RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 DPEP1P16444 411 aa9.78□□□□□ -0.84
CHEK2-220ENST00000454252 EIF4A2Q14240 407 aaKnown RBP9.78□□□□□ -0.84
CHEK2-220ENST00000454252 POLKQ9UBT6 870 aa9.78□□□□□ -0.84
CHEK2-220ENST00000454252 WASHC2AQ641Q2 1341 aa9.78□□□□□ -0.84
CHEK2-220ENST00000454252 KIF24Q5T7B8 1368 aa9.77□□□□□ -0.84
CHEK2-220ENST00000454252 ARHGAP27Q6ZUM4 889 aa9.77□□□□□ -0.85
CHEK2-220ENST00000454252 POLR3GLQ9BT43 218 aa9.77□□□□□ -0.85
CHEK2-220ENST00000454252 RBM42Q9BTD8 480 aaKnown RBP9.77□□□□□ -0.85
CHEK2-220ENST00000454252 CICQ96RK0 1608 aaPredicted RBP9.77□□□□□ -0.85
CHEK2-220ENST00000454252 C10orf71Q711Q0 1435 aa9.76□□□□□ -0.85
CHEK2-220ENST00000454252 GYS1P13807 737 aa9.76□□□□□ -0.85
CHEK2-220ENST00000454252 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
CHEK2-220ENST00000454252 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
CHEK2-220ENST00000454252 SRP68Q9UHB9 627 aaKnown RBP9.76□□□□□ -0.85
CHEK2-220ENST00000454252 PKD1L3Q7Z443 1732 aa9.76□□□□□ -0.85
CHEK2-220ENST00000454252 MAP2P11137 1827 aaKnown RBP9.75□□□□□ -0.85
CHEK2-220ENST00000454252 TAF1LQ8IZX4 1826 aa9.75□□□□□ -0.85
CHEK2-220ENST00000454252 KDM6AO15550 1401 aaPredicted RBP9.75□□□□□ -0.85
CHEK2-220ENST00000454252 UBR3Q6ZT12 1888 aa9.75□□□□□ -0.85
CHEK2-220ENST00000454252 KCNA3P22001 575 aa9.75□□□□□ -0.85
CHEK2-220ENST00000454252 TRAPPC3LQ5T215 181 aa9.75□□□□□ -0.85
CHEK2-220ENST00000454252 AEBP1Q8IUX7 1158 aa9.75□□□□□ -0.85
CHEK2-220ENST00000454252 DNAJC5GQ8N7S2 189 aa9.75□□□□□ -0.85
CHEK2-220ENST00000454252 RTCBQ9Y3I0 505 aaKnown RBP9.75□□□□□ -0.85
CHEK2-220ENST00000454252 PCNTO95613 3336 aa9.74□□□□□ -0.85
CHEK2-220ENST00000454252 PTCD1O75127 700 aaKnown RBP9.74□□□□□ -0.85
CHEK2-220ENST00000454252 FCHSD2O94868 740 aa9.74□□□□□ -0.85
CHEK2-220ENST00000454252 DDR1Q08345 913 aa9.74□□□□□ -0.85
CHEK2-220ENST00000454252 FKBP8Q14318 412 aa9.74□□□□□ -0.85
CHEK2-220ENST00000454252 C9orf131Q5VYM1 1079 aa9.74□□□□□ -0.85
CHEK2-220ENST00000454252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.74□□□□□ -0.852e-11■■■□□ 17.1
CHEK2-220ENST00000454252 KIF20BQ96Q89 1820 aa9.73□□□□□ -0.85
CHEK2-220ENST00000454252 SLC24A1O60721 1099 aa9.73□□□□□ -0.85
CHEK2-220ENST00000454252 TOMM70O94826 608 aa9.73□□□□□ -0.85
CHEK2-220ENST00000454252 CHRNA5P30532 468 aa9.73□□□□□ -0.85
CHEK2-220ENST00000454252 RFC4P35249 363 aa9.73□□□□□ -0.85
CHEK2-220ENST00000454252 APLP1P51693 650 aa9.73□□□□□ -0.85
CHEK2-220ENST00000454252 TGFB2P61812 414 aa9.73□□□□□ -0.85
CHEK2-220ENST00000454252 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
CHEK2-220ENST00000454252 CCER1Q8TC90 406 aaPredicted RBP9.73□□□□□ -0.85
CHEK2-220ENST00000454252 KIAA1551Q9HCM1 1747 aa9.73□□□□□ -0.85
CHEK2-220ENST00000454252 ITGB4P16144 1822 aa9.72□□□□□ -0.85
CHEK2-220ENST00000454252 ZNF530Q6P9A1 599 aaPredicted RBP9.72□□□□□ -0.85
CHEK2-220ENST00000454252 NLGN1Q8N2Q7 840 aa9.72□□□□□ -0.85
CHEK2-220ENST00000454252 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
CHEK2-220ENST00000454252 CNTNAP4Q9C0A0 1308 aa9.72□□□□□ -0.85
CHEK2-220ENST00000454252 ERVV-2B6SEH9 535 aa9.71□□□□□ -0.86
CHEK2-220ENST00000454252 RPS6KA4O75676 772 aa9.71□□□□□ -0.86
CHEK2-220ENST00000454252 HMGB2P26583 209 aaKnown RBP9.71□□□□□ -0.86
CHEK2-220ENST00000454252 CRKLP46109 303 aaKnown RBP9.71□□□□□ -0.86
CHEK2-220ENST00000454252 CABP4P57796 275 aa9.71□□□□□ -0.86
CHEK2-220ENST00000454252 PARP3Q9Y6F1 533 aa9.71□□□□□ -0.86
CHEK2-220ENST00000454252 KCPQ6ZWJ8 1503 aa9.71□□□□□ -0.86
CHEK2-220ENST00000454252 RASSF7Q02833 373 aa9.7□□□□□ -0.86
CHEK2-220ENST00000454252 COL13A1Q5TAT6 717 aaPredicted RBP9.7□□□□□ -0.86
CHEK2-220ENST00000454252 RC3H1Q5TC82 1133 aaKnown RBP9.7□□□□□ -0.86
CHEK2-220ENST00000454252 NFATC2IPQ8NCF5 419 aa9.7□□□□□ -0.86
CHEK2-220ENST00000454252 DCAF5Q96JK2 942 aa9.7□□□□□ -0.86
CHEK2-220ENST00000454252 RNF181Q9P0P0 153 aa9.7□□□□□ -0.86
CHEK2-220ENST00000454252 ANKRD26Q9UPS8 1709 aa9.7□□□□□ -0.86
CHEK2-220ENST00000454252 N4BP2Q86UW6 1770 aaPredicted RBP9.7□□□□□ -0.86
CHEK2-220ENST00000454252 CAPN15O75808 1086 aa9.69□□□□□ -0.86
CHEK2-220ENST00000454252 MTHFSP49914 203 aa9.69□□□□□ -0.86
CHEK2-220ENST00000454252 PRELPP51888 382 aa9.69□□□□□ -0.86
CHEK2-220ENST00000454252 DALRD3Q5D0E6 543 aaKnown RBP9.69□□□□□ -0.86
CHEK2-220ENST00000454252 INTS5Q6P9B9 1019 aaKnown RBP9.69□□□□□ -0.86
CHEK2-220ENST00000454252 USP42Q9H9J4 1324 aaKnown RBP9.69□□□□□ -0.86
CHEK2-220ENST00000454252 RRAGCQ9HB90 399 aa9.69□□□□□ -0.86
CHEK2-220ENST00000454252 C4AP0C0L4 1744 aa9.68□□□□□ -0.86
CHEK2-220ENST00000454252 POLRMTO00411 1230 aaKnown RBP9.68□□□□□ -0.86
CHEK2-220ENST00000454252 PLEKHO1Q53GL0 409 aaPredicted RBP9.68□□□□□ -0.86
CHEK2-220ENST00000454252 DNAJC10Q8IXB1 793 aa9.68□□□□□ -0.86
CHEK2-220ENST00000454252 RBM46Q8TBY0 533 aaKnown RBP9.68□□□□□ -0.86
CHEK2-220ENST00000454252 PANK3Q9H999 370 aa9.68□□□□□ -0.86
CHEK2-220ENST00000454252 PIM2Q9P1W9 311 aa9.68□□□□□ -0.86
CHEK2-220ENST00000454252 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
CHEK2-220ENST00000454252 SLC39A6Q13433 755 aa9.67□□□□□ -0.86
CHEK2-220ENST00000454252 USPL1Q5W0Q7 1092 aa9.67□□□□□ -0.86
CHEK2-220ENST00000454252 SULT6B1Q6IMI4 303 aa9.67□□□□□ -0.86
CHEK2-220ENST00000454252 KLRG1Q96E93 195 aa9.67□□□□□ -0.86
CHEK2-220ENST00000454252 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
CHEK2-220ENST00000454252 C1orf141Q5JVX7 400 aa9.66□□□□□ -0.86
CHEK2-220ENST00000454252 C16orf71Q8IYS4 520 aaPredicted RBP9.66□□□□□ -0.86
CHEK2-220ENST00000454252 LGR6Q9HBX8 967 aa9.66□□□□□ -0.86
CHEK2-220ENST00000454252 KIF13BQ9NQT8 1826 aa9.66□□□□□ -0.86
CHEK2-220ENST00000454252 CARMIL3Q8ND23 1372 aa9.65□□□□□ -0.86
CHEK2-220ENST00000454252 TM4SF1P30408 202 aa9.65□□□□□ -0.86
CHEK2-220ENST00000454252 NFIXQ14938 502 aa9.65□□□□□ -0.86
CHEK2-220ENST00000454252 AMOTQ4VCS5 1084 aa9.65□□□□□ -0.86
CHEK2-220ENST00000454252 BCL2L12Q9HB09 334 aa9.65□□□□□ -0.86
CHEK2-220ENST00000454252 ZBTB1Q9Y2K1 713 aa9.65□□□□□ -0.86
CHEK2-220ENST00000454252 COL5A3P25940 1745 aaPredicted RBP9.65□□□□□ -0.87
CHEK2-220ENST00000454252 PLEKHG2Q9H7P9 1386 aa9.64□□□□□ -0.87
CHEK2-220ENST00000454252 SOS1Q07889 1333 aaPredicted RBP9.64□□□□□ -0.87
CHEK2-220ENST00000454252 HSPA5P11021 654 aaKnown RBP9.64□□□□□ -0.87
CHEK2-220ENST00000454252 IL13P35225 146 aa9.64□□□□□ -0.87
CHEK2-220ENST00000454252 CCDC24Q8N4L8 307 aa9.64□□□□□ -0.87
CHEK2-220ENST00000454252 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
CHEK2-220ENST00000454252 KDM2BQ8NHM5 1336 aa9.63□□□□□ -0.87
CHEK2-220ENST00000454252 HMOX1P09601 288 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms