RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 CACNA1FO60840 1977 aa27.18■■□□□ 1.94
CTU2-202ENST00000453996 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
CTU2-202ENST00000453996 BTG4Q9NY30 223 aa27.17■■□□□ 1.94
CTU2-202ENST00000453996 ABCC4O15439 1325 aa27.17■■□□□ 1.94
CTU2-202ENST00000453996 UBAP1LF5GYI3 381 aa27.17■■□□□ 1.94
CTU2-202ENST00000453996 PLCH1Q4KWH8 1693 aa27.16■■□□□ 1.94
CTU2-202ENST00000453996 MRC1P22897 1456 aa27.15■■□□□ 1.94
CTU2-202ENST00000453996 PTPRCP08575 1304 aa27.15■■□□□ 1.94
CTU2-202ENST00000453996 CYP27B1O15528 508 aa27.14■■□□□ 1.94
CTU2-202ENST00000453996 HSP90AB1P08238 724 aaKnown RBP27.14■■□□□ 1.94
CTU2-202ENST00000453996 IL2RBP14784 551 aa27.14■■□□□ 1.94
CTU2-202ENST00000453996 EIF4A1P60842 406 aaKnown RBP27.14■■□□□ 1.94
CTU2-202ENST00000453996 CCDC30Q5VVM6 783 aa27.14■■□□□ 1.94
CTU2-202ENST00000453996 STK31Q9BXU1 1019 aa27.14■■□□□ 1.94
CTU2-202ENST00000453996 SHANK3Q9BYB0 1731 aa27.14■■□□□ 1.94
CTU2-202ENST00000453996 SLC4A2P04920 1241 aa27.14■■□□□ 1.93
CTU2-202ENST00000453996 PCDH11XQ9BZA7 1347 aa27.14■■□□□ 1.93
CTU2-202ENST00000453996 PCDH11YQ9BZA8 1340 aa27.14■■□□□ 1.93
CTU2-202ENST00000453996 DCAF5Q96JK2 942 aa27.13■■□□□ 1.93
CTU2-202ENST00000453996 HOXB7P09629 217 aa27.12■■□□□ 1.93
CTU2-202ENST00000453996 ZCRB1Q8TBF4 217 aaKnown RBP27.12■■□□□ 1.93
CTU2-202ENST00000453996 RGS12O14924 1447 aa27.12■■□□□ 1.93
CTU2-202ENST00000453996 SLC52A2Q9HAB3 445 aa27.12■■□□□ 1.93
CTU2-202ENST00000453996 KCNQ3O43525 872 aa27.1■■□□□ 1.93
CTU2-202ENST00000453996 CHMP4BQ9H444 224 aaKnown RBP27.1■■□□□ 1.93
CTU2-202ENST00000453996 TSHZ2Q9NRE2 1034 aa27.1■■□□□ 1.93
CTU2-202ENST00000453996 CHMP4AQ9BY43 222 aa27.09■■□□□ 1.93
CTU2-202ENST00000453996 PCDHB15Q9Y5E8 787 aa27.09■■□□□ 1.93
CTU2-202ENST00000453996 HDGFL1Q5TGJ6 251 aa27.09■■□□□ 1.93
CTU2-202ENST00000453996 NRAPQ86VF7 1730 aa27.08■■□□□ 1.93
CTU2-202ENST00000453996 ZBTB40Q9NUA8 1239 aa27.08■■□□□ 1.93
CTU2-202ENST00000453996 WNK3Q9BYP7 1800 aa27.07■■□□□ 1.92
CTU2-202ENST00000453996 IGHDP01880 384 aa27.07■■□□□ 1.92
CTU2-202ENST00000453996 NECTIN2Q92692 538 aa27.06■■□□□ 1.92
CTU2-202ENST00000453996 HEG1Q9ULI3 1381 aa27.06■■□□□ 1.92
CTU2-202ENST00000453996 G2E3Q7L622 706 aa27.05■■□□□ 1.92
CTU2-202ENST00000453996 USP35Q9P2H5 1018 aa27.05■■□□□ 1.92
CTU2-202ENST00000453996 NWD2Q9ULI1 1742 aa27.05■■□□□ 1.92
CTU2-202ENST00000453996 ADAMTS2O95450 1211 aa27.04■■□□□ 1.92
CTU2-202ENST00000453996 INTS3Q68E01 1043 aaKnown RBP27.04■■□□□ 1.92
CTU2-202ENST00000453996 NFATC2IPQ8NCF5 419 aa27.04■■□□□ 1.92
CTU2-202ENST00000453996 RWDD1Q9H446 243 aaPredicted RBP27.04■■□□□ 1.92
CTU2-202ENST00000453996 ZBTB7BO15156 539 aaPredicted RBP27.03■■□□□ 1.92
CTU2-202ENST00000453996 DISP2A7MBM2 1401 aa27.03■■□□□ 1.92
CTU2-202ENST00000453996 FLIIQ13045 1269 aa27.02■■□□□ 1.92
CTU2-202ENST00000453996 ZNF790Q6PG37 636 aa27.02■■□□□ 1.92
CTU2-202ENST00000453996 N4BP2Q86UW6 1770 aaPredicted RBP27.02■■□□□ 1.92
CTU2-202ENST00000453996 NUTM2BA6NNL0 878 aaPredicted RBP27.01■■□□□ 1.91
CTU2-202ENST00000453996 NUTM2EB1AL46 878 aaPredicted RBP27.01■■□□□ 1.91
CTU2-202ENST00000453996 GIGYF1O75420 1035 aaPredicted RBP27.01■■□□□ 1.91
CTU2-202ENST00000453996 EIF2S2P20042 333 aaKnown RBP27.01■■□□□ 1.91
CTU2-202ENST00000453996 CABP4P57796 275 aa27.01■■□□□ 1.91
CTU2-202ENST00000453996 NKX1-1Q15270 411 aaPredicted RBP27.01■■□□□ 1.91
CTU2-202ENST00000453996 NUTM2AQ8IVF1 878 aaPredicted RBP27.01■■□□□ 1.91
CTU2-202ENST00000453996 C5P01031 1676 aa27.01■■□□□ 1.91
CTU2-202ENST00000453996 CERKQ8TCT0 537 aa26.99■■□□□ 1.91
CTU2-202ENST00000453996 SLC39A6Q13433 755 aa26.98■■□□□ 1.91
CTU2-202ENST00000453996 FKBP5Q13451 457 aaPredicted RBP26.98■■□□□ 1.91
CTU2-202ENST00000453996 DDX54Q8TDD1 881 aaKnown RBP26.98■■□□□ 1.91
CTU2-202ENST00000453996 JCADQ9P266 1359 aa26.98■■□□□ 1.91
CTU2-202ENST00000453996 ERVV-2B6SEH9 535 aa26.97■■□□□ 1.91
CTU2-202ENST00000453996 HDAC1Q13547 482 aaPredicted RBP26.97■■□□□ 1.91
CTU2-202ENST00000453996 TOGARAM1Q9Y4F4 1720 aa26.97■■□□□ 1.91
CTU2-202ENST00000453996 PXDNLA1KZ92 1463 aa26.97■■□□□ 1.91
CTU2-202ENST00000453996 TTC5Q8N0Z6 440 aa26.97■■□□□ 1.91
CTU2-202ENST00000453996 CHPF2Q9P2E5 772 aa26.97■■□□□ 1.91
CTU2-202ENST00000453996 PAPPAQ13219 1627 aa26.96■■□□□ 1.91
CTU2-202ENST00000453996 CCT4P50991 539 aaKnown RBP26.95■■□□□ 1.9
CTU2-202ENST00000453996 SLIT2O94813 1529 aa26.95■■□□□ 1.9
CTU2-202ENST00000453996 UBR2Q8IWV8 1755 aa26.94■■□□□ 1.9
CTU2-202ENST00000453996 F6X3S4 739 aa26.94■■□□□ 1.9
CTU2-202ENST00000453996 SKAP1Q86WV1 359 aa26.94■■□□□ 1.9
CTU2-202ENST00000453996 DBF4Q9UBU7 674 aaPredicted RBP26.94■■□□□ 1.9
CTU2-202ENST00000453996 SLC4A10Q6U841 1118 aa26.93■■□□□ 1.9
CTU2-202ENST00000453996 LAMB4A4D0S4 1761 aa26.93■■□□□ 1.9
CTU2-202ENST00000453996 PHAXQ9H814 394 aaKnown RBP26.92■■□□□ 1.9
CTU2-202ENST00000453996 GLI3P10071 1580 aa26.92■■□□□ 1.9
CTU2-202ENST00000453996 SPATA31A1Q5TZJ5 1347 aa26.92■■□□□ 1.9
CTU2-202ENST00000453996 PRAMEF22A3QJZ6 481 aa26.92■■□□□ 1.9
CTU2-202ENST00000453996 ZNF496Q96IT1 587 aaPredicted RBP26.92■■□□□ 1.9
CTU2-202ENST00000453996 FMNL2Q96PY5 1086 aa26.92■■□□□ 1.9
CTU2-202ENST00000453996 C1orf115Q9H7X2 142 aa26.91■■□□□ 1.9
CTU2-202ENST00000453996 THRAP3Q9Y2W1 955 aaKnown RBP26.91■■□□□ 1.9
CTU2-202ENST00000453996 TNS2Q63HR2 1409 aa26.9■■□□□ 1.9
CTU2-202ENST00000453996 LRP6O75581 1613 aa26.89■■□□□ 1.9
CTU2-202ENST00000453996 CDCA7Q9BWT1 371 aaPredicted RBP26.89■■□□□ 1.9
CTU2-202ENST00000453996 SNRPA1P09661 255 aaKnown RBP26.88■■□□□ 1.89
CTU2-202ENST00000453996 ITGB4P16144 1822 aa26.87■■□□□ 1.89
CTU2-202ENST00000453996 EXOC5O00471 708 aa26.86■■□□□ 1.89
CTU2-202ENST00000453996 HYPKQ9NX55 129 aa26.86■■□□□ 1.89
CTU2-202ENST00000453996 SPATA31A5Q5VU36 1347 aa26.86■■□□□ 1.89
CTU2-202ENST00000453996 SPATA31A7Q8IWB4 1347 aa26.86■■□□□ 1.89
CTU2-202ENST00000453996 ANXA1P04083 346 aa26.86■■□□□ 1.89
CTU2-202ENST00000453996 DDX21Q9NR30 783 aaKnown RBP eCLIP26.86■■□□□ 1.89
CTU2-202ENST00000453996 KCPQ6ZWJ8 1503 aa26.86■■□□□ 1.89
CTU2-202ENST00000453996 SPATA31A6Q5VVP1 1343 aa26.85■■□□□ 1.89
CTU2-202ENST00000453996 MEIS3Q99687 375 aa26.85■■□□□ 1.89
CTU2-202ENST00000453996 RGS3P49796 1198 aa26.84■■□□□ 1.89
CTU2-202ENST00000453996 SMC5Q8IY18 1101 aa26.84■■□□□ 1.89
CTU2-202ENST00000453996 PROSER3Q2NL68 480 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms