RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
CSTF1-204ENST00000452950 MRGPRX2Q96LB1 330 aa9.66□□□□□ -0.86
CSTF1-204ENST00000452950 KIAA1024Q9UPX6 916 aa9.66□□□□□ -0.86
CSTF1-204ENST00000452950 KIF21AQ7Z4S6 1674 aa9.65□□□□□ -0.86
CSTF1-204ENST00000452950 NCLP19338 710 aaKnown RBP9.65□□□□□ -0.86
CSTF1-204ENST00000452950 FKBP4Q02790 459 aaKnown RBP eCLIP9.65□□□□□ -0.86
CSTF1-204ENST00000452950 PTCRAQ6ISU1 281 aaPredicted RBP9.65□□□□□ -0.86
CSTF1-204ENST00000452950 RGL4Q8IZJ4 473 aa9.65□□□□□ -0.86
CSTF1-204ENST00000452950 SCAMP3O14828 347 aaKnown RBP9.64□□□□□ -0.87
CSTF1-204ENST00000452950 ZBTB7BO15156 539 aaPredicted RBP9.64□□□□□ -0.87
CSTF1-204ENST00000452950 AVPP01185 164 aa9.64□□□□□ -0.87
CSTF1-204ENST00000452950 GTF2IP78347 998 aa9.64□□□□□ -0.87
CSTF1-204ENST00000452950 ARHGAP4P98171 946 aa9.64□□□□□ -0.87
CSTF1-204ENST00000452950 SNIP1Q8TAD8 396 aaKnown RBP9.64□□□□□ -0.87
CSTF1-204ENST00000452950 NUDT12Q9BQG2 462 aa9.64□□□□□ -0.87
CSTF1-204ENST00000452950 BACH2Q9BYV9 841 aa9.64□□□□□ -0.87
CSTF1-204ENST00000452950 DOLKQ9UPQ8 538 aa9.64□□□□□ -0.87
CSTF1-204ENST00000452950 CADPSQ9ULU8 1353 aa9.63□□□□□ -0.87
CSTF1-204ENST00000452950 SMARCA2P51531 1590 aa9.63□□□□□ -0.87
CSTF1-204ENST00000452950 SKOR1P84550 965 aa9.63□□□□□ -0.87
CSTF1-204ENST00000452950 ECM1Q16610 540 aa9.63□□□□□ -0.87
CSTF1-204ENST00000452950 RC3H1Q5TC82 1133 aaKnown RBP9.63□□□□□ -0.87
CSTF1-204ENST00000452950 NBPF14Q5TI25 921 aa9.63□□□□□ -0.87
CSTF1-204ENST00000452950 CCDC102BQ68D86 513 aa9.63□□□□□ -0.87
CSTF1-204ENST00000452950 OCSTAMPQ9BR26 566 aa9.63□□□□□ -0.87
CSTF1-204ENST00000452950 DNMT3AQ9Y6K1 912 aaPredicted RBP9.63□□□□□ -0.87
CSTF1-204ENST00000452950 HDLBPQ00341 1268 aaKnown RBP9.62□□□□□ -0.87
CSTF1-204ENST00000452950 MRPL58Q14197 206 aaKnown RBP9.62□□□□□ -0.87
CSTF1-204ENST00000452950 TSGA10IPQ3SY00 556 aa9.62□□□□□ -0.87
CSTF1-204ENST00000452950 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
CSTF1-204ENST00000452950 CRIPAKQ8N1N5 446 aa9.62□□□□□ -0.87
CSTF1-204ENST00000452950 TPCN2Q8NHX9 752 aa9.62□□□□□ -0.87
CSTF1-204ENST00000452950 MKNK1Q9BUB5 465 aa9.62□□□□□ -0.87
CSTF1-204ENST00000452950 SEPT3Q9UH03 358 aa9.62□□□□□ -0.87
CSTF1-204ENST00000452950 DACH1Q9UI36 760 aa9.62□□□□□ -0.87
CSTF1-204ENST00000452950 SFI1A8K8P3 1242 aa9.61□□□□□ -0.87
CSTF1-204ENST00000452950 SMPD1P17405 629 aa9.61□□□□□ -0.87
CSTF1-204ENST00000452950 WNT7BP56706 349 aa9.61□□□□□ -0.87
CSTF1-204ENST00000452950 ADAM32Q8TC27 787 aa9.61□□□□□ -0.87
CSTF1-204ENST00000452950 ZNF775Q96BV0 537 aaPredicted RBP9.61□□□□□ -0.87
CSTF1-204ENST00000452950 CHMP4AQ9BY43 222 aa9.61□□□□□ -0.87
CSTF1-204ENST00000452950 J3QL48 77 aa9.6□□□□□ -0.87
CSTF1-204ENST00000452950 AXIN1O15169 862 aa9.6□□□□□ -0.87
CSTF1-204ENST00000452950 PSME1Q06323 249 aa9.6□□□□□ -0.87
CSTF1-204ENST00000452950 MTMR3Q13615 1198 aa9.6□□□□□ -0.87
CSTF1-204ENST00000452950 HINFPQ9BQA5 517 aa9.6□□□□□ -0.87
CSTF1-204ENST00000452950 ARHGAP9Q9BRR9 750 aa9.6□□□□□ -0.87
CSTF1-204ENST00000452950 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
CSTF1-204ENST00000452950 P4HBP07237 508 aaKnown RBP9.59□□□□□ -0.87
CSTF1-204ENST00000452950 CCNYL3P0C7X3 344 aa9.59□□□□□ -0.87
CSTF1-204ENST00000452950 PIK3R5Q8WYR1 880 aa9.59□□□□□ -0.87
CSTF1-204ENST00000452950 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
CSTF1-204ENST00000452950 CTC1Q2NKJ3 1217 aa9.58□□□□□ -0.88
CSTF1-204ENST00000452950 C9orf131Q5VYM1 1079 aa9.58□□□□□ -0.88
CSTF1-204ENST00000452950 ZBTB33Q86T24 672 aa9.58□□□□□ -0.88
CSTF1-204ENST00000452950 EVA1BQ9NVM1 165 aa9.58□□□□□ -0.88
CSTF1-204ENST00000452950 NCAPD3P42695 1498 aa9.58□□□□□ -0.88
CSTF1-204ENST00000452950 SMCPP49901 116 aaPredicted RBP9.57□□□□□ -0.88
CSTF1-204ENST00000452950 DPH6Q7L8W6 267 aa9.57□□□□□ -0.88
CSTF1-204ENST00000452950 DZIP3Q86Y13 1208 aaKnown RBP9.57□□□□□ -0.88
CSTF1-204ENST00000452950 ANKRD13AQ8IZ07 590 aa9.57□□□□□ -0.88
CSTF1-204ENST00000452950 LGR5O75473 907 aa9.56□□□□□ -0.88
CSTF1-204ENST00000452950 ITGAEP38570 1179 aa9.56□□□□□ -0.88
CSTF1-204ENST00000452950 FKBP5Q13451 457 aaPredicted RBP9.56□□□□□ -0.88
CSTF1-204ENST00000452950 RBCK1Q9BYM8 510 aa9.56□□□□□ -0.88
CSTF1-204ENST00000452950 TANGO6Q9C0B7 1094 aa9.56□□□□□ -0.88
CSTF1-204ENST00000452950 ANKRD62A6NC57 917 aa9.55□□□□□ -0.88
CSTF1-204ENST00000452950 WEE1P30291 646 aa9.55□□□□□ -0.88
CSTF1-204ENST00000452950 FGD1P98174 961 aa9.55□□□□□ -0.88
CSTF1-204ENST00000452950 GIMAP6Q6P9H5 292 aa9.55□□□□□ -0.88
CSTF1-204ENST00000452950 HELQQ8TDG4 1101 aa9.55□□□□□ -0.88
CSTF1-204ENST00000452950 HPS1Q92902 700 aa9.55□□□□□ -0.88
CSTF1-204ENST00000452950 PCDHGA11Q9Y5H2 935 aa9.55□□□□□ -0.88
CSTF1-204ENST00000452950 FAM13AO94988 1023 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 ALDH1A1P00352 501 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 SH3BP2P78314 561 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 XPCQ01831 940 aaPredicted RBP9.54□□□□□ -0.88
CSTF1-204ENST00000452950 RAD51AP2Q09MP3 1159 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 CAPN12Q6ZSI9 719 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 TMC7Q7Z402 723 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 COL26A1Q96A83 441 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 UNC93B1Q9H1C4 597 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 GMPR2Q9P2T1 348 aaKnown RBP9.54□□□□□ -0.88
CSTF1-204ENST00000452950 ARHGEF11O15085 1522 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 DCAF1Q9Y4B6 1507 aa9.54□□□□□ -0.88
CSTF1-204ENST00000452950 SIAH2O43255 324 aa9.53□□□□□ -0.88
CSTF1-204ENST00000452950 NDUFB5O43674 189 aa9.53□□□□□ -0.88
CSTF1-204ENST00000452950 EIF5BO60841 1220 aaKnown RBP9.53□□□□□ -0.88
CSTF1-204ENST00000452950 TMEM87AQ8NBN3 555 aa9.53□□□□□ -0.88
CSTF1-204ENST00000452950 BAP1Q92560 729 aa9.53□□□□□ -0.88
CSTF1-204ENST00000452950 MRS2Q9HD23 443 aa9.53□□□□□ -0.88
CSTF1-204ENST00000452950 LAMC3Q9Y6N6 1575 aa9.53□□□□□ -0.88
CSTF1-204ENST00000452950 FMR1Q06787 632 aaKnown RBP eCLIP9.52□□□□□ -0.89
CSTF1-204ENST00000452950 RNF20Q5VTR2 975 aa9.52□□□□□ -0.89
CSTF1-204ENST00000452950 NT5DC4Q86YG4 428 aa9.52□□□□□ -0.89
CSTF1-204ENST00000452950 TSEN2Q8NCE0 465 aaKnown RBP9.52□□□□□ -0.89
CSTF1-204ENST00000452950 HIRIP3Q9BW71 556 aaPredicted RBP9.52□□□□□ -0.89
CSTF1-204ENST00000452950 M0R2N6 131 aa9.51□□□□□ -0.89
CSTF1-204ENST00000452950 TREHO43280 583 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms