454608 HTRA3P83110 453 aa14.58□□□□□ -0.08
USP41-202ENST00000454608 RC3H1Q5TC82 1133 aaKnown RBP14.58□□□□□ -0.08
USP41-202ENST00000454608 IFNL2Q8IZJ0 200 aa14.58□□□□□ -0.08
USP41-202ENST00000454608 PIM2Q9P1W9 311 aa14.58□□□□□ -0.08
USP41-202ENST00000454608 PARP3Q9Y6F1 533 aa14.58□□□□□ -0.08
USP41-202ENST00000454608 TONSLQ96HA7 1378 aa14.58□□□□□ -0.08
USP41-202ENST00000454608 ST20-MTHFSA0A0A6YYL1 179 aa14.57□□□□□ -0.08
USP41-202ENST00000454608 SMC1BQ8NDV3 1235 aa14.57□□□□□ -0.08
USP41-202ENST00000454608 ATG3Q9NT62 314 aa14.57□□□□□ -0.08
USP41-202ENST00000454608 KDRP35968 1356 aa14.57□□□□□ -0.08
USP41-202ENST00000454608 GYS1P13807 737 aa14.56□□□□□ -0.08
USP41-202ENST00000454608 KCNA3P22001 575 aa14.56□□□□□ -0.08
USP41-202ENST00000454608 RFC4P35249 363 aa14.56□□□□□ -0.08
USP41-202ENST00000454608 ARHGEF1Q92888 912 aaKnown RBP14.56□□□□□ -0.08
USP41-202ENST00000454608 DCAF5Q96JK2 942 aa14.56□□□□□ -0.08
USP41-202ENST00000454608 PHKG2P15735 406 aa14.55□□□□□ -0.08
USP41-202ENST00000454608 DALRD3Q5D0E6 543 aaKnown RBP14.55□□□□□ -0.08
USP41-202ENST00000454608 RRAGCQ9HB90 399 aa14.55□□□□□ -0.08
USP41-202ENST00000454608 RNF181Q9P0P0 153 aa14.55□□□□□ -0.08
USP41-202ENST00000454608 CNTNAP4Q9C0A0 1308 aa14.55□□□□□ -0.08
USP41-202ENST00000454608 ZC3H4Q9UPT8 1303 aaKnown RBP14.55□□□□□ -0.08
USP41-202ENST00000454608 RPS6KA4O75676 772 aa14.54□□□□□ -0.08
USP41-202ENST00000454608 MYH14Q7Z406 1995 aaKnown RBP14.54□□□□□ -0.08
USP41-202ENST00000454608 EMILIN1Q9Y6C2 1016 aa14.53□□□□□ -0.08
USP41-202ENST00000454608 PCNTO95613 3336 aa14.52□□□□□ -0.08
USP41-202ENST00000454608 WASHC2AQ641Q2 1341 aa14.52□□□□□ -0.08
USP41-202ENST00000454608 ERVV-2B6SEH9 535 aa14.52□□□□□ -0.09
USP41-202ENST00000454608 EYA1Q99502 592 aa14.52□□□□□ -0.09
USP41-202ENST00000454608 CDCA8Q53HL2 280 aa14.51□□□□□ -0.09
USP41-202ENST00000454608 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
USP41-202ENST00000454608 PPM1GO15355 546 aaPredicted RBP14.5□□□□□ -0.09
USP41-202ENST00000454608 HSP90AB1P08238 724 aaKnown RBP14.5□□□□□ -0.09
USP41-202ENST00000454608 HSPA1AP0DMV8 641 aaKnown RBP14.5□□□□□ -0.09
USP41-202ENST00000454608 HSPA1BP0DMV9 641 aaKnown RBP14.5□□□□□ -0.09
USP41-202ENST00000454608 SLC4A9Q96Q91 983 aa14.5□□□□□ -0.09
USP41-202ENST00000454608 CCDC88AQ3V6T2 1871 aa14.5□□□□□ -0.09
USP41-202ENST00000454608 VEGFAP15692 232 aaPredicted RBP14.49□□□□□ -0.09
USP41-202ENST00000454608 KDM6AO15550 1401 aaPredicted RBP14.48□□□□□ -0.09
USP41-202ENST00000454608 DLEC1Q9Y238 1755 aa14.47□□□□□ -0.09
USP41-202ENST00000454608 USP42Q9H9J4 1324 aaKnown RBP14.47□□□□□ -0.09
USP41-202ENST00000454608 GLTPD2A6NH11 291 aa14.47□□□□□ -0.09
USP41-202ENST00000454608 TIAM2Q8IVF5 1701 aa14.46□□□□□ -0.09
USP41-202ENST00000454608 LMNB1P20700 586 aa14.45□□□□□ -0.1
USP41-202ENST00000454608 CHRNA5P30532 468 aa14.45□□□□□ -0.1
USP41-202ENST00000454608 DDR1Q08345 913 aa14.45□□□□□ -0.1
USP41-202ENST00000454608 FKBP8Q14318 412 aa14.45□□□□□ -0.1
USP41-202ENST00000454608 CARD14Q9BXL6 1004 aa14.45□□□□□ -0.1
USP41-202ENST00000454608 AFDNP55196 1824 aaKnown RBP14.45□□□□□ -0.1
USP41-202ENST00000454608 TJP1Q07157 1748 aa14.44□□□□□ -0.1
USP41-202ENST00000454608 TM4SF1P30408 202 aa14.44□□□□□ -0.1
USP41-202ENST00000454608 CRKLP46109 303 aaKnown RBP14.44□□□□□ -0.1
USP41-202ENST00000454608 CABP4P57796 275 aa14.44□□□□□ -0.1
USP41-202ENST00000454608 ADAMTS7Q9UKP4 1686 aa14.44□□□□□ -0.1
USP41-202ENST00000454608 DICER1Q9UPY3 1922 aaKnown RBP14.43□□□□□ -0.1
USP41-202ENST00000454608 POLRMTO00411 1230 aaKnown RBP14.43□□□□□ -0.1
USP41-202ENST00000454608 AMOTQ4VCS5 1084 aa14.43□□□□□ -0.1
USP41-202ENST00000454608 PLEKHO1Q53GL0 409 aaPredicted RBP14.43□□□□□ -0.1
USP41-202ENST00000454608 POLKQ9UBT6 870 aa14.43□□□□□ -0.1
USP41-202ENST00000454608 SRP68Q9UHB9 627 aaKnown RBP14.43□□□□□ -0.1
USP41-202ENST00000454608 NRXN2Q9P2S2 1712 aa14.43□□□□□ -0.1
USP41-202ENST00000454608 RASSF7Q02833 373 aa14.42□□□□□ -0.1
USP41-202ENST00000454608 EIF4A2Q14240 407 aaKnown RBP14.42□□□□□ -0.1
USP41-202ENST00000454608 PTCD1O75127 700 aaKnown RBP14.41□□□□□ -0.1
USP41-202ENST00000454608 ZPR1O75312 459 aa14.41□□□□□ -0.1
USP41-202ENST00000454608 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
USP41-202ENST00000454608 ZNF530Q6P9A1 599 aaPredicted RBP14.4□□□□□ -0.1
USP41-202ENST00000454608 SCN11AQ9UI33 1791 aa14.39□□□□□ -0.11
USP41-202ENST00000454608 MTHFSP49914 203 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms